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Examples
Phenotype measures in
Kumar1
associated with
ontology
term
MP:0001392 'abnormal locomotor behavior'
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MGI
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This MP term has been mapped to these MPD phenotype measurements to help users find relevant data. It should be noted that MPD measurements typically have a mixture of high-end, low-end and "normal" readings.
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Data set
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Kumar1
(17)
Procedure / Protocol
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circadian wheel r...
(6)
open field test
(11)
Treatment
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(none)
(13)
cocaine
(4)
Panel
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QTL population
(17)
Sex
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both
(17)
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Data set
Procedure / Protocol
Treatment
Phenotype Measure / Variable (click to view)
Panel
No. of Strains
Sex
Age
Sample Size (Avg)
Year
Kumar1:1
Kumar1
circadian wheel running
cocaine
cocaine response over 30 minutes; data are averaged in 5 minute bins and then summed over 30 minutes [cm x 100]
1sum_5min_avg
29001
QTL population
both
10-14wks
N=122
2014
Kumar1:2
Kumar1
circadian wheel running
cocaine
cocaine response over 60 minutes; data are averaged in 5 minute bins and then summed over 60 minutes [cm x 100]
1sum_60min
29002
QTL population
both
10-14wks
N=122
2014
Kumar1:3
Kumar1
circadian wheel running
(none)
average speed over 30 minutes of baseline [cm x 100 / min]
1baseline_avg
29003
QTL population
both
10-14wks
N=122
2014
Kumar1:4
Kumar1
circadian wheel running
cocaine
average speed over 30 minutes after cocaine response [cm x 100 / min]
130avg
29004
QTL population
both
10-14wks
N=122
2014
Kumar1:5
Kumar1
circadian wheel running
cocaine
net response–baselineavg subtracted from 30avg [cm x 100 / min]
1resp-baseline
29005
QTL population
both
10-14wks
N=122
2014
Kumar1:8
Kumar1
circadian wheel running
(none)
revolutions per minute on wheels [n/min]
Avg_Counts
29008
QTL population
both
10-14wks
N=122
2014
Kumar1:9
Kumar1
open field test
(none)
total distance traveled during test [cm x 100]
T1TotalDist
29009
QTL population
both
10-14wks
N=122
2014
Kumar1:10
Kumar1
open field test
(none)
distance traveled in corner [cm x 100]
T1CornerDist
29010
QTL population
both
10-14wks
N=122
2014
Kumar1:11
Kumar1
open field test
(none)
distance traveled in periphery [cm x 100]
T1PeripheralDist
29011
QTL population
both
10-14wks
N=122
2014
Kumar1:12
Kumar1
open field test
(none)
distance traveled in center [cm x 100]
T1CenterDist
29012
QTL population
both
10-14wks
N=122
2014
Kumar1:13
Kumar1
open field test
(none)
percentage of distance traveled in corner [%]
T1PercentCornerDist
29013
QTL population
both
10-14wks
N=122
2014
Kumar1:14
Kumar1
open field test
(none)
percentage of distance traveled in periphery [%]
T1PercentPeripheralDist
29014
QTL population
both
10-14wks
N=122
2014
Kumar1:15
Kumar1
open field test
(none)
percentage of distance traveled in center [%]
T1PercentCenterDist
29015
QTL population
both
10-14wks
N=122
2014
Kumar1:16
Kumar1
open field test
(none)
percentage of time in corner [%]
T1PercentTimeCorner
29016
QTL population
both
10-14wks
N=122
2014
Kumar1:17
Kumar1
open field test
(none)
percentage of time in periphery [%]
T1PercentTimePheripheral
29017
QTL population
both
10-14wks
N=122
2014
Kumar1:18
Kumar1
open field test
(none)
percentage of time in center [%]
T1PercentTimeCenter
29018
QTL population
both
10-14wks
N=122
2014
Kumar1:19
Kumar1
open field test
(none)
number of crossings between periphery and center [%]
T1TotalCrossing
29019
QTL population
both
10-14wks
N=122
2014
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