Project measure / variable:   Schoonjans1   kidney_wt_HFD

ID, description, units MPD:112860   kidney_wt_HFD   kidney weight (both)   [g]  HFD  
high-fat diet study
Data set, strains Schoonjans1   BXD w/par   36 strains     sex: m     age: 29wks
Procedure organ weights
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Schoonjans1 - kidney weight (both) HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested36 strains
Mean of the strain means0.48451   g
Median of the strain means0.47255   g
SD of the strain means± 0.0787
Coefficient of variation (CV)0.1624
Min–max range of strain means0.3757   –   0.7525   g
Mean sample size per strain4.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 35 1.0043 0.0287 11.6998 < 0.0001
Residuals 140 0.3433 0.0025


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 0.378 0.02387   5 0.01068 0.0632 0.35, 0.41 -1.35
BXD100 m 0.46277 0.04619   7 0.01746 0.0998 0.4142, 0.536 -0.28
BXD11 m 0.46837 0.01616   3 0.00933208 0.0345 0.4526, 0.4849 -0.21
BXD12 m 0.445 0.04492   4 0.02246 0.1009 0.402, 0.507 -0.5
BXD27 m 0.4719 0.09737   5 0.04355 0.2063 0.31, 0.5553 -0.16
BXD32 m 0.465 0.1063   4 0.05315 0.2286 0.31, 0.55 -0.25
BXD34 m 0.7525 0.105   4 0.0525 0.1395 0.66, 0.9 3.41
BXD39 m 0.55254 0.06843   5 0.0306 0.1238 0.489, 0.6566 0.86
BXD40 m 0.4536 0.03836   5 0.01716 0.0846 0.4066, 0.5038 -0.39
BXD43 m 0.4106 0.04823   5 0.02157 0.1175 0.37, 0.49 -0.94
BXD45 m 0.496 0.03578   5 0.016 0.0721 0.46, 0.55 0.15
BXD48 m 0.38568 0.0252   5 0.01127 0.0653 0.3574, 0.4098 -1.26
BXD48a m 0.41302 0.03337   5 0.01492 0.0808 0.3815, 0.462 -0.91
BXD49 m 0.54968 0.02457   4 0.01229 0.0447 0.5235, 0.5823 0.83
BXD51 m 0.404 0.03578   5 0.016 0.0886 0.35, 0.45 -1.02
BXD53 m 0.5054 0.03509   5 0.01569 0.0694 0.4645, 0.5521 0.27
BXD55 m 0.57966 0.03512   5 0.01571 0.0606 0.5459, 0.6348 1.21
BXD6 m 0.382 0.04438   5 0.01985 0.1162 0.33, 0.44 -1.3
BXD62 m 0.58772 0.02887   5 0.01291 0.0491 0.5536, 0.6212 1.31
BXD63 m 0.51754 0.03592   5 0.01606 0.0694 0.4649, 0.5553 0.42
BXD64 m 0.458 0.03114   5 0.01393 0.068 0.42, 0.49 -0.34
BXD66 m 0.46989 0.05994   9 0.01998 0.1276 0.37, 0.5456 -0.19
BXD67 m 0.508 0.03633   5 0.01625 0.0715 0.48, 0.57 0.3
BXD69 m 0.58 0.08602   5 0.03847 0.1483 0.49, 0.71 1.21
BXD73 m 0.57686 0.05108   5 0.02284 0.0885 0.5181, 0.6364 1.17
BXD75 m 0.5191 0.03922   4 0.01961 0.0756 0.4826, 0.5559 0.44
BXD77 m 0.43646 0.03394   5 0.01518 0.0778 0.3962, 0.4846 -0.61
BXD79 m 0.51178 0.05021   5 0.02245 0.0981 0.4727, 0.5998 0.35
BXD8 m 0.50208 0.02   4 0.00999778 0.0398 0.4812, 0.5292 0.22
BXD81 m 0.3757 0.02568   5 0.01148 0.0683 0.3443, 0.4158 -1.38
BXD84 m 0.54 0.03674   5 0.01643 0.068 0.51, 0.6 0.71
BXD87 m 0.39172 0.0259   5 0.01158 0.0661 0.3709, 0.4297 -1.18
BXD89 m 0.4732 0.03737   5 0.01671 0.079 0.414, 0.506 -0.14
BXD90 m 0.49897 0.01925   3 0.01112 0.0386 0.4795, 0.518 0.18
C57BL/6J m 0.37764 0.03166   5 0.01416 0.0838 0.3488, 0.4318 -1.36
DBA/2J m 0.542 0.06723   5 0.03007 0.124 0.47, 0.63 0.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 0.378 0.0221470173 0.421785843 0.334214157
BXD100 m 0.4627714286 0.0187176459 0.4997772201 0.4257656371
BXD11 m 0.4683666667 0.0285916764 0.5248939469 0.4118393864
BXD12 m 0.445 0.0247611181 0.4939540607 0.3960459393
BXD27 m 0.4719 0.0221470173 0.515685843 0.428114157
BXD32 m 0.465 0.0247611181 0.5139540607 0.4160459393
BXD34 m 0.7525 0.0247611181 0.8014540607 0.7035459393
BXD39 m 0.55254 0.0221470173 0.596325843 0.508754157
BXD40 m 0.4536 0.0221470173 0.497385843 0.409814157
BXD43 m 0.4106 0.0221470173 0.454385843 0.366814157
BXD45 m 0.496 0.0221470173 0.539785843 0.452214157
BXD48 m 0.38568 0.0221470173 0.429465843 0.341894157
BXD48a m 0.41302 0.0221470173 0.456805843 0.369234157
BXD49 m 0.549675 0.0247611181 0.5986290607 0.5007209393
BXD51 m 0.404 0.0221470173 0.447785843 0.360214157
BXD53 m 0.5054 0.0221470173 0.549185843 0.461614157
BXD55 m 0.57966 0.0221470173 0.623445843 0.535874157
BXD6 m 0.382 0.0221470173 0.425785843 0.338214157
BXD62 m 0.58772 0.0221470173 0.631505843 0.543934157
BXD63 m 0.51754 0.0221470173 0.561325843 0.473754157
BXD64 m 0.458 0.0221470173 0.501785843 0.414214157
BXD66 m 0.4698888889 0.0165074121 0.5025249293 0.4372528484
BXD67 m 0.508 0.0221470173 0.551785843 0.464214157
BXD69 m 0.58 0.0221470173 0.623785843 0.536214157
BXD73 m 0.57686 0.0221470173 0.620645843 0.533074157
BXD75 m 0.5191 0.0247611181 0.5680540607 0.4701459393
BXD77 m 0.43646 0.0221470173 0.480245843 0.392674157
BXD79 m 0.51178 0.0221470173 0.555565843 0.467994157
BXD8 m 0.502075 0.0247611181 0.5510290607 0.4531209393
BXD81 m 0.3757 0.0221470173 0.419485843 0.331914157
BXD84 m 0.54 0.0221470173 0.583785843 0.496214157
BXD87 m 0.39172 0.0221470173 0.435505843 0.347934157
BXD89 m 0.4732 0.0221470173 0.516985843 0.429414157
BXD90 m 0.4989666667 0.0285916764 0.5554939469 0.4424393864
C57BL/6J m 0.37764 0.0221470173 0.421425843 0.333854157
DBA/2J m 0.542 0.0221470173 0.585785843 0.498214157




  GWAS USING LINEAR MIXED MODELS