Project measure / variable:   CSNA03   dist_l60_cont_in_d9

ID, description, units MPD:90412   dist_l60_cont_in_d9   distance traveled, last 60 min (post-injection), on successive days, saline control, founders   [cm]  day 9  
Data set, strains CSNA03   inbred w/CC8   9 strains     sex: both     age: 8-14wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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CSNA03 - distance traveled, last 60 min (post-injection), on successive days, saline control, founders day 9



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means10571.0   cm 6645.0   cm
Median of the strain means8072.0   cm 7176.0   cm
SD of the strain means± 8631.0 ± 5205.0
Coefficient of variation (CV)0.8165 0.7832
Min–max range of strain means759.0   –   20489.0   cm 371.9   –   13593.0   cm
Mean sample size per strain6.9   mice 6.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 423941068.7003 423941068.7003 11.8171 0.0008
strain 8 5464485613.7461 683060701.7183 19.04 < 0.0001
sex:strain 8 525263518.2768 65657939.7846 1.8302 0.0795
Residuals 104 3731013219.8223 35875127.1137


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 759.0 1245.0   8 440.1 1.64 -1.14
129S1/SvImJ m 371.9 534.5   8 189.0 1.4372 -1.21
A/J f 1543.0 1178.0   7 445.4 0.7638 428.1, 3211.0 -1.05
A/J m 1291.0 1122.0   8 396.6 0.8689 168.0, 2994.0 -1.03
C57BL/6J f 8072.0 1687.0   7 637.8 0.209 6554.0, 11168.0 -0.29
C57BL/6J m 5122.0 1845.0   6 753.3 0.3603 2977.0, 7626.0 -0.29
CAST/EiJ f 18302.0 5572.0   7 2106.0 0.3044 11618.0, 29530.0 0.9
CAST/EiJ m 13322.0 4466.0   7 1688.0 0.3352 8065.0, 21130.0 1.28
DBA/2J f 6414.0 1409.0   3 813.6 0.2197 4864.0, 7618.0 -0.48
DBA/2J m 7517.0 9595.0   2   6785.0 1.2765 732.0, 14302.0 0.17
NOD/ShiLtJ f 20412.0 24364.0   5 10896.0 1.1936 6941.0, 63277.0 1.14
NOD/ShiLtJ m 7176.0 3823.0   5 1710.0 0.5327 3826.0, 12811.0 0.1
NZO/HlLtJ f 1278.0 648.9   10 205.2 0.5076 324.8, 2400.0 -1.08
NZO/HlLtJ m 670.8 375.4   9 125.1 0.5596 71.37, 1176.0 -1.15
PWK/PhJ f 17868.0 4462.0   8 1577.0 0.2497 12825.0, 24780.0 0.85
PWK/PhJ m 13593.0 8061.0   8 2850.0 0.593 5343.0, 31404.0 1.34
WSB/EiJ f 20489.0 5594.0   7 2114.0 0.273 15387.0, 30304.0 1.15
WSB/EiJ m 10740.0 2742.0   7 1037.0 0.2553 7032.0, 13901.0 0.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 759.0455 2117.6380449004 4958.4012105471 -3440.3102105471
129S1/SvImJ m 371.8625 2117.6380449004 4571.2182105471 -3827.4932105471
A/J f 1542.8571428571 2263.8502952043 6032.1572325885 -2946.4429468742
A/J m 1291.025 2117.6380449004 5490.3807105471 -2908.3307105471
C57BL/6J f 8072.4285714286 2263.8502952043 12561.7286611599 3583.1284816972
C57BL/6J m 5121.6666666666 2445.2377905389 9970.6649664813 272.6683668519
CAST/EiJ f 18301.8571428571 2263.8502952043 22791.1572325885 13812.5570531258
CAST/EiJ m 13321.5714285714 2263.8502952043 17810.8715183028 8832.27133884
DBA/2J f 6414.0 3458.0884466073 13271.519159522 -443.519159522
DBA/2J m 7517.0 4235.2760898008 15915.7114210942 -881.7114210942
NOD/ShiLtJ f 20411.8 2678.6237926844 25723.6115002255 15099.9884997746
NOD/ShiLtJ m 7176.4000000001 2678.6237926844 12488.2115002255 1864.5884997747
NZO/HlLtJ f 1278.44 1894.0730480548 5034.4579321941 -2477.5779321941
NZO/HlLtJ m 670.7633333333 1996.5282955302 4629.9538660564 -3288.4271993897
PWK/PhJ f 17868.125 2117.6380449004 22067.4807105471 13668.7692894529
PWK/PhJ m 13593.0 2117.6380449004 17792.3557105471 9393.6442894529
WSB/EiJ f 20489.4285714286 2263.8502952043 24978.7286611599 16000.1284816972
WSB/EiJ m 10740.1428571428 2263.8502952043 15229.4429468742 6250.8427674115


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 565.454 1497.3962216477 3534.8468995423 -2403.9388995423
A/J both 1416.9410714286 1549.9523418727 4490.5547296234 -1656.6725867662
C57BL/6J both 6597.0476190476 1666.1487037008 9901.0830231886 3293.0122149066
CAST/EiJ both 15811.7142857143 1600.7838953301 18986.1288219447 12637.2997494838
DBA/2J both 6965.5 2733.8589603981 12386.8449105833 1544.1550894167
NOD/ShiLtJ both 13794.1000000001 1894.0730480548 17550.1179321941 10038.082067806
NZO/HlLtJ both 974.6016666667 1376.0121680258 3703.2854327601 -1754.0820994268
PWK/PhJ both 15730.5625 1497.3962216477 18699.9553995423 12761.1696004577
WSB/EiJ both 15614.7857142857 1600.7838953301 18789.2002505161 12440.3711780553




  GWAS USING LINEAR MIXED MODELS