Project measure / variable:   CSNA03   dist_l60_cocaine_do_d2

ID, description, units MPD:90393   dist_l60_cocaine_do_d2   distance traveled, last 60 min (post-injection), on successive days, cocaine sensitization, DO   [cm]  day 2 (saline)  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means10801.0   cm 9029.0   cm
Median of the strain means9395.0   cm 10025.0   cm
SD of the strain means± 8964.0 ± 6115.0
Coefficient of variation (CV)0.8299 0.6772
Min–max range of strain means309.7   –   22350.0   cm 437.0   –   17760.0   cm
Mean sample size per strain27.1   mice 27.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 48134247.5796 48134247.5796 1.9285 0.1656
strain 8 7457405769.267 932175721.1584 37.3483 < 0.0001
sex:strain 8 457063445.6871 57132930.7109 2.2891 0.0206
Residuals 476 11880467660.0903 24958965.6725


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 309.7 541.8   6 221.2 1.7492 -1.17
129S1/SvImJ m 437.0 502.0   6 205.0 1.1487 6.35, 1269.0 -1.41
A/J f 1660.0 986.0   12 284.6 0.5938 225.5, 3674.0 -1.02
A/J m 5291.0 11350.0   12 3276.0 2.145 308.9, 41260.0 -0.61
C57BL/6J f 9395.0 583.0   6 238.0 0.0621 8506.0, 9956.0 -0.16
C57BL/6J m 10025.0 1778.0   6 725.7 0.1773 8211.0, 12372.0 0.16
CAST/EiJ f 20073.0 5714.0   6 2333.0 0.2847 12656.0, 27257.0 1.03
CAST/EiJ m 11841.0 3517.0   5 1573.0 0.297 8747.0, 17518.0 0.46
J:DO f 6985.0 4993.0   186 366.1 0.7148 228.0, 28005.0 -0.43
J:DO m 6739.0 4679.0   192 337.7 0.6943 136.5, 31774.0 -0.37
NOD/ShiLtJ f 15422.0 4868.0   6 1987.0 0.3156 7679.0, 20030.0 0.52
NOD/ShiLtJ m 13960.0 3865.0   6 1578.0 0.2769 7788.0, 19427.0 0.81
NZO/HlLtJ f 713.1 293.1   6 119.7 0.411 401.1, 1184.0 -1.13
NZO/HlLtJ m 801.5 328.1   7 124.0 0.4093 198.2, 1154.0 -1.35
PWK/PhJ f 22350.0 5984.0   9 1995.0 0.2677 11665.0, 34046.0 1.29
PWK/PhJ m 17760.0 9764.0   9 3255.0 0.5498 4623.0, 35054.0 1.43
WSB/EiJ f 20297.0 4310.0   7 1629.0 0.2123 13041.0, 25894.0 1.06
WSB/EiJ m 14410.0 3468.0   7 1311.0 0.2407 9390.0, 21087.0 0.88


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 309.7166666665 2039.5655449327 4317.3818459612 -3697.9485126281
129S1/SvImJ m 437.0416666665 2039.5655449327 4444.7068459611 -3570.6235126281
A/J f 1660.3499999999 1442.1906274963 4494.1972250043 -1173.4972250046
A/J m 5291.2416666666 1442.1906274963 8125.088891671 2457.3944416621
C57BL/6J f 9394.9999999998 2039.5655449326 13402.6651792943 5387.3348207052
C57BL/6J m 10024.8333333331 2039.5655449327 14032.4985126278 6017.1681540384
CAST/EiJ f 20072.8333333333 2039.5655449327 24080.498512628 16065.1681540387
CAST/EiJ m 11840.5999999998 2234.2321129399 16230.7772432551 7450.4227567445
J:DO f 6984.9215053763 366.316785701 7704.7194203257 6265.1235904269
J:DO m 6738.7666666667 360.5476568741 7447.2284729178 6030.3048604155
NOD/ShiLtJ f 15422.3333333333 2039.5655449327 19429.9985126279 11414.6681540387
NOD/ShiLtJ m 13959.8333333333 2039.5655449327 17967.4985126279 9952.1681540387
NZO/HlLtJ f 713.05 2039.5655449327 4720.7151792946 -3294.6151792947
NZO/HlLtJ m 801.5285714285 1888.2707763022 4511.905547578 -2908.848404721
PWK/PhJ f 22349.9999999999 1665.2982940155 25622.2449163971 19077.7550836028
PWK/PhJ m 17760.1111111111 1665.2982940155 21032.3560275082 14487.8661947139
WSB/EiJ f 20297.0 1888.2707763022 24007.3769761495 16586.6230238504
WSB/EiJ m 14409.7142857143 1888.2707763022 18120.0912618638 10699.3373095647


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 373.3791666665 1442.1906274963 3207.2263916709 -2460.4680583379
A/J both 3475.7958333332 1019.7827724663 5479.6284229805 1471.9632436859
C57BL/6J both 9709.9166666664 1442.1906274963 12543.7638916708 6876.069441662
CAST/EiJ both 15956.7166666666 1512.5822908662 18928.8807106136 12984.5526227195
J:DO both 6861.8440860215 256.9934825845 7366.8260582943 6356.8621137487
NOD/ShiLtJ both 14691.0833333333 1442.1906274963 17524.9305583377 11857.2361083289
NZO/HlLtJ both 757.2892857143 1389.7296622647 3488.0528004877 -1973.4742290592
PWK/PhJ both 20055.0555555555 1177.5437163968 22368.8821256431 17741.2289854679
WSB/EiJ both 17353.3571428571 1335.2090706397 19976.9898634509 14729.7244222634




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA