Project measure / variable:   Schwartz2   pctEOS_ctrl72

ID, description, units MPD:9804   pctEOS_ctrl72   alveolar eosinophils (percentage of total lavage cells), 72h post-challenge   [%]  control  
ovalbumin study
Data set, strains Schwartz2   inbred   8 strains     sex: m     age: 6-8wks
Procedure bronchoalveolar lavage assessment
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  STRAIN COMPARISON PLOT
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Schwartz2 - alveolar eosinophils (percentage of total lavage cells), 72h post-challenge control



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means3.95   %
Median of the strain means1.61   %
SD of the strain means± 7.75
Coefficient of variation (CV)1.96
Min–max range of strain means0   –   23.0   %
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 1713.6708 244.8101 7.776 < 0.0001
Residuals 28 881.5167 31.4827


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 1.83 0.764   3 0.441 0.417 1.0, 2.5 -0.27
A/J m 1.4 1.67   5 0.748 1.2 -0.33
BALB/cJ m 2.2 2.95   5 1.32 1.34 -0.23
BTBR T+ Itpr3tf/J m 0.75 0.957   4 0.479 1.28 -0.41
C3H/HeJ m 0.2 0.447   5 0.2 2.24 -0.48
C57BL/6J m 23.0 15.6   4 7.82 0.68 3.0, 40.0 2.46
DBA/2J m 0.0 0.0   5 0.0 0.0 -0.51
FVB/NJ m 2.2 4.92   5 2.2 2.24 -0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 1.8333 3.2395 8.4691 -4.8024
A/J m 1.4 2.5093 6.5401 -3.7401
BALB/cJ m 2.2 2.5093 7.3401 -2.9401
BTBR T+ Itpr3tf/J m 0.75 2.8055 6.4968 -4.9968
C3H/HeJ m 0.2 2.5093 5.3401 -4.9401
C57BL/6J m 23.0 2.8055 28.7468 17.2532
DBA/2J m 0.0 2.5093 5.1401 -5.1401
FVB/NJ m 2.2 2.5093 7.3401 -2.9401




  GWAS USING LINEAR MIXED MODELS