Project measure / variable:   Schwartz2   pctEOS_ctrl48

ID, description, units MPD:9803   pctEOS_ctrl48   alveolar eosinophils (percentage of total lavage cells), 48h post-challenge   [%]  control  
ovalbumin study
Data set, strains Schwartz2   inbred   8 strains     sex: m     age: 6-8wks
Procedure bronchoalveolar lavage assessment
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  STRAIN COMPARISON PLOT
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Schwartz2 - alveolar eosinophils (percentage of total lavage cells), 48h post-challenge control



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means3.93   %
Median of the strain means0.500   %
SD of the strain means± 7.68
Coefficient of variation (CV)1.95
Min–max range of strain means0   –   21.8   %
Mean sample size per strain4.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 2053.0244 293.2892 5.5238 0.0003
Residuals 31 1645.95 53.0952


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 7.8 5.36   5 2.4 0.687 2.0, 16.5 0.5
A/J m 0.25 0.5   4 0.25 2.0 -0.48
BALB/cJ m 0.4 0.894   5 0.4 2.24 -0.46
BTBR T+ Itpr3tf/J m 0.6 0.548   5 0.245 0.913 -0.43
C3H/HeJ m 0.6 1.34   5 0.6 2.24 -0.43
C57BL/6J m 21.8 19.5   5 8.71 0.894 2.33
DBA/2J m 0.0 0.0   5 0.0 0.0 -0.51
FVB/NJ m 0.0 0.0   5 0.0 0.0 -0.51


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 7.8 3.2587 14.4461 1.1539
A/J m 0.25 3.6433 7.6806 -7.1806
BALB/cJ m 0.4 3.2587 7.0461 -6.2461
BTBR T+ Itpr3tf/J m 0.6 3.2587 7.2461 -6.0461
C3H/HeJ m 0.6 3.2587 7.2461 -6.0461
C57BL/6J m 21.8 3.2587 28.4461 15.1539
DBA/2J m 0.0 3.2587 6.6461 -6.6461
FVB/NJ m 0.0 3.2587 6.6461 -6.6461




  GWAS USING LINEAR MIXED MODELS