Phenotype measure:   JaxCC1   duration_rota

ID, description, units MPD:89141   duration_rota   mean duration on accelerating rotarod (4-40 rpm/5 min) over 5 trials   [s]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 10-12wks
Procedure rotarod
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - mean duration on accelerating rotarod (4-40 rpm/5 min) over 5 trials



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means66.22   s 57.37   s
Median of the strain means62.75   s 49.025   s
SD of the strain means± 32.729 ± 32.815
Coefficient of variation (CV)0.4943 0.572
Min–max range of strain means19.6   –   128.0   s 17.25   –   125.8   s
Mean sample size per strain6.9   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7925.1574 7925.1574 10.7441 0.0012
strain 16 248713.57 15544.5981 21.0736 < 0.0001
sex:strain 16 13833.2859 864.5804 1.1721 0.2924
Residuals 212 156378.027 737.6322


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 84.12 37.523   8 13.266 0.446 42.0, 155.0 0.55
CC002/UncJ m 73.0 42.665   7 16.126 0.5845 22.4, 139.0 0.48
CC003/UncJ f 88.88 11.218   5 5.017 0.1262 75.2, 104.8 0.69
CC003/UncJ m 91.45 47.604   4 23.802 0.5206 25.6, 139.4 1.04
CC004/TauUncJ f 59.95 34.849   8 12.321 0.5813 9.0, 109.2 -0.19
CC004/TauUncJ m 49.5 23.625   8 8.3528 0.4773 8.0, 80.8 -0.24
CC006/TauUncJ f 24.25 6.8826   4 3.4413 0.2838 19.0, 34.2 -1.28
CC006/TauUncJ m 20.525 8.5175   8 3.0114 0.415 10.2, 32.6 -1.12
CC009/UncJ f 32.075 21.872   8 7.733 0.6819 9.4, 71.2 -1.04
CC009/UncJ m 31.75 19.432   8 6.8703 0.612 7.2, 64.0 -0.78
CC010/GeniUncJ f 44.2 5.424   5 2.4257 0.1227 38.2, 50.0 -0.67
CC013/GeniUncJ f 65.55 31.294   8 11.064 0.4774 9.4, 96.8 -0.02
CC013/GeniUncJ m 44.45 18.332   4 9.166 0.4124 30.4, 71.2 -0.39
CC017/UncJ f 123.9 33.336   6 13.609 0.269 70.4, 157.0 1.76
CC017/UncJ m 96.36 16.058   5 7.1815 0.1666 77.8, 114.0 1.19
CC018/UncJ f 19.6 12.725   8 4.4989 0.6492 7.2, 38.0 -1.42
CC018/UncJ m 17.25 7.9209   8 2.8004 0.4592 8.0, 29.0 -1.22
CC019/TauUncJ f 58.26 10.408   7 3.9337 0.1786 48.4, 76.4 -0.24
CC019/TauUncJ m 37.775 24.041   8 8.5 0.6364 5.6, 84.4 -0.6
CC024/GeniUncJ f 75.97 40.735   7 15.396 0.5362 28.6, 119.4 0.3
CC024/GeniUncJ m 49.025 42.274   8 14.946 0.8623 6.0, 112.6 -0.25
CC025/GeniUncJ f 58.68 18.63   5 8.3318 0.3175 27.0, 73.4 -0.23
CC025/GeniUncJ m 27.52 16.417   10 5.1915 0.5965 5.6, 56.2 -0.91
CC026/GeniUncJ f 103.1 41.791   8 14.775 0.4055 24.2, 151.8 1.13
CC026/GeniUncJ m 125.8 51.2   8 18.101 0.407 59.6, 214.8 2.09
CC032/GeniUncJ f 30.075 15.515   8 5.4854 0.5159 9.4, 56.2 -1.1
CC032/GeniUncJ m 40.625 16.579   8 5.8615 0.4081 18.4, 65.2 -0.51
CC040/TauUncJ f 87.7 18.264   8 6.4574 0.2083 50.4, 106.6 0.66
CC040/TauUncJ m 57.83 33.885   7 12.807 0.586 15.4, 106.8 0.01
CC041/TauUncJ f 31.95 12.044   8 4.2581 0.377 16.6, 49.6 -1.05
CC041/TauUncJ m 37.225 9.2467   8 3.2692 0.2484 24.2, 49.4 -0.61
CC051/TauUncJ f 128.0 27.293   8 9.6496 0.2132 104.8, 182.6 1.89
CC051/TauUncJ m 118.5 29.964   10 9.4755 0.2529 63.8, 160.4 1.86
CC068/TauUncJ f 75.68 23.923   5 10.699 0.3161 43.6, 104.8 0.29
CC068/TauUncJ m 56.73 15.327   8 5.4187 0.2702 36.8, 82.8 -0.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 84.125 9.6023 103.0532 65.1968
CC002/UncJ m 73.0 10.2653 93.2351 52.7649
CC003/UncJ f 88.88 12.146 112.8225 64.9375
CC003/UncJ m 91.45 13.5797 118.2185 64.6815
CC004/TauUncJ f 59.95 9.6023 78.8782 41.0218
CC004/TauUncJ m 49.5 9.6023 68.4282 30.5718
CC006/TauUncJ f 24.25 13.5797 51.0185 -2.5185
CC006/TauUncJ m 20.525 9.6023 39.4532 1.5968
CC009/UncJ f 32.075 9.6023 51.0032 13.1468
CC009/UncJ m 31.75 9.6023 50.6782 12.8218
CC013/GeniUncJ f 65.55 9.6023 84.4782 46.6218
CC013/GeniUncJ m 44.45 13.5797 71.2185 17.6815
CC017/UncJ f 123.9333 11.0878 145.7897 102.0769
CC017/UncJ m 96.36 12.146 120.3025 72.4175
CC018/UncJ f 19.6 9.6023 38.5282 0.6718
CC018/UncJ m 17.25 9.6023 36.1782 -1.6782
CC019/TauUncJ f 58.2571 10.2653 78.4922 38.022
CC019/TauUncJ m 37.775 9.6023 56.7032 18.8468
CC024/GeniUncJ f 75.9714 10.2653 96.2065 55.7363
CC024/GeniUncJ m 49.025 9.6023 67.9532 30.0968
CC025/GeniUncJ f 58.68 12.146 82.6225 34.7375
CC025/GeniUncJ m 27.52 8.5886 44.4499 10.5901
CC026/GeniUncJ f 103.05 9.6023 121.9782 84.1218
CC026/GeniUncJ m 125.8 9.6023 144.7282 106.8718
CC032/GeniUncJ f 30.075 9.6023 49.0032 11.1468
CC032/GeniUncJ m 40.625 9.6023 59.5532 21.6968
CC040/TauUncJ f 87.7 9.6023 106.6282 68.7718
CC040/TauUncJ m 57.8286 10.2653 78.0637 37.5935
CC041/TauUncJ f 31.95 9.6023 50.8782 13.0218
CC041/TauUncJ m 37.225 9.6023 56.1532 18.2968
CC051/TauUncJ f 128.025 9.6023 146.9532 109.0968
CC051/TauUncJ m 118.48 8.5886 135.4099 101.5501
CC068/TauUncJ f 75.68 12.146 99.6225 51.7375
CC068/TauUncJ m 56.725 9.6023 75.6532 37.7968


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 78.5625 7.0282 92.4165 64.7085
CC003/UncJ both 90.165 9.1095 108.1219 72.2081
CC004/TauUncJ both 54.725 6.7898 68.1093 41.3407
CC006/TauUncJ both 22.3875 8.3158 38.7798 5.9952
CC009/UncJ both 31.9125 6.7898 45.2968 18.5282
CC013/GeniUncJ both 55.0 8.3158 71.3923 38.6077
CC017/UncJ both 110.1467 8.2229 126.3558 93.9375
CC018/UncJ both 18.425 6.7898 31.8093 5.0407
CC019/TauUncJ both 48.0161 7.0282 61.8701 34.162
CC024/GeniUncJ both 62.4982 7.0282 76.3522 48.6442
CC025/GeniUncJ both 43.1 7.4379 57.7617 28.4383
CC026/GeniUncJ both 114.425 6.7898 127.8093 101.0407
CC032/GeniUncJ both 35.35 6.7898 48.7343 21.9657
CC040/TauUncJ both 72.7643 7.0282 86.6183 58.9103
CC041/TauUncJ both 34.5875 6.7898 47.9718 21.2032
CC051/TauUncJ both 123.2525 6.4414 135.9499 110.5551
CC068/TauUncJ both 66.2025 7.7416 81.4629 50.9421




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA