Phenotype measure:   Neuner1   Ymaze_returns_8mo

ID, description, units MPD:65941   Ymaze_returns_8mo   percentage of alternating arm returns in Y-maze   [%]  8 mo
Data set, strains Neuner1   F1 AD-BXD   53 strains     sex: both     age: 8-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage of alternating arm returns in Y-maze 8 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested48 strains35 strains
Mean of the strain means27.014   % 25.367   %
Median of the strain means26.6   % 26.2   %
SD of the strain means± 8.3429 ± 8.2467
Coefficient of variation (CV)0.3088 0.3251
Min–max range of strain means8.0   –   45.2   % 8.0   –   46.0   %
Mean sample size per strain4.4   mice 3.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 79.4775 79.4775 0.5224 0.4707
strain 23 6723.5879 292.3299 1.9214 0.0093
sex:strain 23 3108.2218 135.1401 0.8882 0.6143
Residuals 193 29363.7252 152.1437


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 29.8 6.7231   5 3.0067 0.2256 22.0, 40.0 0.33
(B6.5XFAD x B6)F1-ADtg m 35.385 10.397   13 2.8835 0.2938 23.0, 56.0 1.21
(B6.5XFAD x B6)F1-Ntg f 27.0 4.2426   2   3.0 0.1571 24.0, 30.0 0.0
(B6.5XFAD x B6)F1-Ntg m 28.889 12.474   9 4.1581 0.4318 14.0, 50.0 0.43
(B6.5XFAD x BXD100)F1-ADtg f 24.5 6.364   2   4.5 0.2598 20.0, 29.0 -0.3
(B6.5XFAD x BXD100)F1-ADtg m 23.429 13.062   7 4.937 0.5575 14.0, 50.0 -0.23
(B6.5XFAD x BXD100)F1-Ntg f 16.0 19.408   4 9.704 1.213 -1.32
(B6.5XFAD x BXD100)F1-Ntg m 13.167 10.61   6 4.3314 0.8058 -1.48
(B6.5XFAD x BXD14)F1-ADtg f 21.0 7.5498   3 4.3589 0.3595 13.0, 28.0 -0.72
(B6.5XFAD x BXD14)F1-Ntg f 31.0 2.8284   2   2.0 0.0912 29.0, 33.0 0.48
(B6.5XFAD x BXD16)F1-ADtg f 23.0 9.9666   4 4.9833 0.4333 13.0, 36.0 -0.48
(B6.5XFAD x BXD22)F1-ADtg f 22.5 24.749   2   17.5 1.0999 5.0, 40.0 -0.54
(B6.5XFAD x BXD22)F1-Ntg f 21.667 4.0415   3 2.3333 0.1865 17.0, 24.0 -0.64
(B6.5XFAD x BXD2)F1-ADtg f 25.75 4.9917   4 2.4958 0.1939 22.0, 33.0 -0.15
(B6.5XFAD x BXD2)F1-Ntg f 42.0 0.0   1   0.0 0.0 42.0, 42.0 1.8
(B6.5XFAD x BXD32)F1-ADtg f 43.0 11.79   3 6.8069 0.2742 33.0, 56.0 1.92
(B6.5XFAD x BXD32)F1-ADtg m 30.333 6.8069   3 3.9299 0.2244 25.0, 38.0 0.6
(B6.5XFAD x BXD32)F1-Ntg f 38.0 18.682   3 10.786 0.4916 18.0, 55.0 1.32
(B6.5XFAD x BXD32)F1-Ntg m 29.0 29.698   2   21.0 1.0241 8.0, 50.0 0.44
(B6.5XFAD x BXD34)F1-ADtg f 35.5 12.021   2   8.5 0.3386 27.0, 44.0 1.02
(B6.5XFAD x BXD34)F1-Ntg f 32.0 0.0   1   0.0 0.0 32.0, 32.0 0.6
(B6.5XFAD x BXD42)F1-ADtg f 17.667 9.0185   3 5.2068 0.5105 9.0, 27.0 -1.12
(B6.5XFAD x BXD42)F1-Ntg f 8.0 0.0   1   0.0 0.0 8.0, 8.0 -2.28
(B6.5XFAD x BXD44)F1-ADtg f 25.0 13.705   12 3.9562 0.5482 10.0, 50.0 -0.24
(B6.5XFAD x BXD44)F1-ADtg m 25.625 13.948   8 4.9314 0.5443 10.0, 42.0 0.03
(B6.5XFAD x BXD44)F1-Ntg m 24.333 8.0829   3 4.6667 0.3322 15.0, 29.0 -0.13
(B6.5XFAD x BXD51)F1-ADtg f 26.2 14.584   5 6.5223 0.5567 12.0, 45.0 -0.1
(B6.5XFAD x BXD51)F1-Ntg f 39.75 19.363   4 9.6814 0.4871 18.0, 64.0 1.53
(B6.5XFAD x BXD55)F1-ADtg f 34.429 12.164   7 4.5974 0.3533 21.0, 54.0 0.89
(B6.5XFAD x BXD55)F1-Ntg f 26.5 3.5355   2   2.5 0.1334 24.0, 29.0 -0.06
(B6.5XFAD x BXD56)F1-ADtg m 15.0 5.0   3 2.8868 0.3333 10.0, 20.0 -1.26
(B6.5XFAD x BXD56)F1-Ntg f 33.0 0.0   2   0.0 0.0 33.0, 33.0 0.72
(B6.5XFAD x BXD56)F1-Ntg m 8.0 0.0   1   0.0 0.0 8.0, 8.0 -2.11
(B6.5XFAD x BXD60)F1-ADtg f 27.75 10.308   4 5.1539 0.3715 17.0, 38.0 0.09
(B6.5XFAD x BXD60)F1-ADtg m 26.2 14.464   5 6.4684 0.5521 12.0, 50.0 0.1
(B6.5XFAD x BXD60)F1-Ntg f 28.333 7.5056   3 4.3333 0.2649 21.0, 36.0 0.16
(B6.5XFAD x BXD61)F1-ADtg f 18.286 16.286   7 6.1556 0.8906 -1.05
(B6.5XFAD x BXD61)F1-ADtg m 35.333 13.051   3 7.5351 0.3694 25.0, 50.0 1.21
(B6.5XFAD x BXD61)F1-Ntg f 20.0 12.748   5 5.7009 0.6374 -0.84
(B6.5XFAD x BXD61)F1-Ntg m 29.0 12.442   6 5.0794 0.429 14.0, 50.0 0.44
(B6.5XFAD x BXD62)F1-ADtg f 38.0 20.075   3 11.59 0.5283 15.0, 52.0 1.32
(B6.5XFAD x BXD62)F1-ADtg m 46.0 5.6569   2   4.0 0.123 42.0, 50.0 2.5
(B6.5XFAD x BXD62)F1-Ntg f 12.667 3.7859   3 2.1858 0.2989 10.0, 17.0 -1.72
(B6.5XFAD x BXD62)F1-Ntg m 28.0 24.331   3 14.048 0.869 0.32
(B6.5XFAD x BXD65)F1-ADtg f 27.571 5.2554   7 1.9863 0.1906 18.0, 33.0 0.07
(B6.5XFAD x BXD65)F1-ADtg m 30.0 0.0   1   0.0 0.0 30.0, 30.0 0.56
(B6.5XFAD x BXD65)F1-Ntg f 34.75 3.6154   8 1.2783 0.104 32.0, 43.0 0.93
(B6.5XFAD x BXD65)F1-Ntg m 27.5 0.70711   2   0.5 0.0257 27.0, 28.0 0.26
(B6.5XFAD x BXD66)F1-ADtg f 17.0 0.0   1   0.0 0.0 17.0, 17.0 -1.2
(B6.5XFAD x BXD66)F1-ADtg m 13.25 17.951   4 8.9757 1.3548 -1.47
(B6.5XFAD x BXD66)F1-Ntg m 13.0 12.53   3 7.2342 0.9638 -1.5
(B6.5XFAD x BXD68)F1-ADtg f 20.667 10.97   3 6.3333 0.5308 12.0, 33.0 -0.76
(B6.5XFAD x BXD68)F1-ADtg m 26.143 13.057   7 4.935 0.4994 7.0, 50.0 0.09
(B6.5XFAD x BXD68)F1-Ntg f 26.889 13.532   9 4.5106 0.5033 6.0, 50.0 -0.01
(B6.5XFAD x BXD68)F1-Ntg m 30.0 5.6569   2   4.0 0.1886 26.0, 34.0 0.56
(B6.5XFAD x BXD69)F1-ADtg f 39.25 7.5   4 3.75 0.1911 29.0, 47.0 1.47
(B6.5XFAD x BXD69)F1-ADtg m 27.0 4.2426   2   3.0 0.1571 24.0, 30.0 0.2
(B6.5XFAD x BXD69)F1-Ntg f 19.25 4.5   4 2.25 0.2338 14.0, 23.0 -0.93
(B6.5XFAD x BXD69)F1-Ntg m 35.5 6.364   2   4.5 0.1793 31.0, 40.0 1.23
(B6.5XFAD x BXD70)F1-ADtg f 17.0 0.0   1   0.0 0.0 17.0, 17.0 -1.2
(B6.5XFAD x BXD70)F1-ADtg m 33.667 14.012   3 8.0898 0.4162 20.0, 48.0 1.01
(B6.5XFAD x BXD70)F1-Ntg f 27.667 4.7258   3 2.7285 0.1708 24.0, 33.0 0.08
(B6.5XFAD x BXD70)F1-Ntg m 26.0 12.728   2   9.0 0.4895 17.0, 35.0 0.08
(B6.5XFAD x BXD75)F1-ADtg f 23.75 6.3966   4 3.1983 0.2693 17.0, 32.0 -0.39
(B6.5XFAD x BXD75)F1-ADtg m 18.75 8.6554   4 4.3277 0.4616 9.0, 27.0 -0.8
(B6.5XFAD x BXD75)F1-Ntg f 22.667 11.483   6 4.688 0.5066 6.0, 42.0 -0.52
(B6.5XFAD x BXD75)F1-Ntg m 22.0 0.0   1   0.0 0.0 22.0, 22.0 -0.41
(B6.5XFAD x BXD77)F1-ADtg f 32.0 14.543   5 6.5038 0.4545 17.0, 56.0 0.6
(B6.5XFAD x BXD77)F1-ADtg m 15.0 13.748   3 7.9373 0.9165 -1.26
(B6.5XFAD x BXD77)F1-Ntg f 25.4 11.815   10 3.7363 0.4652 13.0, 53.0 -0.19
(B6.5XFAD x BXD77)F1-Ntg m 28.333 12.738   6 5.2004 0.4496 14.0, 50.0 0.36
(B6.5XFAD x BXD81)F1-ADtg f 37.667 15.175   6 6.195 0.4029 17.0, 57.0 1.28
(B6.5XFAD x BXD81)F1-Ntg f 45.2 4.4385   5 1.9849 0.0982 38.0, 50.0 2.18
(B6.5XFAD x BXD87)F1-ADtg f 20.3 11.47   10 3.6272 0.565 -0.8
(B6.5XFAD x BXD87)F1-ADtg m 22.75 8.1803   4 4.0901 0.3596 11.0, 30.0 -0.32
(B6.5XFAD x BXD87)F1-Ntg f 17.0 5.5678   3 3.2146 0.3275 11.0, 22.0 -1.2
(B6.5XFAD x BXD87)F1-Ntg m 33.0 0.0   1   0.0 0.0 33.0, 33.0 0.93
(B6.5XFAD x BXD89)F1-ADtg m 13.0 0.0   1   0.0 0.0 13.0, 13.0 -1.5
(B6.5XFAD x BXD89)F1-Ntg m 17.0 7.0711   2   5.0 0.4159 12.0, 22.0 -1.01
(B6.5XFAD x D2)F1-ADtg f 27.636 11.457   11 3.4543 0.4145 13.0, 43.0 0.07
(B6.5XFAD x D2)F1-ADtg m 33.75 3.7749   4 1.8875 0.1118 29.0, 38.0 1.02
(B6.5XFAD x D2)F1-Ntg f 26.7 15.614   10 4.9375 0.5848 5.0, 47.0 -0.04
(B6.5XFAD x D2)F1-Ntg m 24.5 2.1213   2   1.5 0.0866 23.0, 26.0 -0.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 29.8 5.5162 40.6798 18.9202
(B6.5XFAD x B6)F1-ADtg m 35.3846 3.421 42.132 28.6372
(B6.5XFAD x B6)F1-Ntg f 27.0 8.7219 44.2025 9.7975
(B6.5XFAD x B6)F1-Ntg m 28.8889 4.1116 36.9982 20.7795
(B6.5XFAD x BXD100)F1-ADtg f 24.5 8.7219 41.7025 7.2975
(B6.5XFAD x BXD100)F1-ADtg m 23.4286 4.6621 32.6237 14.2334
(B6.5XFAD x BXD100)F1-Ntg f 16.0 6.1673 28.164 3.836
(B6.5XFAD x BXD100)F1-Ntg m 13.1667 5.0356 23.0985 3.2348
(B6.5XFAD x BXD32)F1-ADtg f 43.0 7.1214 57.0458 28.9542
(B6.5XFAD x BXD32)F1-ADtg m 30.3333 7.1214 44.3791 16.2875
(B6.5XFAD x BXD32)F1-Ntg f 38.0 7.1214 52.0458 23.9542
(B6.5XFAD x BXD32)F1-Ntg m 29.0 8.7219 46.2025 11.7975
(B6.5XFAD x BXD44)F1-ADtg f 25.0 3.5607 32.0229 17.9771
(B6.5XFAD x BXD44)F1-ADtg m 25.625 4.361 34.2263 17.0237
(B6.5XFAD x BXD60)F1-ADtg f 27.75 6.1673 39.914 15.586
(B6.5XFAD x BXD60)F1-ADtg m 26.2 5.5162 37.0798 15.3202
(B6.5XFAD x BXD61)F1-ADtg f 18.2857 4.6621 27.4808 9.0906
(B6.5XFAD x BXD61)F1-ADtg m 35.3333 7.1214 49.3791 21.2875
(B6.5XFAD x BXD61)F1-Ntg f 20.0 5.5162 30.8798 9.1202
(B6.5XFAD x BXD61)F1-Ntg m 29.0 5.0356 38.9319 19.0681
(B6.5XFAD x BXD62)F1-ADtg f 38.0 7.1214 52.0458 23.9542
(B6.5XFAD x BXD62)F1-ADtg m 46.0 8.7219 63.2025 28.7975
(B6.5XFAD x BXD62)F1-Ntg f 12.6667 7.1214 26.7125 -1.3791
(B6.5XFAD x BXD62)F1-Ntg m 28.0 7.1214 42.0458 13.9542
(B6.5XFAD x BXD65)F1-Ntg f 34.75 4.361 43.3513 26.1487
(B6.5XFAD x BXD65)F1-Ntg m 27.5 8.7219 44.7025 10.2975
(B6.5XFAD x BXD68)F1-ADtg f 20.6667 7.1214 34.7125 6.6209
(B6.5XFAD x BXD68)F1-ADtg m 26.1429 4.6621 35.338 16.9477
(B6.5XFAD x BXD68)F1-Ntg f 26.8889 4.1116 34.9982 18.7795
(B6.5XFAD x BXD68)F1-Ntg m 30.0 8.7219 47.2025 12.7975
(B6.5XFAD x BXD69)F1-ADtg f 39.25 6.1673 51.414 27.086
(B6.5XFAD x BXD69)F1-ADtg m 27.0 8.7219 44.2025 9.7975
(B6.5XFAD x BXD69)F1-Ntg f 19.25 6.1673 31.414 7.086
(B6.5XFAD x BXD69)F1-Ntg m 35.5 8.7219 52.7025 18.2975
(B6.5XFAD x BXD70)F1-Ntg f 27.6667 7.1214 41.7125 13.6209
(B6.5XFAD x BXD70)F1-Ntg m 26.0 8.7219 43.2025 8.7975
(B6.5XFAD x BXD75)F1-ADtg f 23.75 6.1673 35.914 11.586
(B6.5XFAD x BXD75)F1-ADtg m 18.75 6.1673 30.914 6.586
(B6.5XFAD x BXD77)F1-ADtg f 32.0 5.5162 42.8798 21.1202
(B6.5XFAD x BXD77)F1-ADtg m 15.0 7.1214 29.0458 0.9542
(B6.5XFAD x BXD77)F1-Ntg f 25.4 3.9006 33.0932 17.7068
(B6.5XFAD x BXD77)F1-Ntg m 28.3333 5.0356 38.2652 18.4015
(B6.5XFAD x BXD87)F1-ADtg f 20.3 3.9006 27.9932 12.6068
(B6.5XFAD x BXD87)F1-ADtg m 22.75 6.1673 34.914 10.586
(B6.5XFAD x D2)F1-ADtg f 27.6364 3.719 34.9715 20.3012
(B6.5XFAD x D2)F1-ADtg m 33.75 6.1673 45.914 21.586
(B6.5XFAD x D2)F1-Ntg f 26.7 3.9006 34.3932 19.0068
(B6.5XFAD x D2)F1-Ntg m 24.5 8.7219 41.7025 7.2975


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 32.5923 3.2455 38.9934 26.1912
(B6.5XFAD x B6)F1-Ntg both 27.9444 4.8212 37.4535 18.4354
(B6.5XFAD x BXD100)F1-ADtg both 23.9643 4.9449 33.7172 14.2114
(B6.5XFAD x BXD100)F1-Ntg both 14.5833 3.981 22.4352 6.7315
(B6.5XFAD x BXD32)F1-ADtg both 36.6667 5.0356 46.5985 26.7348
(B6.5XFAD x BXD32)F1-Ntg both 33.5 5.63 44.6042 22.3958
(B6.5XFAD x BXD44)F1-ADtg both 25.3125 2.815 30.8646 19.7604
(B6.5XFAD x BXD60)F1-ADtg both 26.975 4.1372 35.1349 18.8151
(B6.5XFAD x BXD61)F1-ADtg both 26.8095 4.2559 35.2035 18.4156
(B6.5XFAD x BXD61)F1-Ntg both 24.5 3.7345 31.8657 17.1343
(B6.5XFAD x BXD62)F1-ADtg both 42.0 5.63 53.1042 30.8958
(B6.5XFAD x BXD62)F1-Ntg both 20.3333 5.0356 30.2652 10.4015
(B6.5XFAD x BXD65)F1-Ntg both 31.125 4.8757 40.7415 21.5085
(B6.5XFAD x BXD68)F1-ADtg both 23.4048 4.2559 31.7987 15.0108
(B6.5XFAD x BXD68)F1-Ntg both 28.4444 4.8212 37.9535 18.9354
(B6.5XFAD x BXD69)F1-ADtg both 33.125 5.3411 43.6593 22.5907
(B6.5XFAD x BXD69)F1-Ntg both 27.375 5.3411 37.9093 16.8407
(B6.5XFAD x BXD70)F1-Ntg both 26.8333 5.63 37.9375 15.7292
(B6.5XFAD x BXD75)F1-ADtg both 21.25 4.361 29.8513 12.6487
(B6.5XFAD x BXD77)F1-ADtg both 23.5 4.504 32.3833 14.6167
(B6.5XFAD x BXD77)F1-Ntg both 26.8667 3.1848 33.1481 20.5852
(B6.5XFAD x BXD87)F1-ADtg both 21.525 3.6486 28.7213 14.3287
(B6.5XFAD x D2)F1-ADtg both 30.6932 3.6009 37.7954 23.5909
(B6.5XFAD x D2)F1-Ntg both 25.6 4.7772 35.0222 16.1778




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA