Project measure / variable:   CSNA03   dist_l60_cocaine_do_d11

ID, description, units MPD:90423   dist_l60_cocaine_do_d11   distance traveled, last 60 min (post-injection), on successive days, cocaine sensitization, DO   [cm]  day 11  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means24860.0   cm 22810.0   cm
Median of the strain means19380.0   cm 24804.0   cm
SD of the strain means± 16375.0 ± 14470.0
Coefficient of variation (CV)0.6587 0.6344
Min–max range of strain means3299.0   –   54401.0   cm 1934.0   –   39690.0   cm
Mean sample size per strain22.4   mice 22.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 804825847.9535 804825847.9535 4.0693 0.0444
strain 8 26527891400.2664 3315986425.0333 16.7662 < 0.0001
sex:strain 8 3965951244.0693 495743905.5087 2.5066 0.0115
Residuals 390 77133547615.0302 197778327.218


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 15173.0 36807.0   6 15026.0 2.4258 -0.59
129S1/SvImJ m 1934.0 2005.0   6 818.6 1.037 94.13, 5711.0 -1.44
A/J f 3299.0 3013.0   11 908.5 0.9133 407.8, 10159.0 -1.32
A/J m 4524.0 4351.0   12 1256.0 0.9618 578.1, 15445.0 -1.26
C57BL/6J f 13779.0 7358.0   6 3004.0 0.534 -0.68
C57BL/6J m 24804.0 8716.0   7 3295.0 0.3514 14927.0, 38759.0 0.14
CAST/EiJ f 42466.0 16723.0   6 6827.0 0.3938 20951.0, 61007.0 1.08
CAST/EiJ m 39097.0 20761.0   5 9284.0 0.531 19564.0, 73504.0 1.13
J:DO f 19380.0 14177.0   146 1173.0 0.7316 1021.0, 79714.0 -0.33
J:DO m 24656.0 14773.0   147 1218.0 0.5992 678.7, 62492.0 0.13
NOD/ShiLtJ f 27495.0 8521.0   6 3479.0 0.3099 16653.0, 39012.0 0.16
NOD/ShiLtJ m 30338.0 9752.0   6 3981.0 0.3215 16308.0, 44848.0 0.52
NZO/HlLtJ f 12876.0 4382.0   5 1960.0 0.3403 9199.0, 18905.0 -0.73
NZO/HlLtJ m 8374.0 3274.0   7 1238.0 0.391 2814.0, 13694.0 -1.0
PWK/PhJ f 34873.0 6543.0   9 2181.0 0.1876 23227.0, 42120.0 0.61
PWK/PhJ m 39690.0 14997.0   9 4999.0 0.3778 21548.0, 62088.0 1.17
WSB/EiJ f 54401.0 15466.0   7 5845.0 0.2843 36639.0, 82782.0 1.8
WSB/EiJ m 31873.0 10232.0   7 3867.0 0.321 21168.0, 47249.0 0.63


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 15172.916666667 5741.3460561386 26460.7781026435 3885.0552306905
129S1/SvImJ m 1933.5216666668 5741.3460561385 13221.3831026431 -9354.3397693094
A/J f 3299.2545454544 4240.2650776705 11635.8927101892 -5037.3836192804
A/J m 4524.1083333331 4059.7447294342 12505.831699806 -3457.6150331397
C57BL/6J f 13779.3333333334 5741.3460561385 25067.1947693097 2491.4718973572
C57BL/6J m 24804.0000000002 5315.453578523 35254.5290008747 14353.4709991258
CAST/EiJ f 42466.1666666663 5741.3460561386 53754.0281026426 31178.3052306899
CAST/EiJ m 39096.9999999997 6289.3294907808 51462.2326689535 26731.7673310459
J:DO f 19379.5136986302 1163.8926397378 21667.8026669752 17091.2247302851
J:DO m 24656.2020408164 1159.9270655526 26936.6944312372 22375.7096503955
NOD/ShiLtJ f 27494.6666666666 5741.3460561385 38782.5281026429 16206.8052306903
NOD/ShiLtJ m 30337.6666666667 5741.3460561385 41625.528102643 19049.8052306904
NZO/HlLtJ f 12875.7999999994 6289.3294907808 25241.0326689532 510.5673310457
NZO/HlLtJ m 8374.2857142859 5315.4535785229 18824.8147151602 -2076.2432865884
PWK/PhJ f 34873.1111111111 4687.78942476 44089.6113795717 25656.6108426505
PWK/PhJ m 39690.3333333334 4687.78942476 48906.833601794 30473.8330648728
WSB/EiJ f 54401.0 5315.4535785229 64851.5290008743 43950.4709991257
WSB/EiJ m 31872.7142857143 5315.4535785229 42323.2432865887 21422.18528484


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 8553.2191666669 4059.7447294342 16534.9425331399 571.4958001939
A/J both 3911.6814393938 2935.1905899396 9682.4578990353 -1859.0950202478
C57BL/6J both 19291.6666666668 3912.0679084651 26983.0477551957 11600.285578138
CAST/EiJ both 40781.583333333 4257.8961935427 49152.8854237362 32410.2812429297
J:DO both 22017.8578697233 821.5955322172 23633.1683619675 20402.547377479
NOD/ShiLtJ both 28916.1666666667 4059.7447294342 36897.8900331396 20934.4433001937
NZO/HlLtJ both 10625.0428571427 4117.3326374316 18719.9878130315 2530.0979012539
PWK/PhJ both 37281.7222222223 3314.7676910224 43798.7720608584 30764.6723835861
WSB/EiJ both 43136.8571428572 3758.5932704559 50526.4970663621 35747.2172193522




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA