MPD: Phenotype measures mapped to MA:0000004, trunk

Phenotype measures in JaxKOMP-EAP associated with ontology term
MA:0000004 'trunk'

This list includes measures mapped MA:0000004 AND its ontology descendants. Alternatively, you can show measures mapped to MA:0000004 only.

MA:0000030 pelvis
MA:0000072 heart
MA:0000141 spleen
MA:0000309 vertebra
MA:0000310 caudal vertebra
MA:0000311 cervical vertebra
MA:0000312 lumbar vertebra
MA:0000314 thoracic vertebra
MA:0000315 rib
MA:0001329 clavicle
MA:0001330 scapula
MA:0001420 coccygeal vertebra

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
JaxKOMP-EAP:122	JaxKOMP-EAP	observation (SHIRPA)	(none)	body thickness body_thickness 100416 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:135	JaxKOMP-EAP	observation (SHIRPA)	(none)	trunk curl trunk_curl 100429 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:218	JaxKOMP-EAP	ECG	(none)	heart rate coefficient of variation (signal intensity) [%] HR_CV cv 100181 IMPC_ECG_003_001	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:219	JaxKOMP-EAP	ECG	(none)	heart rate, beats per min [n/min] HR hr 100182 IMPC_ECG_002_001	KOMP	1242	both	11wks	N=9	2019

JaxKOMP-EAP:220	JaxKOMP-EAP	ECG	(none)	heart rate variability, mean of differences between sequential beats; beats per min [n/min] HR_V hrv 100183 IMPC_ECG_010_001	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:221	JaxKOMP-EAP	ECG	(none)	mean R amplitude, mean amplitude of signal measured from isoelectric line to peak of QRS [mV] R_amplitude mean_r_amplitude 100184 IMPC_ECG_013_001	KOMP	1242	both	11wks	N=9	2019

JaxKOMP-EAP:222	JaxKOMP-EAP	ECG	(none)	mean SR amplitude, mean amplitude of signal measured from signal minimum line to peak of QRS [mV] SR_amplitude mean_sr_amplitude 100185 IMPC_ECG_012_001	KOMP	1242	both	11wks	N=9	2019

JaxKOMP-EAP:223	JaxKOMP-EAP	ECG	(none)	number of signals [n] signals n 100186 IMPC_ECG_001_001	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:224	JaxKOMP-EAP	ECG	(none)	duration of PQ interval [ms] PQ pq 100187 IMPC_ECG_005_001	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:225	JaxKOMP-EAP	ECG	(none)	duration of PR interval [ms] PR pr 100188 IMPC_ECG_006_001	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:226	JaxKOMP-EAP	ECG	(none)	duration of QRS interval [ms] QRS qrs 100189 IMPC_ECG_007_001	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:227	JaxKOMP-EAP	ECG	(none)	duration of QT interval [ms] QT qt 100190	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:228	JaxKOMP-EAP	ECG	(none)	duration of QTC interval, calculated by dividing QT interval by square root of preceding RR interval [ms] QTc qtc 100191 IMPC_ECG_009_001	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:229	JaxKOMP-EAP	ECG	(none)	QTc dispersion, calculated as rate-corrected QT dispersion [ms] QTc_dispersion qtc_dispersion 100192 IMPC_ECG_011_001	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:230	JaxKOMP-EAP	ECG	(none)	QT dispersion, measured as inter-lead variability of QT intervals [ms] QT_dispersion qt_dispersion 100193	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:231	JaxKOMP-EAP	ECG	(none)	root mean square of successive differences of neighboring RR intervals [ms] rMSSD rmssd 100194 IMPC_ECG_014_001	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:232	JaxKOMP-EAP	ECG	(none)	duration of RR interval [ms] RR rr 100195 IMPC_ECG_004_001	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:233	JaxKOMP-EAP	ECG	(none)	duration of ST interval [ms] ST st 100196 IMPC_ECG_008_001	KOMP	1243	both	11wks	N=9	2019

JaxKOMP-EAP:234	JaxKOMP-EAP	ECG	(none)	proportion of number pairs of successive beat-to-beat intervals that exceed 50 ms [%] pNN50 pnn50_6ms 100197 IMPC_ECG_015_001	KOMP	1231	both	11wks	N=9	2019

JaxKOMP-EAP:312	JaxKOMP-EAP	X-ray	(none)	cervical processes cervical_processes 100641 categorical	KOMP	18	both	14wks		2017

JaxKOMP-EAP:313	JaxKOMP-EAP	X-ray	(none)	clavicle clavicle 100642 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:317	JaxKOMP-EAP	X-ray	(none)	fusion of ribs fusion_of_ribs 100648 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:318	JaxKOMP-EAP	X-ray	(none)	fusion of vertebrae fusion_of_vertebrae 100649 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:325	JaxKOMP-EAP	X-ray	(none)	number of caudal vertebrae caudal_vertebrae number_of_caudal_vertebrae 100657	KOMP		both	14wks	N=4	2017

JaxKOMP-EAP:326	JaxKOMP-EAP	X-ray	(none)	number of cervical vertebrae cervical_vertebrae number_of_cervical_vertebrae 100658	KOMP	753	both	14wks	N=4	2017

JaxKOMP-EAP:328	JaxKOMP-EAP	X-ray	(none)	number of lumbar vertebrae lumbar_vertebrae number_of_lumbar_vertebrae 100660	KOMP	753	both	14wks	N=4	2017

JaxKOMP-EAP:329	JaxKOMP-EAP	X-ray	(none)	number of pelvic vertebrae pelvic_vertebrae number_of_pelvic_vertebrae 100661	KOMP	753	both	14wks	N=4	2017

JaxKOMP-EAP:330	JaxKOMP-EAP	X-ray	(none)	number of ribs left ribs_left number_of_ribs_left 100662	KOMP	753	both	14wks	N=4	2017

JaxKOMP-EAP:331	JaxKOMP-EAP	X-ray	(none)	number of ribs right ribs_right number_of_ribs_right 100663	KOMP	753	both	14wks	N=4	2017

JaxKOMP-EAP:332	JaxKOMP-EAP	X-ray	(none)	number of thoracic vertebrae thoracic_vertebrae number_of_thoracic_vertebrae 100664	KOMP	753	both	14wks	N=4	2017

JaxKOMP-EAP:333	JaxKOMP-EAP	X-ray	(none)	pelvis pelvis 100665 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:335	JaxKOMP-EAP	X-ray	(none)	processes on vertebrae vertebrae_processes processes_on_vertebrae 100667 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:337	JaxKOMP-EAP	X-ray	(none)	scapulae scapulae 100670 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:339	JaxKOMP-EAP	X-ray	(none)	shape of ribs shape_of_ribs 100673 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:341	JaxKOMP-EAP	X-ray	(none)	shape of vertebrae shape_of_vertebrae 100675 categorical	KOMP	76	both	14wks		2017

JaxKOMP-EAP:346	JaxKOMP-EAP	X-ray	(none)	transitional vertebrae transitional_vertebrae 100682 categorical	KOMP	30	both	14wks		2017

JaxKOMP-EAP:421	JaxKOMP-EAP	organ weights	(none)	heart weight [mg] heart_wt heart_weight 100583 weight normalized to body weight	KOMP	1854	both	18wks	N=8	2021

JaxKOMP-EAP:446	JaxKOMP-EAP	organ weights	(none)	spleen weight [g] spleen_weight 100707	KOMP	132	both	18wks	N=2	2016

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