MPD: Phenotype measures mapped to MP:0002160, abnormal reproductive system morphology

Phenotype measures in Shorter8 associated with ontology term
MP:0002160 'abnormal reproductive system morphology'

All measures in this list are mapped to the ontology descendants of MP:0002160. None are mapped to MP:0002160 directly.

MP:0002673 abnormal sperm number
MP:0004850 abnormal testis weight
MP:0004908 abnormal seminal vesicle weight
MP:0004926 abnormal epididymis size
MP:0006362 abnormal male germ cell morphology
MP:0008892 abnormal sperm flagellum morphology

This MP term has been mapped to these MPD phenotype measurements to help users find relevant data. It should be noted that MPD measurements typically have a mixture of high-end, low-end and "normal" readings.

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	Sex	Age	Sample Size (Avg)	Year
Shorter8:3	Shorter8	organ weights	(none)	testis weight [g] testis 110158 left right	DO population	m	12-15wks	N=150	2019

Shorter8:5	Shorter8	organ weights	(none)	testis weight mean [g] testis_mean 110160	DO population	m	12-15wks	N=150	2019

Shorter8:6	Shorter8	organ weights	(none)	testis weight as percentage of body weight [%] testis_pct_bw 110161	DO population	m	12-15wks	N=150	2019

Shorter8:7	Shorter8	organ weights	(none)	epididymis plus vas deferens weight [g] epidid_vd 110162 left right	DO population	m	12-15wks	N=150	2019

Shorter8:9	Shorter8	organ weights	(none)	epididymis plus vas deferens weight mean [g] epidid_vd_mean 110164	DO population	m	12-15wks	N=150	2019

Shorter8:10	Shorter8	organ weights	(none)	epididymis plus vas deferens weight as percentage of body weight [%] epidid_vd_pct_bw 110165	DO population	m	12-15wks	N=150	2019

Shorter8:11	Shorter8	organ weights	(none)	seminal vesicles weight total [g] semin_vesi_tot 110166	DO population	m	12-15wks	N=150	2019

Shorter8:12	Shorter8	organ weights	(none)	seminal vesicles weight as percentage of body weight [%] semin_vesi_pct_bw 110167	DO population	m	12-15wks	N=150	2019

Shorter8:13	Shorter8	sperm count	(none)	sperm count per mouse (x10⁶) [n] sperm_count 110168	DO population	m	12-15wks	N=150	2019

Shorter8:14	Shorter8	sperm count	(none)	sperm count per mg testis weight (x10³) [n] sperm_adj 110169	DO population	m	12-15wks	N=149	2019

Shorter8:27	Shorter8	histopathology	(none)	percentage of sperm with normal morphology [%] normal_sperm 110182	DO population	m	12-15wks	N=150	2019

Shorter8:28	Shorter8	histopathology	(none)	percentage of sperm with abnormal head shape [%] abnormal_head 110183	DO population	m	12-15wks	N=150	2019

Shorter8:29	Shorter8	histopathology	(none)	percentage of sperm with abnormal tail bending [%] abnormal_tail 110184	DO population	m	12-15wks	N=150	2019

Shorter8:30	Shorter8	histopathology	(none)	percentage of sperm with broken tails [%] broken_tail 110185	DO population	m	12-15wks	N=150	2019

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