MPD: Phenotype measures mapped to VT:0000428, craniofacial morphology trait

Phenotype measures in JaxKOMP-EAP associated with ontology term
VT:0000428 'craniofacial morphology trait'

All measures in this list are mapped to the ontology descendants of VT:0000428. None are mapped to VT:0000428 directly.

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
JaxKOMP-EAP:75	JaxKOMP-EAP	observation (SHIRPA)	(none)	eye morphology eyes 100369 categorical	KOMP		both	9wks		2021

JaxKOMP-EAP:77	JaxKOMP-EAP	observation (SHIRPA)	(none)	snout size snout_size 100371 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:119	JaxKOMP-EAP	observation (SHIRPA)	(none)	mouth morphology mouth_morphology 100413 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:120	JaxKOMP-EAP	observation (SHIRPA)	(none)	upper lip morphology upper_lip_morphology 100414 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:125	JaxKOMP-EAP	observation (SHIRPA)	(none)	lower lip morphology lower_lip_morphology 100419 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:275	JaxKOMP-EAP	ophthalmoscopy	(none)	eyes (present, absent) eye 100600 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:276	JaxKOMP-EAP	ophthalmoscopy	(none)	bulging eye bulging_eye 100601 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:277	JaxKOMP-EAP	ophthalmoscopy	(none)	eye hemorrhage or blood presence eye_hemorrhage eye_hemorrhage_or_blood_presence 100602 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:278	JaxKOMP-EAP	ophthalmoscopy	(none)	eyelid morphology eyelid_morphology 100603 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:279	JaxKOMP-EAP	ophthalmoscopy	(none)	eye closure eye_closure 100604 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:280	JaxKOMP-EAP	ophthalmoscopy	(none)	narrow eye opening narrow_eye_opening 100605 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:283	JaxKOMP-EAP	ophthalmoscopy	(none)	pupil position pupil_position 100608 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:284	JaxKOMP-EAP	ophthalmoscopy	(none)	pupil shape pupil_shape 100609 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:285	JaxKOMP-EAP	ophthalmoscopy	(none)	pupil dilation pupil_dilation 100610 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:287	JaxKOMP-EAP	ophthalmoscopy	(none)	iris pigmentation iris_pigmentation 100612 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:288	JaxKOMP-EAP	slit lamp	(none)	lens lens 100613 categorical	KOMP	2018	both	14wks		2021

JaxKOMP-EAP:289	JaxKOMP-EAP	slit lamp	(none)	lens opacity lens_opacity 100614 categorical	KOMP	2024	both	14wks		2021

JaxKOMP-EAP:291	JaxKOMP-EAP	slit lamp	(none)	synechia synechia 100616 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:292	JaxKOMP-EAP	ophthalmoscopy	(none)	retina retina 100617 categorical	KOMP	2013	both	14wks		2021

JaxKOMP-EAP:293	JaxKOMP-EAP	ophthalmoscopy	(none)	retinal pigmentation retinal_pigmentation 100618 categorical	KOMP	2010	both	14wks		2021

JaxKOMP-EAP:294	JaxKOMP-EAP	ophthalmoscopy	(none)	retinal structure retinal_structure 100619 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:295	JaxKOMP-EAP	ophthalmoscopy	(none)	optic disc optic_disc 100620 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:296	JaxKOMP-EAP	ophthalmoscopy	(none)	retinal blood vessels retinal_blood_vessels 100621 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:298	JaxKOMP-EAP	ophthalmoscopy	(none)	retinal blood vessels pattern retinal_blood_vessels_pattern 100623 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:299	JaxKOMP-EAP	ophthalmoscopy	(none)	retinal blood vessels structure retinal_blood_vessels_structure 100625 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:300	JaxKOMP-EAP	slit lamp	(none)	cornea opacity cornea_opacity 100627 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:301	JaxKOMP-EAP	slit lamp	(none)	cornea vascularization cornea_vascularization 100628 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:302	JaxKOMP-EAP	slit lamp	(none)	corneal scleralization corneal_scleralization 100629 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:303	JaxKOMP-EAP	slit lamp	(none)	corneal deposits corneal_deposits 100630 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:304	JaxKOMP-EAP	slit lamp	(none)	iris transillumination iris_transillumination 100631 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:305	JaxKOMP-EAP	slit lamp	(none)	vitreous vitreous 100632 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-EAP:306	JaxKOMP-EAP	slit lamp	(none)	corneal mineralization corneal_mineralization 100633 categorical	KOMP	2013	both	14wks		2021

JaxKOMP-EAP:307	JaxKOMP-EAP	slit lamp	(none)	corneal ulcer corneal_ulcer 100634 categorical	KOMP	2013	both	14wks		2021

JaxKOMP-EAP:309	JaxKOMP-EAP	slit lamp	(none)	anterior chamber depth anterior_chamber_depth 100636 categorical	KOMP	1987	both	14wks		2021

JaxKOMP-EAP:342	JaxKOMP-EAP	X-ray	(none)	skull shape skull_shape 100676 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:344	JaxKOMP-EAP	X-ray	(none)	teeth teeth 100678 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:348	JaxKOMP-EAP	X-ray	(none)	zygomatic bone zygomatic_bone 100684 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:364	JaxKOMP-EAP	electroretinography	(none)	b-wave amplitude of cone photoreceptors [µV] cone_b_amplitude cone_b_wave_amplitude 100314 left right	KOMP	351	both	16wks	N=3	2016

JaxKOMP-EAP:366	JaxKOMP-EAP	electroretinography	(none)	b-wave implicit time of rod photoreceptors (interval from onset of stimulus to peak of the wave) [ms] cone_b_time cone_b_wave_implicit_time 100316 left right	KOMP	338	both	16wks	N=3	2016

JaxKOMP-EAP:368	JaxKOMP-EAP	electroretinography	(none)	a-wave amplitude of rod photoreceptors [µV] rod_a_amplitude rod_a_wave_amplitude 100318 left right	KOMP	356	both	16wks	N=3	2016

JaxKOMP-EAP:370	JaxKOMP-EAP	electroretinography	(none)	rod a wave implicit time rod_a_time rod_a_wave_implicit_time 100320 left right	KOMP	330	both	16wks	N=3	2016

JaxKOMP-EAP:372	JaxKOMP-EAP	electroretinography	(none)	b-wave amplitude of rod photoreceptors [µV] rod_b_amplitude rod_b_wave_amplitude 100322 left right	KOMP	357	both	16wks	N=3	2016

JaxKOMP-EAP:374	JaxKOMP-EAP	electroretinography	(none)	rod b wave implicit time rod_b_time rod_b_wave_implicit_time 100324 left right	KOMP	346	both	16wks	N=3	2016

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