Phenotype measure:   Neuner1   Ymaze_returns_10mo

ID, description, units MPD:65942   Ymaze_returns_10mo   percentage of alternating arm returns in Y-maze   [%]  10 mo
Data set, strains Neuner1   F1 AD-BXD   32 strains     sex: both     age: 8-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage of alternating arm returns in Y-maze 10 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested29 strains8 strains
Mean of the strain means28.639   % 25.052   %
Median of the strain means27.5   % 24.709   %
SD of the strain means± 7.4381 ± 10.226
Coefficient of variation (CV)0.2597 0.4082
Min–max range of strain means16.333   –   46.0   % 10.0   –   43.5   %
Mean sample size per strain3.5   mice 2.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.9282 4.9282 0.0397 0.8441
strain 2 1241.5839 620.7919 4.997 0.0174
sex:strain 2 227.2923 113.6462 0.9148 0.4167
Residuals 20 2484.6571 124.2329


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg m 22.667 17.039   3 9.8376 0.7517 5.0, 39.0 -0.23
(B6.5XFAD x B6)F1-Ntg f 46.0 0.0   1   0.0 0.0 46.0, 46.0 2.33
(B6.5XFAD x B6)F1-Ntg m 32.0 7.0711   2   5.0 0.221 27.0, 37.0 0.68
(B6.5XFAD x BXD100)F1-ADtg m 18.0 1.4142   2   1.0 0.0786 17.0, 19.0 -0.69
(B6.5XFAD x BXD14)F1-ADtg f 28.0 0.0   1   0.0 0.0 28.0, 28.0 -0.09
(B6.5XFAD x BXD14)F1-Ntg f 26.5 4.9497   2   3.5 0.1868 23.0, 30.0 -0.29
(B6.5XFAD x BXD16)F1-ADtg f 26.75 13.426   4 6.7129 0.5019 8.0, 39.0 -0.25
(B6.5XFAD x BXD22)F1-ADtg f 27.0 28.284   2   20.0 1.0476 7.0, 47.0 -0.22
(B6.5XFAD x BXD22)F1-Ntg f 16.333 15.177   3 8.7623 0.9292 -1.65
(B6.5XFAD x BXD2)F1-ADtg f 41.25 17.652   4 8.8259 0.4279 19.0, 62.0 1.7
(B6.5XFAD x BXD2)F1-Ntg f 17.0 0.0   1   0.0 0.0 17.0, 17.0 -1.56
(B6.5XFAD x BXD34)F1-ADtg f 18.5 17.678   2   12.5 0.9555 6.0, 31.0 -1.36
(B6.5XFAD x BXD34)F1-Ntg f 19.0 0.0   1   0.0 0.0 19.0, 19.0 -1.3
(B6.5XFAD x BXD42)F1-ADtg f 30.333 7.3711   3 4.2557 0.243 22.0, 36.0 0.23
(B6.5XFAD x BXD42)F1-Ntg f 23.0 0.0   1   0.0 0.0 23.0, 23.0 -0.76
(B6.5XFAD x BXD44)F1-ADtg f 18.2 17.866   5 7.99 0.9817 -1.4
(B6.5XFAD x BXD44)F1-ADtg m 18.5 0.70711   2   0.5 0.0382 18.0, 19.0 -0.64
(B6.5XFAD x BXD51)F1-ADtg f 27.0 15.556   4 7.7782 0.5762 11.0, 44.0 -0.22
(B6.5XFAD x BXD51)F1-Ntg f 27.25 2.63   4 1.315 0.0965 25.0, 31.0 -0.19
(B6.5XFAD x BXD55)F1-ADtg f 35.0 22.241   4 11.121 0.6355 10.0, 62.0 0.86
(B6.5XFAD x BXD55)F1-Ntg f 27.5 21.92   2   15.5 0.7971 12.0, 43.0 -0.15
(B6.5XFAD x BXD65)F1-ADtg f 34.143 9.0079   7 3.4047 0.2638 20.0, 47.0 0.74
(B6.5XFAD x BXD65)F1-ADtg m 29.0 1.4142   2   1.0 0.0488 28.0, 30.0 0.39
(B6.5XFAD x BXD65)F1-Ntg f 32.0 9.3044   8 3.2896 0.2908 24.0, 50.0 0.45
(B6.5XFAD x BXD65)F1-Ntg m 43.5 10.607   2   7.5 0.2438 36.0, 51.0 1.8
(B6.5XFAD x BXD68)F1-ADtg m 26.75 3.2016   4 1.6008 0.1197 24.0, 30.0 0.17
(B6.5XFAD x BXD68)F1-Ntg f 29.667 10.52   6 4.2947 0.3546 14.0, 43.0 0.14
(B6.5XFAD x BXD68)F1-Ntg m 10.0 0.0   1   0.0 0.0 10.0, 10.0 -1.47
(B6.5XFAD x BXD75)F1-ADtg f 26.25 9.6047   4 4.8023 0.3659 18.0, 40.0 -0.32
(B6.5XFAD x BXD75)F1-Ntg f 29.5 7.3959   6 3.0194 0.2507 19.0, 38.0 0.12
(B6.5XFAD x BXD81)F1-ADtg f 32.5 12.145   6 4.9582 0.3737 13.0, 48.0 0.52
(B6.5XFAD x BXD81)F1-Ntg f 40.8 12.05   5 5.3889 0.2953 24.0, 50.0 1.63
(B6.5XFAD x BXD87)F1-ADtg f 26.4 12.74   5 5.6974 0.4826 6.0, 40.0 -0.3
(B6.5XFAD x BXD99)F1-ADtg f 42.0 0.0   1   0.0 0.0 42.0, 42.0 1.8
(B6.5XFAD x BXD99)F1-Ntg f 29.0 0.0   1   0.0 0.0 29.0, 29.0 0.05
(B6.5XFAD x D2)F1-ADtg f 25.667 8.1445   3 4.7022 0.3173 20.0, 35.0 -0.4
(B6.5XFAD x D2)F1-Ntg f 28.0 9.9599   6 4.0661 0.3557 16.0, 42.0 -0.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x BXD44)F1-ADtg f 18.2 4.9846 28.5978 7.8022
(B6.5XFAD x BXD44)F1-ADtg m 18.5 7.8814 34.9403 2.0597
(B6.5XFAD x BXD65)F1-ADtg f 34.1429 4.2128 42.9306 25.3551
(B6.5XFAD x BXD65)F1-ADtg m 29.0 7.8814 45.4403 12.5597
(B6.5XFAD x BXD65)F1-Ntg f 32.0 3.9407 40.2202 23.7798
(B6.5XFAD x BXD65)F1-Ntg m 43.5 7.8814 59.9403 27.0597


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x BXD44)F1-ADtg both 18.35 4.6627 28.0762 8.6238
(B6.5XFAD x BXD65)F1-ADtg both 31.5714 4.4683 40.8922 22.2507
(B6.5XFAD x BXD65)F1-Ntg both 37.75 4.4058 46.9404 28.5596




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA