MPD: Project measure / variable: JaxCC1 duration

Project measure / variable: JaxCC1 duration

ID, description, units	MPD:89139 duration duration [s]
Data set, strains	JaxCC1 CC 18 strains sex: both age: 10-12wks
Procedure	rotarod
Ontology mappings

STRAIN COMPARISON PLOT

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Visualization Options Least squares means Alphabetical order Strains on X-axis Individual points

JaxCC1 - duration

MEASURE SUMMARY

Measure Summary	Female	Male
Number of strains tested	18 strains	17 strains
Mean of the strain means	91.86 s	74.33 s
Median of the strain means	98.55 s	57.75 s
SD of the strain means	± 49.034	± 45.736
Coefficient of variation (CV)	0.5338	0.6153
Min–max range of strain means	20.375 – 190.7 s	26.75 – 183.9 s
Mean sample size per strain	6.9 mice	7.4 mice

ANOVA, Q-Q NORMALITY ASSESSMENT

ANOVA summary

Factor	DF	Sum of squares	Mean sum of squares	F value	p value (Pr>F)
sex	1	25985.9016	25985.9016	11.4207	0.0009
strain	16	462697.2325	28918.577	12.7096	< 0.0001
sex:strain	16	64516.5836	4032.2865	1.7722	0.0365
Residuals	211	480095.2782	2275.3331

Q-Q normality assessment based on residuals

STRAIN MEANS (UNADJUSTED)

Strain	Sex	Mean	SD	N mice	SEM	CV	Min, Max	Z score
CC002/UncJ	f	95.5	66.7	8	23.58	0.6984	4.0, 195.0	0.07
CC002/UncJ	m	43.857	68.95	7	26.061	1.5722	2.0, 195.0	-0.67
CC003/UncJ	f	132.8	36.609	5	16.372	0.2757	79.0, 167.0	0.83
CC003/UncJ	m	140.8	44.245	4	22.122	0.3143	93.0, 196.0	1.45
CC004/TauUncJ	f	80.62	84.29	8	29.802	1.0455	2.0, 246.0	-0.23
CC004/TauUncJ	m	63.75	58.25	8	20.596	0.9138	9.0, 155.0	-0.23
CC006/TauUncJ	f	24.25	13.745	4	6.8723	0.5668	5.0, 37.0	-1.38
CC006/TauUncJ	m	29.75	13.646	8	4.8246	0.4587	6.0, 49.0	-0.97
CC009/UncJ	f	49.0	42.447	8	15.007	0.8663	10.0, 124.0	-0.87
CC009/UncJ	m	50.75	35.816	8	12.663	0.7057	5.0, 104.0	-0.52
CC010/GeniUncJ	f	78.0	11.853	5	5.3009	0.152	64.0, 95.0	-0.28
CC013/GeniUncJ	f	113.9	56.49	8	19.974	0.4961	10.0, 186.0	0.45
CC013/GeniUncJ	m	73.75	34.033	4	17.017	0.4615	26.0, 101.0	-0.01
CC017/UncJ	f	190.7	35.217	6	14.377	0.1847	133.0, 230.0	2.02
CC017/UncJ	m	121.4	70.71	5	31.622	0.5824	2.0, 184.0	1.03
CC018/UncJ	f	20.375	22.006	8	7.7803	1.0801	3.0, 69.0	-1.46
CC018/UncJ	m	26.75	17.277	8	6.1084	0.6459	9.0, 58.0	-1.04
CC019/TauUncJ	f	101.6	39.229	7	14.827	0.3862	49.0, 150.0	0.2
CC019/TauUncJ	m	57.75	53.14	8	18.786	0.9201	1.0, 152.0	-0.36
CC024/GeniUncJ	f	105.7	50.98	7	19.27	0.4823	30.0, 177.0	0.28
CC024/GeniUncJ	m	42.75	64.14	8	22.678	1.5005	2.0, 175.0	-0.69
CC025/GeniUncJ	f	66.4	55.6	5	24.865	0.8373	4.0, 122.0	-0.52
CC025/GeniUncJ	m	45.1	42.577	10	13.464	0.944	1.0, 104.0	-0.64
CC026/GeniUncJ	f	143.4	79.11	8	27.97	0.5518	4.0, 207.0	1.05
CC026/GeniUncJ	m	183.9	34.123	8	12.064	0.1856	145.0, 255.0	2.4
CC032/GeniUncJ	f	36.125	29.435	8	10.407	0.8148	9.0, 81.0	-1.14
CC032/GeniUncJ	m	57.12	32.896	8	11.63	0.5759	3.0, 112.0	-0.38
CC040/TauUncJ	f	113.0	52.97	8	18.728	0.4688	7.0, 179.0	0.43
CC040/TauUncJ	m	61.57	44.999	7	17.008	0.7308	3.0, 110.0	-0.28
CC041/TauUncJ	f	24.5	20.956	8	7.409	0.8553	6.0, 57.0	-1.37
CC041/TauUncJ	m	49.5	10.029	8	3.5456	0.2026	31.0, 59.0	-0.54
CC051/TauUncJ	f	161.2	37.754	8	13.348	0.2341	100.0, 208.0	1.41
CC051/TauUncJ	m	149.8	57.7	9	19.232	0.3852	33.0, 229.0	1.65
CC068/TauUncJ	f	116.4	53.92	5	24.113	0.4632	45.0, 174.0	0.5
CC068/TauUncJ	m	65.25	21.605	8	7.6386	0.3311	41.0, 99.0	-0.2

LEAST SQUARES MEANS (MODEL-ADJUSTED)

Strain	Sex	Mean	SEM	UpperCL	LowerCL
CC002/UncJ	f	95.5	16.8647	128.7448	62.2552
CC002/UncJ	m	43.8571	18.0291	79.3973	8.317
CC003/UncJ	f	132.8	21.3323	174.8517	90.7483
CC003/UncJ	m	140.75	23.8502	187.7652	93.7348
CC004/TauUncJ	f	80.625	16.8647	113.8698	47.3802
CC004/TauUncJ	m	63.75	16.8647	96.9948	30.5052
CC006/TauUncJ	f	24.25	23.8502	71.2652	-22.7652
CC006/TauUncJ	m	29.75	16.8647	62.9948	-3.4948
CC009/UncJ	f	49.0	16.8647	82.2448	15.7552
CC009/UncJ	m	50.75	16.8647	83.9948	17.5052
CC013/GeniUncJ	f	113.875	16.8647	147.1198	80.6302
CC013/GeniUncJ	m	73.75	23.8502	120.7652	26.7348
CC017/UncJ	f	190.6667	19.4736	229.0545	152.2789
CC017/UncJ	m	121.4	21.3323	163.4517	79.3483
CC018/UncJ	f	20.375	16.8647	53.6198	-12.8698
CC018/UncJ	m	26.75	16.8647	59.9948	-6.4948
CC019/TauUncJ	f	101.5714	18.0291	137.1116	66.0312
CC019/TauUncJ	m	57.75	16.8647	90.9948	24.5052
CC024/GeniUncJ	f	105.7143	18.0291	141.2545	70.1741
CC024/GeniUncJ	m	42.75	16.8647	75.9948	9.5052
CC025/GeniUncJ	f	66.4	21.3323	108.4517	24.3483
CC025/GeniUncJ	m	45.1	15.0842	74.8351	15.3649
CC026/GeniUncJ	f	143.375	16.8647	176.6198	110.1302
CC026/GeniUncJ	m	183.875	16.8647	217.1198	150.6302
CC032/GeniUncJ	f	36.125	16.8647	69.3698	2.8802
CC032/GeniUncJ	m	57.125	16.8647	90.3698	23.8802
CC040/TauUncJ	f	113.0	16.8647	146.2448	79.7552
CC040/TauUncJ	m	61.5714	18.0291	97.1116	26.0312
CC041/TauUncJ	f	24.5	16.8647	57.7448	-8.7448
CC041/TauUncJ	m	49.5	16.8647	82.7448	16.2552
CC051/TauUncJ	f	161.25	16.8647	194.4948	128.0052
CC051/TauUncJ	m	149.7778	15.9002	181.1213	118.4343
CC068/TauUncJ	f	116.4	21.3323	158.4517	74.3483
CC068/TauUncJ	m	65.25	16.8647	98.4948	32.0052

LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED

Strain	Sex	Mean	SEM	UpperCL	LowerCL
CC002/UncJ	both	69.6786	12.3437	94.0113	45.3459
CC003/UncJ	both	136.775	15.9992	168.3138	105.2362
CC004/TauUncJ	both	72.1875	11.9251	95.6951	48.6799
CC006/TauUncJ	both	27.0	14.6052	55.7908	-1.7908
CC009/UncJ	both	49.875	11.9251	73.3826	26.3674
CC013/GeniUncJ	both	93.8125	14.6052	122.6033	65.0217
CC017/UncJ	both	156.0333	14.442	184.5025	127.5642
CC018/UncJ	both	23.5625	11.9251	47.0701	0.0549
CC019/TauUncJ	both	79.6607	12.3437	103.9934	55.328
CC024/GeniUncJ	both	74.2321	12.3437	98.5648	49.8994
CC025/GeniUncJ	both	55.75	13.0633	81.5013	29.9987
CC026/GeniUncJ	both	163.625	11.9251	187.1326	140.1174
CC032/GeniUncJ	both	46.625	11.9251	70.1326	23.1174
CC040/TauUncJ	both	87.2857	12.3437	111.6184	62.953
CC041/TauUncJ	both	37.0	11.9251	60.5076	13.4924
CC051/TauUncJ	both	155.5139	11.5891	178.3592	132.6686
CC068/TauUncJ	both	90.825	13.5967	117.6278	64.0222

INDIVIDUAL ANIMAL VALUES

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GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA