Project measure / variable:   CSNA03   dist_l60_cocaine_do_d3

ID, description, units MPD:90399   dist_l60_cocaine_do_d3   distance traveled, last 60 min (post-injection), on successive days, cocaine sensitization, DO   [cm]  day 3  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means18530.0   cm 17908.0   cm
Median of the strain means13301.0   cm 16088.0   cm
SD of the strain means± 14475.0 ± 13206.0
Coefficient of variation (CV)0.7812 0.7375
Min–max range of strain means2955.0   –   41378.0   cm 2120.0   –   37498.0   cm
Mean sample size per strain27.1   mice 28.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 428460827.5855 428460827.5855 3.4049 0.0656
strain 8 23663999329.7725 2957999916.2216 23.5064 < 0.0001
sex:strain 8 1274868161.6744 159358520.2093 1.2664 0.2589
Residuals 478 60150479534.9958 125837823.295


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 3334.0 7786.0   6 3179.0 2.3351 -1.05
129S1/SvImJ m 2199.0 1809.0   6 738.7 0.8229 760.4, 5750.0 -1.19
A/J f 2955.0 2499.0   12 721.4 0.8456 143.4, 9456.0 -1.08
A/J m 2120.0 1273.0   12 367.5 0.6004 166.8, 4788.0 -1.2
C57BL/6J f 12490.0 912.7   5 408.2 0.0731 11628.0, 13895.0 -0.42
C57BL/6J m 14106.0 4868.0   7 1840.0 0.3451 5400.0, 20553.0 -0.29
CAST/EiJ f 35390.0 17575.0   6 7175.0 0.4966 18616.0, 68608.0 1.16
CAST/EiJ m 22258.0 10160.0   5 4544.0 0.4565 10106.0, 34998.0 0.33
J:DO f 13301.0 11866.0   187 867.7 0.8921 198.4, 74093.0 -0.36
J:DO m 16088.0 11716.0   193 843.4 0.7283 500.3, 52590.0 -0.14
NOD/ShiLtJ f 21848.0 4965.0   6 2027.0 0.2273 14464.0, 28392.0 0.23
NOD/ShiLtJ m 27766.0 12916.0   6 5273.0 0.4652 12838.0, 51242.0 0.75
NZO/HlLtJ f 5366.0 2697.0   6 1101.0 0.5026 2505.0, 8645.0 -0.91
NZO/HlLtJ m 5856.0 5500.0   7 2079.0 0.9391 1654.0, 14331.0 -0.91
PWK/PhJ f 30709.0 7986.0   9 2662.0 0.2601 18553.0, 39809.0 0.84
PWK/PhJ m 37498.0 16757.0   9 5586.0 0.4469 15106.0, 62228.0 1.48
WSB/EiJ f 41378.0 9998.0   7 3779.0 0.2416 20152.0, 48795.0 1.58
WSB/EiJ m 33281.0 9704.0   7 3668.0 0.2916 20936.0, 48277.0 1.16


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 3334.311666667 4579.6255904999 12332.9978389055 -5664.3745055715
129S1/SvImJ m 2198.7333333334 4579.6255904999 11197.419505572 -6799.9528389052
A/J f 2955.3333333334 3238.284310338 9318.3653474929 -3407.6986808262
A/J m 2120.25 3238.2843103379 8483.2820141595 -4242.7820141595
C57BL/6J f 12490.0000000002 5016.7284816895 22347.56680889 2632.4331911103
C57BL/6J m 14105.7142857144 4239.9094211175 22436.8788155182 5774.5497559107
CAST/EiJ f 35390.0000000001 4579.6255904999 44388.6861722387 26391.3138277615
CAST/EiJ m 22258.2000000003 5016.7284816894 32115.7668088901 12400.6331911105
J:DO f 13301.4069518717 820.3228244641 14913.2914850942 11689.5224186492
J:DO m 16088.1186528498 807.4710193711 17674.7501695334 14501.4871361661
NOD/ShiLtJ f 21847.8333333334 4579.6255904999 30846.519505572 12849.1471610948
NOD/ShiLtJ m 27766.0000000001 4579.6255904999 36764.6861722387 18767.3138277615
NZO/HlLtJ f 5365.6666666671 4579.6255904999 14364.3528389057 -3633.0195055714
NZO/HlLtJ m 5856.2857142857 4239.9094211176 14187.4502440895 -2474.8788155182
PWK/PhJ f 30708.8888888889 3739.2486365723 38056.2853813633 23361.4923964145
PWK/PhJ m 37498.3333333334 3739.2486365723 44845.7298258078 30150.9368408589
WSB/EiJ f 41378.0 4239.9094211176 49709.1645298039 33046.8354701962
WSB/EiJ m 33280.8571428572 4239.9094211176 41612.021672661 24949.6926130533


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2766.5225000002 3238.2843103379 9129.5545141597 -3596.5095141593
A/J both 2537.7916666667 2289.81279525 7037.134752786 -1961.5514194526
C57BL/6J both 13297.8571428573 3284.2197154833 19751.1494385462 6844.5648471684
CAST/EiJ both 28824.1000000002 3396.341237573 35497.7042776407 22150.4957223597
J:DO both 14694.7628023607 575.529969563 15825.6442415682 13563.8813631533
NOD/ShiLtJ both 24806.9166666667 3238.2843103379 31169.9486808263 18443.8846525072
NZO/HlLtJ both 5610.9761904764 3120.4888418501 11742.5472625814 -520.5948816286
PWK/PhJ both 34103.6111111111 2644.0480674628 39299.0049950061 28908.2172272162
WSB/EiJ both 37329.4285714286 2998.068703289 43220.4515056337 31438.4056372235




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA