Phenotype measure:   Neuner1   Ymaze_returns_16mo

ID, description, units MPD:65945   Ymaze_returns_16mo   percentage of alternating arm returns in Y-maze   [%]  16 mo
Data set, strains Neuner1   F1 AD-BXD   16 strains     sex: both     age: 8-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage of alternating arm returns in Y-maze 16 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains12 strains
Mean of the strain means33.108   % 27.73   %
Median of the strain means29.333   % 29.166   %
SD of the strain means± 13.438 ± 6.5533
Coefficient of variation (CV)0.4059 0.2363
Min–max range of strain means14.5   –   61.0   % 16.333   –   36.818   %
Mean sample size per strain2.8   mice 4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6.7202 6.7202 0.0612 0.8063
strain 5 893.5666 178.7133 1.6271 0.1821
sex:strain 5 749.8924 149.9785 1.3655 0.2641
Residuals 31 3404.7976 109.8322


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 32.0 0.0   1   0.0 0.0 32.0, 32.0 -0.08
(B6.5XFAD x B6)F1-ADtg m 36.818 16.792   22 3.58 0.4561 1.39
(B6.5XFAD x B6)F1-Ntg f 32.143 7.5593   7 2.8571 0.2352 22.0, 43.0 -0.07
(B6.5XFAD x B6)F1-Ntg m 32.857 6.4402   7 2.4342 0.196 21.0, 42.0 0.78
(B6.5XFAD x BXD44)F1-ADtg f 22.333 8.3865   3 4.8419 0.3755 17.0, 32.0 -0.8
(B6.5XFAD x BXD44)F1-ADtg m 24.25 10.813   4 5.4064 0.4459 14.0, 39.0 -0.53
(B6.5XFAD x BXD44)F1-Ntg m 35.0 2.8284   2   2.0 0.0808 33.0, 37.0 1.11
(B6.5XFAD x BXD61)F1-ADtg f 46.0 10.223   5 4.5717 0.2222 33.0, 58.0 0.96
(B6.5XFAD x BXD61)F1-ADtg m 20.0 0.0   1   0.0 0.0 20.0, 20.0 -1.18
(B6.5XFAD x BXD61)F1-Ntg f 29.333 4.0415   3 2.3333 0.1378 25.0, 33.0 -0.28
(B6.5XFAD x BXD61)F1-Ntg m 29.333 4.0415   3 2.3333 0.1378 25.0, 33.0 0.24
(B6.5XFAD x BXD62)F1-ADtg f 25.0 15.556   2   11.0 0.6223 14.0, 36.0 -0.6
(B6.5XFAD x BXD62)F1-Ntg f 46.0 0.0   1   0.0 0.0 46.0, 46.0 0.96
(B6.5XFAD x BXD69)F1-ADtg f 20.0 0.0   1   0.0 0.0 20.0, 20.0 -0.98
(B6.5XFAD x BXD69)F1-ADtg m 24.5 23.335   2   16.5 0.9524 8.0, 41.0 -0.49
(B6.5XFAD x BXD69)F1-Ntg f 14.5 6.364   2   4.5 0.4389 10.0, 19.0 -1.38
(B6.5XFAD x BXD69)F1-Ntg m 32.5 6.364   2   4.5 0.1958 28.0, 37.0 0.73
(B6.5XFAD x BXD70)F1-ADtg m 20.333 22.189   3 12.811 1.0912 -1.13
(B6.5XFAD x BXD70)F1-Ntg f 49.0 15.556   2   11.0 0.3175 38.0, 60.0 1.18
(B6.5XFAD x BXD70)F1-Ntg m 29.0 1.4142   2   1.0 0.0488 28.0, 30.0 0.19
(B6.5XFAD x BXD77)F1-ADtg f 61.0 55.15   2   39.0 0.9042 22.0, 100.0 2.08
(B6.5XFAD x BXD77)F1-Ntg f 25.6 10.945   5 4.8949 0.4276 15.0, 43.0 -0.56
(B6.5XFAD x D2)F1-ADtg f 27.5 38.891   2   27.5 1.4142 -0.42
(B6.5XFAD x D2)F1-ADtg m 31.833 9.1524   6 3.7365 0.2875 17.0, 39.0 0.63
(B6.5XFAD x D2)F1-Ntg m 16.333 12.858   3 7.4237 0.7872 7.0, 31.0 -1.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg f 32.1429 3.9611 40.2216 24.0641
(B6.5XFAD x B6)F1-Ntg m 32.8571 3.9611 40.9359 24.7784
(B6.5XFAD x BXD44)F1-ADtg f 22.3333 6.0507 34.6738 9.9929
(B6.5XFAD x BXD44)F1-ADtg m 24.25 5.24 34.9371 13.5629
(B6.5XFAD x BXD61)F1-Ntg f 29.3333 6.0507 41.6738 16.9929
(B6.5XFAD x BXD61)F1-Ntg m 29.3333 6.0507 41.6738 16.9929
(B6.5XFAD x BXD69)F1-Ntg f 14.5 7.4105 29.6139 -0.6139
(B6.5XFAD x BXD69)F1-Ntg m 32.5 7.4105 47.6139 17.3861
(B6.5XFAD x BXD70)F1-Ntg f 49.0 7.4105 64.1139 33.8861
(B6.5XFAD x BXD70)F1-Ntg m 29.0 7.4105 44.1139 13.8861
(B6.5XFAD x D2)F1-ADtg f 27.5 7.4105 42.6139 12.3861
(B6.5XFAD x D2)F1-ADtg m 31.8333 4.2785 40.5593 23.1073


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg both 32.5 2.8009 38.2125 26.7875
(B6.5XFAD x BXD44)F1-ADtg both 23.2917 4.0021 31.4541 15.1292
(B6.5XFAD x BXD61)F1-Ntg both 29.3333 4.2785 38.0593 20.6073
(B6.5XFAD x BXD69)F1-Ntg both 23.5 5.24 34.1871 12.8129
(B6.5XFAD x BXD70)F1-Ntg both 39.0 5.24 49.6871 28.3129
(B6.5XFAD x D2)F1-ADtg both 29.6667 4.2785 38.3927 20.9407




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA