Phenotype measure:   Neuner1   Ymaze_returns_6mo

ID, description, units MPD:65940   Ymaze_returns_6mo   percentage of alternating arm returns in Y-maze   [%]  6 mo
Data set, strains Neuner1   F1 AD-BXD   55 strains     sex: both     age: 8-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Neuner1 - percentage of alternating arm returns in Y-maze 6 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains33 strains
Mean of the strain means27.642   % 26.405   %
Median of the strain means27.636   % 25.75   %
SD of the strain means± 6.5924 ± 6.0446
Coefficient of variation (CV)0.2385 0.2289
Min–max range of strain means16.0   –   55.0   % 12.5   –   39.0   %
Mean sample size per strain6.9   mice 5.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3.8844 3.8844 0.0243 0.8761
strain 29 6939.5874 239.2961 1.4989 0.0502
sex:strain 29 2452.1931 84.5584 0.5297 0.9797
Residuals 352 56194.3254 159.643


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 23.0 5.3666   6 2.1909 0.2333 17.0, 32.0 -0.7
(B6.5XFAD x B6)F1-ADtg m 32.077 13.345   13 3.7011 0.416 13.0, 61.0 0.94
(B6.5XFAD x B6)F1-Ntg f 33.917 7.6807   12 2.2172 0.2265 22.0, 43.0 0.95
(B6.5XFAD x B6)F1-Ntg m 31.2 9.9867   10 3.1581 0.3201 20.0, 50.0 0.79
(B6.5XFAD x BXD100)F1-ADtg f 20.167 19.364   6 7.9053 0.9602 -1.13
(B6.5XFAD x BXD100)F1-ADtg m 22.75 13.036   8 4.6088 0.573 -0.6
(B6.5XFAD x BXD100)F1-Ntg f 23.333 5.2026   6 2.1239 0.223 20.0, 31.0 -0.65
(B6.5XFAD x BXD100)F1-Ntg m 25.0 11.225   5 5.02 0.449 11.0, 37.0 -0.23
(B6.5XFAD x BXD14)F1-ADtg f 25.778 19.923   9 6.6412 0.7729 -0.28
(B6.5XFAD x BXD14)F1-Ntg f 34.5 8.6603   4 4.3301 0.251 26.0, 45.0 1.04
(B6.5XFAD x BXD16)F1-ADtg f 30.375 4.9552   8 1.7519 0.1631 21.0, 37.0 0.41
(B6.5XFAD x BXD22)F1-ADtg f 33.75 13.074   4 6.5368 0.3874 21.0, 52.0 0.93
(B6.5XFAD x BXD22)F1-Ntg f 27.75 7.2744   4 3.6372 0.2621 21.0, 38.0 0.02
(B6.5XFAD x BXD2)F1-ADtg f 22.25 8.9722   8 3.1721 0.4032 11.0, 34.0 -0.82
(B6.5XFAD x BXD2)F1-Ntg f 27.571 15.988   7 6.0429 0.5799 12.0, 58.0 -0.01
(B6.5XFAD x BXD32)F1-ADtg f 24.375 13.244   8 4.6826 0.5434 8.0, 44.0 -0.5
(B6.5XFAD x BXD32)F1-ADtg m 28.0 7.6942   6 3.1411 0.2748 15.0, 35.0 0.26
(B6.5XFAD x BXD32)F1-Ntg f 25.0 3.559   4 1.7795 0.1424 20.0, 28.0 -0.4
(B6.5XFAD x BXD32)F1-Ntg m 24.5 13.229   4 6.6144 0.5399 14.0, 43.0 -0.32
(B6.5XFAD x BXD34)F1-ADtg f 25.667 14.465   9 4.8218 0.5636 7.0, 50.0 -0.3
(B6.5XFAD x BXD34)F1-Ntg f 21.8 16.144   10 5.1051 0.7405 -0.89
(B6.5XFAD x BXD42)F1-ADtg f 24.111 11.784   9 3.928 0.4887 6.0, 38.0 -0.54
(B6.5XFAD x BXD42)F1-Ntg f 22.0 13.802   5 6.1725 0.6274 4.0, 40.0 -0.86
(B6.5XFAD x BXD44)F1-ADtg f 25.0 9.4136   14 2.5159 0.3765 10.0, 40.0 -0.4
(B6.5XFAD x BXD44)F1-ADtg m 20.2 9.0529   10 2.8628 0.4482 10.0, 38.0 -1.03
(B6.5XFAD x BXD44)F1-Ntg f 28.5 13.435   2   9.5 0.4714 19.0, 38.0 0.13
(B6.5XFAD x BXD44)F1-Ntg m 33.25 22.721   4 11.361 0.6833 5.0, 59.0 1.13
(B6.5XFAD x BXD51)F1-ADtg f 28.333 9.5786   9 3.1929 0.3381 16.0, 46.0 0.1
(B6.5XFAD x BXD51)F1-Ntg f 29.857 11.276   7 4.2618 0.3777 18.0, 50.0 0.34
(B6.5XFAD x BXD55)F1-ADtg f 27.7 8.5381   10 2.7 0.3082 18.0, 47.0 0.01
(B6.5XFAD x BXD55)F1-Ntg f 31.5 9.9549   6 4.0641 0.316 18.0, 45.0 0.59
(B6.5XFAD x BXD56)F1-ADtg f 16.0 12.728   2   9.0 0.7955 7.0, 25.0 -1.77
(B6.5XFAD x BXD56)F1-ADtg m 23.0 6.5574   3 3.7859 0.2851 17.0, 30.0 -0.56
(B6.5XFAD x BXD56)F1-Ntg f 24.8 18.102   5 8.0957 0.7299 -0.43
(B6.5XFAD x BXD56)F1-Ntg m 37.0 0.0   1   0.0 0.0 37.0, 37.0 1.75
(B6.5XFAD x BXD60)F1-ADtg f 26.2 9.094   5 4.0669 0.3471 16.0, 36.0 -0.22
(B6.5XFAD x BXD60)F1-ADtg m 25.4 18.69   5 8.3582 0.7358 -0.17
(B6.5XFAD x BXD60)F1-Ntg f 23.5 10.878   4 5.4391 0.4629 12.0, 38.0 -0.63
(B6.5XFAD x BXD61)F1-ADtg f 21.333 17.154   9 5.7179 0.8041 -0.96
(B6.5XFAD x BXD61)F1-ADtg m 19.25 14.127   4 7.0637 0.7339 -1.18
(B6.5XFAD x BXD61)F1-Ntg f 32.5 16.861   6 6.8836 0.5188 13.0, 62.0 0.74
(B6.5XFAD x BXD61)F1-Ntg m 31.25 16.456   8 5.8179 0.5266 7.0, 62.0 0.8
(B6.5XFAD x BXD62)F1-ADtg f 18.0 0.0   1   0.0 0.0 18.0, 18.0 -1.46
(B6.5XFAD x BXD62)F1-ADtg m 12.5 17.678   2   12.5 1.4142 -2.3
(B6.5XFAD x BXD62)F1-Ntg f 21.0 8.544   3 4.9329 0.4069 13.0, 30.0 -1.01
(B6.5XFAD x BXD62)F1-Ntg m 15.0 13.229   3 7.6376 0.8819 -1.89
(B6.5XFAD x BXD65)F1-ADtg f 28.2 9.3785   10 2.9657 0.3326 11.0, 44.0 0.08
(B6.5XFAD x BXD65)F1-ADtg m 26.75 7.6757   4 3.8379 0.2869 17.0, 35.0 0.06
(B6.5XFAD x BXD65)F1-Ntg f 30.222 10.462   9 3.4872 0.3462 22.0, 54.0 0.39
(B6.5XFAD x BXD65)F1-Ntg m 31.167 12.828   6 5.2372 0.4116 12.0, 46.0 0.79
(B6.5XFAD x BXD66)F1-ADtg f 26.0 2.9439   4 1.472 0.1132 22.0, 29.0 -0.25
(B6.5XFAD x BXD66)F1-ADtg m 35.889 21.826   9 7.2752 0.6081 14.0, 83.0 1.57
(B6.5XFAD x BXD66)F1-Ntg f 16.0 22.627   2   16.0 1.4142 -1.77
(B6.5XFAD x BXD66)F1-Ntg m 19.6 14.046   5 6.2817 0.7167 5.0, 42.0 -1.13
(B6.5XFAD x BXD68)F1-ADtg f 25.556 6.4636   9 2.1545 0.2529 13.0, 35.0 -0.32
(B6.5XFAD x BXD68)F1-ADtg m 23.375 9.3188   8 3.2947 0.3987 8.0, 33.0 -0.5
(B6.5XFAD x BXD68)F1-Ntg f 24.053 8.7716   19 2.0124 0.3647 13.0, 43.0 -0.54
(B6.5XFAD x BXD68)F1-Ntg m 26.5 15.801   4 7.9004 0.5963 6.0, 44.0 0.02
(B6.5XFAD x BXD69)F1-ADtg f 29.0 8.5245   4 4.2622 0.2939 17.0, 36.0 0.21
(B6.5XFAD x BXD69)F1-ADtg m 30.0 15.633   6 6.3823 0.5211 8.0, 46.0 0.59
(B6.5XFAD x BXD69)F1-Ntg f 29.5 11.958   4 5.9791 0.4054 12.0, 39.0 0.28
(B6.5XFAD x BXD69)F1-Ntg m 25.0 10.807   6 4.4121 0.4323 16.0, 46.0 -0.23
(B6.5XFAD x BXD70)F1-ADtg f 55.0 0.0   1   0.0 0.0 55.0, 55.0 4.15
(B6.5XFAD x BXD70)F1-Ntg f 24.0 0.0   1   0.0 0.0 24.0, 24.0 -0.55
(B6.5XFAD x BXD75)F1-ADtg f 31.75 13.435   8 4.75 0.4232 14.0, 53.0 0.62
(B6.5XFAD x BXD75)F1-ADtg m 20.667 8.2624   6 3.3731 0.3998 13.0, 31.0 -0.95
(B6.5XFAD x BXD75)F1-Ntg f 27.111 8.6233   9 2.8744 0.3181 14.0, 40.0 -0.08
(B6.5XFAD x BXD75)F1-Ntg m 30.5 16.263   2   11.5 0.5332 19.0, 42.0 0.68
(B6.5XFAD x BXD77)F1-ADtg f 29.333 17.084   6 6.9746 0.5824 8.0, 56.0 0.26
(B6.5XFAD x BXD77)F1-ADtg m 25.75 10.21   4 5.1051 0.3965 14.0, 38.0 -0.11
(B6.5XFAD x BXD77)F1-Ntg f 36.333 10.603   12 3.0608 0.2918 13.0, 50.0 1.32
(B6.5XFAD x BXD77)F1-Ntg m 24.375 12.961   8 4.5823 0.5317 -0.34
(B6.5XFAD x BXD81)F1-ADtg f 33.417 8.0955   12 2.337 0.2423 18.0, 43.0 0.88
(B6.5XFAD x BXD81)F1-Ntg f 30.25 5.5227   8 1.9526 0.1826 21.0, 39.0 0.4
(B6.5XFAD x BXD87)F1-ADtg f 19.0 14.759   12 4.2605 0.7768 -1.31
(B6.5XFAD x BXD87)F1-ADtg m 21.8 16.27   5 7.276 0.7463 5.0, 46.0 -0.76
(B6.5XFAD x BXD87)F1-Ntg f 29.333 10.764   6 4.3944 0.367 14.0, 44.0 0.26
(B6.5XFAD x BXD87)F1-Ntg m 22.75 7.8049   4 3.9025 0.3431 13.0, 32.0 -0.6
(B6.5XFAD x BXD89)F1-ADtg m 39.0 0.0   1   0.0 0.0 39.0, 39.0 2.08
(B6.5XFAD x BXD89)F1-Ntg f 31.0 16.971   2   12.0 0.5474 19.0, 43.0 0.51
(B6.5XFAD x BXD89)F1-Ntg m 26.5 2.1213   2   1.5 0.08 25.0, 28.0 0.02
(B6.5XFAD x BXD99)F1-ADtg f 30.75 8.1394   4 4.0697 0.2647 21.0, 40.0 0.47
(B6.5XFAD x BXD99)F1-Ntg f 47.0 0.0   1   0.0 0.0 47.0, 47.0 2.94
(B6.5XFAD x D2)F1-ADtg f 29.267 10.879   15 2.8089 0.3717 0.25
(B6.5XFAD x D2)F1-ADtg m 27.769 10.948   13 3.0364 0.3942 7.0, 46.0 0.23
(B6.5XFAD x D2)F1-Ntg f 31.0 18.115   13 5.0243 0.5844 8.0, 63.0 0.51
(B6.5XFAD x D2)F1-Ntg m 33.6 17.29   10 5.4675 0.5146 9.0, 58.0 1.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 23.0 5.1582 33.1448 12.8552
(B6.5XFAD x B6)F1-ADtg m 32.0769 3.5043 38.969 25.1849
(B6.5XFAD x B6)F1-Ntg f 33.9167 3.6474 41.0901 26.7432
(B6.5XFAD x B6)F1-Ntg m 31.2 3.9955 39.0581 23.3419
(B6.5XFAD x BXD100)F1-ADtg f 20.1667 5.1582 30.3115 10.0219
(B6.5XFAD x BXD100)F1-ADtg m 22.75 4.4671 31.5356 13.9644
(B6.5XFAD x BXD100)F1-Ntg f 23.3333 5.1582 33.4781 13.1885
(B6.5XFAD x BXD100)F1-Ntg m 25.0 5.6505 36.1131 13.8869
(B6.5XFAD x BXD32)F1-ADtg f 24.375 4.4671 33.1606 15.5894
(B6.5XFAD x BXD32)F1-ADtg m 28.0 5.1582 38.1448 17.8552
(B6.5XFAD x BXD32)F1-Ntg f 25.0 6.3175 37.4248 12.5752
(B6.5XFAD x BXD32)F1-Ntg m 24.5 6.3175 36.9248 12.0752
(B6.5XFAD x BXD44)F1-ADtg f 25.0 3.3768 31.6413 18.3587
(B6.5XFAD x BXD44)F1-ADtg m 20.2 3.9955 28.0581 12.3419
(B6.5XFAD x BXD44)F1-Ntg f 28.5 8.9343 46.0713 10.9287
(B6.5XFAD x BXD44)F1-Ntg m 33.25 6.3175 45.6748 20.8252
(B6.5XFAD x BXD56)F1-ADtg f 16.0 8.9343 33.5713 -1.5713
(B6.5XFAD x BXD56)F1-ADtg m 23.0 7.2948 37.3469 8.6531
(B6.5XFAD x BXD60)F1-ADtg f 26.2 5.6505 37.3131 15.0869
(B6.5XFAD x BXD60)F1-ADtg m 25.4 5.6505 36.5131 14.2869
(B6.5XFAD x BXD61)F1-ADtg f 21.3333 4.2117 29.6165 13.0501
(B6.5XFAD x BXD61)F1-ADtg m 19.25 6.3175 31.6748 6.8252
(B6.5XFAD x BXD61)F1-Ntg f 32.5 5.1582 42.6448 22.3552
(B6.5XFAD x BXD61)F1-Ntg m 31.25 4.4671 40.0356 22.4644
(B6.5XFAD x BXD62)F1-Ntg f 21.0 7.2948 35.3469 6.6531
(B6.5XFAD x BXD62)F1-Ntg m 15.0 7.2948 29.3469 0.6531
(B6.5XFAD x BXD65)F1-ADtg f 28.2 3.9955 36.0581 20.3419
(B6.5XFAD x BXD65)F1-ADtg m 26.75 6.3175 39.1748 14.3252
(B6.5XFAD x BXD65)F1-Ntg f 30.2222 4.2117 38.5054 21.939
(B6.5XFAD x BXD65)F1-Ntg m 31.1667 5.1582 41.3115 21.0219
(B6.5XFAD x BXD66)F1-ADtg f 26.0 6.3175 38.4248 13.5752
(B6.5XFAD x BXD66)F1-ADtg m 35.8889 4.2117 44.1721 27.6057
(B6.5XFAD x BXD66)F1-Ntg f 16.0 8.9343 33.5713 -1.5713
(B6.5XFAD x BXD66)F1-Ntg m 19.6 5.6505 30.7131 8.4869
(B6.5XFAD x BXD68)F1-ADtg f 25.5556 4.2117 33.8387 17.2724
(B6.5XFAD x BXD68)F1-ADtg m 23.375 4.4671 32.1606 14.5894
(B6.5XFAD x BXD68)F1-Ntg f 24.0526 2.8987 29.7535 18.3518
(B6.5XFAD x BXD68)F1-Ntg m 26.5 6.3175 38.9248 14.0752
(B6.5XFAD x BXD69)F1-ADtg f 29.0 6.3175 41.4248 16.5752
(B6.5XFAD x BXD69)F1-ADtg m 30.0 5.1582 40.1448 19.8552
(B6.5XFAD x BXD69)F1-Ntg f 29.5 6.3175 41.9248 17.0752
(B6.5XFAD x BXD69)F1-Ntg m 25.0 5.1582 35.1448 14.8552
(B6.5XFAD x BXD75)F1-ADtg f 31.75 4.4671 40.5356 22.9644
(B6.5XFAD x BXD75)F1-ADtg m 20.6667 5.1582 30.8115 10.5219
(B6.5XFAD x BXD75)F1-Ntg f 27.1111 4.2117 35.3943 18.8279
(B6.5XFAD x BXD75)F1-Ntg m 30.5 8.9343 48.0713 12.9287
(B6.5XFAD x BXD77)F1-ADtg f 29.3333 5.1582 39.4781 19.1885
(B6.5XFAD x BXD77)F1-ADtg m 25.75 6.3175 38.1748 13.3252
(B6.5XFAD x BXD77)F1-Ntg f 36.3333 3.6474 43.5068 29.1599
(B6.5XFAD x BXD77)F1-Ntg m 24.375 4.4671 33.1606 15.5894
(B6.5XFAD x BXD87)F1-ADtg f 19.0 3.6474 26.1735 11.8265
(B6.5XFAD x BXD87)F1-ADtg m 21.8 5.6505 32.9131 10.6869
(B6.5XFAD x BXD87)F1-Ntg f 29.3333 5.1582 39.4781 19.1885
(B6.5XFAD x BXD87)F1-Ntg m 22.75 6.3175 35.1748 10.3252
(B6.5XFAD x BXD89)F1-Ntg f 31.0 8.9343 48.5713 13.4287
(B6.5XFAD x BXD89)F1-Ntg m 26.5 8.9343 44.0713 8.9287
(B6.5XFAD x D2)F1-ADtg f 29.2667 3.2623 35.6828 22.8505
(B6.5XFAD x D2)F1-ADtg m 27.7692 3.5043 34.6613 20.8772
(B6.5XFAD x D2)F1-Ntg f 31.0 3.5043 37.892 24.108
(B6.5XFAD x D2)F1-Ntg m 33.6 3.9955 41.4581 25.7419


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 27.5385 3.118 33.6707 21.4062
(B6.5XFAD x B6)F1-Ntg both 32.5583 2.705 37.8783 27.2384
(B6.5XFAD x BXD100)F1-ADtg both 21.4583 3.4118 28.1685 14.7482
(B6.5XFAD x BXD100)F1-Ntg both 24.1667 3.8254 31.6902 16.6431
(B6.5XFAD x BXD32)F1-ADtg both 26.1875 3.4118 32.8976 19.4774
(B6.5XFAD x BXD32)F1-Ntg both 24.75 4.4671 33.5356 15.9644
(B6.5XFAD x BXD44)F1-ADtg both 22.6 2.6157 27.7443 17.4557
(B6.5XFAD x BXD44)F1-Ntg both 30.875 5.4711 41.6352 20.1148
(B6.5XFAD x BXD56)F1-ADtg both 19.5 5.7671 30.8422 8.1578
(B6.5XFAD x BXD60)F1-ADtg both 25.8 3.9955 33.6581 17.9419
(B6.5XFAD x BXD61)F1-ADtg both 20.2917 3.7963 27.758 12.8253
(B6.5XFAD x BXD61)F1-Ntg both 31.875 3.4118 38.5851 25.1649
(B6.5XFAD x BXD62)F1-Ntg both 18.0 5.1582 28.1448 7.8552
(B6.5XFAD x BXD65)F1-ADtg both 27.475 3.7375 34.8256 20.1244
(B6.5XFAD x BXD65)F1-Ntg both 30.6944 3.3296 37.2429 24.146
(B6.5XFAD x BXD66)F1-ADtg both 30.9444 3.7963 38.4108 23.4781
(B6.5XFAD x BXD66)F1-Ntg both 17.8 5.2856 28.1953 7.4047
(B6.5XFAD x BXD68)F1-ADtg both 24.4653 3.0698 30.5026 18.4279
(B6.5XFAD x BXD68)F1-Ntg both 25.2763 3.4754 32.1114 18.4412
(B6.5XFAD x BXD69)F1-ADtg both 29.5 4.0779 37.5202 21.4798
(B6.5XFAD x BXD69)F1-Ntg both 27.25 4.0779 35.2702 19.2298
(B6.5XFAD x BXD75)F1-ADtg both 26.2083 3.4118 32.9185 19.4982
(B6.5XFAD x BXD75)F1-Ntg both 28.8056 4.9386 38.5185 19.0927
(B6.5XFAD x BXD77)F1-ADtg both 27.5417 4.0779 35.5618 19.5215
(B6.5XFAD x BXD77)F1-Ntg both 30.3542 2.8835 36.0253 24.6831
(B6.5XFAD x BXD87)F1-ADtg both 20.4 3.3627 27.0136 13.7864
(B6.5XFAD x BXD87)F1-Ntg both 26.0417 4.0779 34.0618 18.0215
(B6.5XFAD x BXD89)F1-Ntg both 28.75 6.3175 41.1748 16.3252
(B6.5XFAD x D2)F1-ADtg both 28.5179 2.3939 33.2261 23.8098
(B6.5XFAD x D2)F1-Ntg both 32.3 2.6573 37.5261 27.0739




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA