Phenotype measure:   Neuner1   Ymaze_returns_12mo

ID, description, units MPD:65943   Ymaze_returns_12mo   percentage of alternating arm returns in Y-maze   [%]  12 mo
Data set, strains Neuner1   F1 AD-BXD   49 strains     sex: both     age: 8-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage of alternating arm returns in Y-maze 12 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested46 strains35 strains
Mean of the strain means33.201   % 26.005   %
Median of the strain means31.75   % 27.667   %
SD of the strain means± 9.6753 ± 6.63
Coefficient of variation (CV)0.2914 0.255
Min–max range of strain means14.0   –   69.67   % 5.0   –   37.0   %
Mean sample size per strain4.6   mice 4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1802.4918 1802.4918 8.7952 0.0033
strain 25 8039.1748 321.567 1.5691 0.0459
sex:strain 25 5448.2864 217.9315 1.0634 0.3865
Residuals 240 49185.9374 204.9414


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 31.75 18.209   4 9.1047 0.5735 15.0, 48.0 -0.15
(B6.5XFAD x B6)F1-ADtg m 37.0 15.611   21 3.4066 0.4219 23.0, 100.0 1.66
(B6.5XFAD x B6)F1-Ntg f 44.0 21.616   9 7.2053 0.4913 30.0, 100.0 1.12
(B6.5XFAD x B6)F1-Ntg m 28.5 12.501   10 3.9532 0.4386 4.0, 50.0 0.38
(B6.5XFAD x BXD100)F1-ADtg f 50.0 14.142   2   10.0 0.2828 40.0, 60.0 1.74
(B6.5XFAD x BXD100)F1-ADtg m 28.0 24.495   7 9.2582 0.8748 0.3
(B6.5XFAD x BXD100)F1-Ntg f 31.75 9.4648   4 4.7324 0.2981 18.0, 38.0 -0.15
(B6.5XFAD x BXD100)F1-Ntg m 29.0 10.139   6 4.1392 0.3496 10.0, 40.0 0.45
(B6.5XFAD x BXD14)F1-ADtg f 29.0 10.817   3 6.245 0.373 17.0, 38.0 -0.43
(B6.5XFAD x BXD14)F1-Ntg f 34.0 2.8284   2   2.0 0.0832 32.0, 36.0 0.08
(B6.5XFAD x BXD16)F1-ADtg f 25.0 11.314   2   8.0 0.4525 17.0, 33.0 -0.85
(B6.5XFAD x BXD22)F1-ADtg f 35.0 8.4853   2   6.0 0.2424 29.0, 41.0 0.19
(B6.5XFAD x BXD22)F1-Ntg f 27.0 19.799   2   14.0 0.7333 13.0, 41.0 -0.64
(B6.5XFAD x BXD32)F1-ADtg f 69.67 29.092   3 16.796 0.4176 42.0, 100.0 3.77
(B6.5XFAD x BXD32)F1-ADtg m 27.667 20.257   3 11.695 0.7322 5.0, 44.0 0.25
(B6.5XFAD x BXD32)F1-Ntg f 29.667 22.189   3 12.811 0.7479 5.0, 48.0 -0.37
(B6.5XFAD x BXD32)F1-Ntg m 26.0 1.4142   2   1.0 0.0544 25.0, 27.0 0.0
(B6.5XFAD x BXD44)F1-ADtg f 26.917 10.799   12 3.1175 0.4012 10.0, 44.0 -0.65
(B6.5XFAD x BXD44)F1-ADtg m 25.667 10.69   6 4.364 0.4165 13.0, 36.0 -0.05
(B6.5XFAD x BXD44)F1-Ntg m 18.333 2.0817   3 1.2019 0.1135 16.0, 20.0 -1.16
(B6.5XFAD x BXD51)F1-ADtg f 29.2 5.8481   5 2.6153 0.2003 19.0, 33.0 -0.41
(B6.5XFAD x BXD51)F1-Ntg f 29.0 12.728   2   9.0 0.4389 20.0, 38.0 -0.43
(B6.5XFAD x BXD55)F1-ADtg f 49.75 18.283   4 9.1413 0.3675 27.0, 66.0 1.71
(B6.5XFAD x BXD55)F1-Ntg f 32.0 0.0   1   0.0 0.0 32.0, 32.0 -0.12
(B6.5XFAD x BXD56)F1-ADtg m 25.0 6.9282   3 4.0 0.2771 17.0, 29.0 -0.15
(B6.5XFAD x BXD56)F1-Ntg f 37.0 8.4853   2   6.0 0.2293 31.0, 43.0 0.39
(B6.5XFAD x BXD56)F1-Ntg m 11.0 0.0   1   0.0 0.0 11.0, 11.0 -2.26
(B6.5XFAD x BXD60)F1-ADtg f 39.75 15.327   4 7.6635 0.3856 22.0, 59.0 0.68
(B6.5XFAD x BXD60)F1-ADtg m 25.8 6.0581   5 2.7092 0.2348 17.0, 33.0 -0.03
(B6.5XFAD x BXD60)F1-Ntg f 24.5 2.1213   2   1.5 0.0866 23.0, 26.0 -0.9
(B6.5XFAD x BXD61)F1-ADtg f 30.143 13.558   7 5.1243 0.4498 8.0, 43.0 -0.32
(B6.5XFAD x BXD61)F1-ADtg m 23.0 20.664   3 11.93 0.8984 -0.45
(B6.5XFAD x BXD61)F1-Ntg f 37.6 21.055   5 9.4159 0.56 13.0, 70.0 0.45
(B6.5XFAD x BXD61)F1-Ntg m 24.8 20.192   5 9.03 0.8142 -0.18
(B6.5XFAD x BXD62)F1-ADtg f 44.0 13.342   4 6.6708 0.3032 29.0, 61.0 1.12
(B6.5XFAD x BXD62)F1-ADtg m 19.5 2.1213   2   1.5 0.1088 18.0, 21.0 -0.98
(B6.5XFAD x BXD62)F1-Ntg f 27.667 8.0829   3 4.6667 0.2922 19.0, 35.0 -0.57
(B6.5XFAD x BXD62)F1-Ntg m 15.667 15.044   3 8.6859 0.9603 -1.56
(B6.5XFAD x BXD65)F1-ADtg f 30.667 10.501   6 4.2869 0.3424 17.0, 42.0 -0.26
(B6.5XFAD x BXD65)F1-ADtg m 28.5 4.9497   2   3.5 0.1737 25.0, 32.0 0.38
(B6.5XFAD x BXD65)F1-Ntg f 34.143 6.669   7 2.5207 0.1953 24.0, 44.0 0.1
(B6.5XFAD x BXD65)F1-Ntg m 24.0 22.627   2   16.0 0.9428 8.0, 40.0 -0.3
(B6.5XFAD x BXD66)F1-ADtg f 47.0 12.728   2   9.0 0.2708 38.0, 56.0 1.43
(B6.5XFAD x BXD66)F1-ADtg m 34.0 13.54   4 6.77 0.3982 17.0, 50.0 1.21
(B6.5XFAD x BXD66)F1-Ntg f 26.0 0.0   1   0.0 0.0 26.0, 26.0 -0.74
(B6.5XFAD x BXD66)F1-Ntg m 26.333 12.22   3 7.0553 0.4641 13.0, 37.0 0.05
(B6.5XFAD x BXD68)F1-ADtg f 27.0 8.544   3 4.9329 0.3164 19.0, 36.0 -0.64
(B6.5XFAD x BXD68)F1-ADtg m 30.571 10.565   7 3.9932 0.3456 20.0, 46.0 0.69
(B6.5XFAD x BXD68)F1-Ntg f 33.1 11.949   10 3.7784 0.361 15.0, 50.0 -0.01
(B6.5XFAD x BXD68)F1-Ntg m 32.0 11.314   2   8.0 0.3536 24.0, 40.0 0.9
(B6.5XFAD x BXD69)F1-ADtg f 34.833 8.4004   6 3.4294 0.2412 25.0, 47.0 0.17
(B6.5XFAD x BXD69)F1-ADtg m 23.2 16.559   5 7.4054 0.7137 -0.42
(B6.5XFAD x BXD69)F1-Ntg f 25.4 12.157   5 5.4369 0.4786 14.0, 44.0 -0.81
(B6.5XFAD x BXD69)F1-Ntg m 29.833 9.1742   6 3.7454 0.3075 19.0, 39.0 0.58
(B6.5XFAD x BXD70)F1-ADtg f 32.0 0.0   1   0.0 0.0 32.0, 32.0 -0.12
(B6.5XFAD x BXD70)F1-ADtg m 29.667 4.0415   3 2.3333 0.1362 26.0, 34.0 0.55
(B6.5XFAD x BXD70)F1-Ntg f 31.0 0.0   1   0.0 0.0 31.0, 31.0 -0.23
(B6.5XFAD x BXD70)F1-Ntg m 5.0 7.0711   2   5.0 1.4142 -3.17
(B6.5XFAD x BXD75)F1-ADtg f 41.0 21.525   4 10.763 0.525 19.0, 70.0 0.81
(B6.5XFAD x BXD75)F1-ADtg m 29.0 5.831   4 2.9155 0.2011 21.0, 35.0 0.45
(B6.5XFAD x BXD75)F1-Ntg f 25.167 12.189   6 4.9761 0.4843 11.0, 44.0 -0.83
(B6.5XFAD x BXD75)F1-Ntg m 31.0 0.0   1   0.0 0.0 31.0, 31.0 0.75
(B6.5XFAD x BXD77)F1-ADtg f 28.6 10.9   5 4.8744 0.3811 13.0, 38.0 -0.48
(B6.5XFAD x BXD77)F1-ADtg m 30.667 12.503   3 7.2188 0.4077 18.0, 43.0 0.7
(B6.5XFAD x BXD77)F1-Ntg f 28.7 11.672   10 3.691 0.4067 6.0, 46.0 -0.47
(B6.5XFAD x BXD77)F1-Ntg m 15.667 10.671   6 4.3563 0.6811 -1.56
(B6.5XFAD x BXD81)F1-ADtg f 40.167 12.481   6 5.0952 0.3107 26.0, 53.0 0.72
(B6.5XFAD x BXD81)F1-Ntg f 48.4 6.8775   5 3.0757 0.1421 38.0, 54.0 1.57
(B6.5XFAD x BXD87)F1-ADtg f 23.9 7.2026   10 2.2777 0.3014 11.0, 37.0 -0.96
(B6.5XFAD x BXD87)F1-ADtg m 24.5 10.661   4 5.3307 0.4352 13.0, 38.0 -0.23
(B6.5XFAD x BXD87)F1-Ntg f 15.667 5.1316   3 2.9627 0.3275 10.0, 20.0 -1.81
(B6.5XFAD x BXD87)F1-Ntg m 30.0 0.0   1   0.0 0.0 30.0, 30.0 0.6
(B6.5XFAD x BXD89)F1-ADtg m 25.0 0.0   1   0.0 0.0 25.0, 25.0 -0.15
(B6.5XFAD x BXD89)F1-Ntg f 34.5 4.9497   2   3.5 0.1435 31.0, 38.0 0.13
(B6.5XFAD x BXD89)F1-Ntg m 32.0 7.0711   2   5.0 0.221 27.0, 37.0 0.9
(B6.5XFAD x BXD99)F1-ADtg f 14.0 0.0   1   0.0 0.0 14.0, 14.0 -1.98
(B6.5XFAD x BXD99)F1-Ntg f 23.0 0.0   1   0.0 0.0 23.0, 23.0 -1.05
(B6.5XFAD x D2)F1-ADtg f 36.235 20.299   17 4.9233 0.5602 8.0, 100.0 0.31
(B6.5XFAD x D2)F1-ADtg m 30.5 12.672   8 4.4801 0.4155 11.0, 43.0 0.68
(B6.5XFAD x D2)F1-Ntg f 32.417 11.0   12 3.1753 0.3393 18.0, 56.0 -0.08
(B6.5XFAD x D2)F1-Ntg m 33.8 5.8907   5 2.6344 0.1743 29.0, 43.0 1.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 31.75 7.1579 45.8503 17.6497
(B6.5XFAD x B6)F1-ADtg m 37.0 3.124 43.1539 30.8461
(B6.5XFAD x B6)F1-Ntg f 44.0 4.7719 53.4002 34.5998
(B6.5XFAD x B6)F1-Ntg m 28.5 4.527 37.4178 19.5822
(B6.5XFAD x BXD100)F1-ADtg f 50.0 10.1228 69.9408 30.0592
(B6.5XFAD x BXD100)F1-ADtg m 28.0 5.4109 38.6588 17.3412
(B6.5XFAD x BXD100)F1-Ntg f 31.75 7.1579 45.8503 17.6497
(B6.5XFAD x BXD100)F1-Ntg m 29.0 5.8444 40.5129 17.4871
(B6.5XFAD x BXD32)F1-ADtg f 69.6667 8.2652 85.9483 53.385
(B6.5XFAD x BXD32)F1-ADtg m 27.6667 8.2652 43.9483 11.385
(B6.5XFAD x BXD32)F1-Ntg f 29.6667 8.2652 45.9483 13.385
(B6.5XFAD x BXD32)F1-Ntg m 26.0 10.1228 45.9408 6.0592
(B6.5XFAD x BXD44)F1-ADtg f 26.9167 4.1326 35.0575 18.7759
(B6.5XFAD x BXD44)F1-ADtg m 25.6667 5.8444 37.1795 14.1538
(B6.5XFAD x BXD60)F1-ADtg f 39.75 7.1579 53.8503 25.6497
(B6.5XFAD x BXD60)F1-ADtg m 25.8 6.4022 38.4117 13.1883
(B6.5XFAD x BXD61)F1-ADtg f 30.1429 5.4109 40.8017 19.484
(B6.5XFAD x BXD61)F1-ADtg m 23.0 8.2652 39.2816 6.7184
(B6.5XFAD x BXD61)F1-Ntg f 37.6 6.4022 50.2117 24.9883
(B6.5XFAD x BXD61)F1-Ntg m 24.8 6.4022 37.4117 12.1883
(B6.5XFAD x BXD62)F1-ADtg f 44.0 7.1579 58.1003 29.8997
(B6.5XFAD x BXD62)F1-ADtg m 19.5 10.1228 39.4408 -0.4408
(B6.5XFAD x BXD62)F1-Ntg f 27.6667 8.2652 43.9483 11.385
(B6.5XFAD x BXD62)F1-Ntg m 15.6667 8.2652 31.9483 -0.615
(B6.5XFAD x BXD65)F1-ADtg f 30.6667 5.8444 42.1795 19.1538
(B6.5XFAD x BXD65)F1-ADtg m 28.5 10.1228 48.4408 8.5592
(B6.5XFAD x BXD65)F1-Ntg f 34.1429 5.4109 44.8017 23.484
(B6.5XFAD x BXD65)F1-Ntg m 24.0 10.1228 43.9408 4.0592
(B6.5XFAD x BXD66)F1-ADtg f 47.0 10.1228 66.9408 27.0592
(B6.5XFAD x BXD66)F1-ADtg m 34.0 7.1579 48.1003 19.8997
(B6.5XFAD x BXD68)F1-ADtg f 27.0 8.2652 43.2816 10.7184
(B6.5XFAD x BXD68)F1-ADtg m 30.5714 5.4109 41.2303 19.9126
(B6.5XFAD x BXD68)F1-Ntg f 33.1 4.527 42.0178 24.1822
(B6.5XFAD x BXD68)F1-Ntg m 32.0 10.1228 51.9408 12.0592
(B6.5XFAD x BXD69)F1-ADtg f 34.8333 5.8444 46.3462 23.3205
(B6.5XFAD x BXD69)F1-ADtg m 23.2 6.4022 35.8117 10.5883
(B6.5XFAD x BXD69)F1-Ntg f 25.4 6.4022 38.0117 12.7883
(B6.5XFAD x BXD69)F1-Ntg m 29.8333 5.8444 41.3462 18.3205
(B6.5XFAD x BXD75)F1-ADtg f 41.0 7.1579 55.1003 26.8997
(B6.5XFAD x BXD75)F1-ADtg m 29.0 7.1579 43.1003 14.8997
(B6.5XFAD x BXD77)F1-ADtg f 28.6 6.4022 41.2117 15.9883
(B6.5XFAD x BXD77)F1-ADtg m 30.6667 8.2652 46.9483 14.385
(B6.5XFAD x BXD77)F1-Ntg f 28.7 4.527 37.6178 19.7822
(B6.5XFAD x BXD77)F1-Ntg m 15.6667 5.8444 27.1795 4.1538
(B6.5XFAD x BXD87)F1-ADtg f 23.9 4.527 32.8178 14.9822
(B6.5XFAD x BXD87)F1-ADtg m 24.5 7.1579 38.6003 10.3997
(B6.5XFAD x BXD89)F1-Ntg f 34.5 10.1228 54.4408 14.5592
(B6.5XFAD x BXD89)F1-Ntg m 32.0 10.1228 51.9408 12.0592
(B6.5XFAD x D2)F1-ADtg f 36.2353 3.4721 43.0749 29.3956
(B6.5XFAD x D2)F1-ADtg m 30.5 5.0614 40.4704 20.5296
(B6.5XFAD x D2)F1-Ntg f 32.4167 4.1326 40.5575 24.2759
(B6.5XFAD x D2)F1-Ntg m 33.8 6.4022 46.4117 21.1883


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 34.375 3.9049 42.0673 26.6827
(B6.5XFAD x B6)F1-Ntg both 36.25 3.2888 42.7286 29.7714
(B6.5XFAD x BXD100)F1-ADtg both 39.0 5.7391 50.3054 27.6946
(B6.5XFAD x BXD100)F1-Ntg both 30.375 4.6204 39.4767 21.2733
(B6.5XFAD x BXD32)F1-ADtg both 48.6667 5.8444 60.1795 37.1538
(B6.5XFAD x BXD32)F1-Ntg both 27.8333 6.5342 40.7051 14.9616
(B6.5XFAD x BXD44)F1-ADtg both 26.2917 3.5789 33.3418 19.2415
(B6.5XFAD x BXD60)F1-ADtg both 32.775 4.8017 42.2338 23.3162
(B6.5XFAD x BXD61)F1-ADtg both 26.5714 4.9394 36.3016 16.8413
(B6.5XFAD x BXD61)F1-Ntg both 31.2 4.527 40.1178 22.2822
(B6.5XFAD x BXD62)F1-ADtg both 31.75 6.1989 43.9612 19.5388
(B6.5XFAD x BXD62)F1-Ntg both 21.6667 5.8444 33.1795 10.1538
(B6.5XFAD x BXD65)F1-ADtg both 29.5833 5.8444 41.0962 18.0705
(B6.5XFAD x BXD65)F1-Ntg both 29.0714 5.7391 40.3768 17.766
(B6.5XFAD x BXD66)F1-ADtg both 40.5 6.1989 52.7112 28.2888
(B6.5XFAD x BXD68)F1-ADtg both 28.7857 4.9394 38.5158 19.0556
(B6.5XFAD x BXD68)F1-Ntg both 32.55 5.5445 43.472 21.628
(B6.5XFAD x BXD69)F1-ADtg both 29.0167 4.3343 37.5548 20.4785
(B6.5XFAD x BXD69)F1-Ntg both 27.6167 4.3343 36.1548 19.0785
(B6.5XFAD x BXD75)F1-ADtg both 35.0 5.0614 44.9704 25.0296
(B6.5XFAD x BXD77)F1-ADtg both 29.6333 5.2274 39.9307 19.3359
(B6.5XFAD x BXD77)F1-Ntg both 22.1833 3.6963 29.4647 14.902
(B6.5XFAD x BXD87)F1-ADtg both 24.2 4.2347 32.5419 15.8581
(B6.5XFAD x BXD89)F1-Ntg both 33.25 7.1579 47.3503 19.1497
(B6.5XFAD x D2)F1-ADtg both 33.3676 3.0689 39.4131 27.3222
(B6.5XFAD x D2)F1-Ntg both 33.1083 3.8101 40.6138 25.6029




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA