Phenotype measure:   Neuner1   Ymaze_returns_4mo

ID, description, units MPD:65939   Ymaze_returns_4mo   percentage of alternating arm returns in Y-maze   [%]  4 mo
Data set, strains Neuner1   F1 AD-BXD   53 strains     sex: both     age: 8-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage of alternating arm returns in Y-maze 4 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested52 strains31 strains
Mean of the strain means28.502   % 27.698   %
Median of the strain means28.525   % 28.429   %
SD of the strain means± 5.4392 ± 7.4379
Coefficient of variation (CV)0.1908 0.2685
Min–max range of strain means18.75   –   43.5   % 11.0   –   39.167   %
Mean sample size per strain6.3   mice 4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1223 0.1223 0.0009 0.9755
strain 28 6154.3521 219.7983 1.6951 0.0183
sex:strain 28 4460.6032 159.3073 1.2286 0.2038
Residuals 273 35399.6656 129.6691


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 31.6 7.3007   5 3.265 0.231 24.0, 40.0 0.57
(B6.5XFAD x B6)F1-ADtg m 25.286 15.052   7 5.6892 0.5953 -0.32
(B6.5XFAD x B6)F1-Ntg f 30.4 10.824   10 3.4228 0.356 16.0, 53.0 0.35
(B6.5XFAD x B6)F1-Ntg m 39.167 11.618   6 4.7428 0.2966 25.0, 58.0 1.54
(B6.5XFAD x BXD100)F1-ADtg f 27.833 4.9565   6 2.0235 0.1781 18.0, 31.0 -0.12
(B6.5XFAD x BXD100)F1-ADtg m 19.556 8.0173   9 2.6724 0.41 7.0, 29.0 -1.09
(B6.5XFAD x BXD100)F1-Ntg f 19.667 13.895   6 5.6725 0.7065 -1.62
(B6.5XFAD x BXD100)F1-Ntg m 25.667 23.653   6 9.6563 0.9215 5.0, 67.0 -0.27
(B6.5XFAD x BXD14)F1-ADtg f 34.0 9.8995   9 3.2998 0.2912 25.0, 51.0 1.01
(B6.5XFAD x BXD14)F1-Ntg f 32.0 9.0185   4 4.5092 0.2818 19.0, 39.0 0.64
(B6.5XFAD x BXD16)F1-ADtg f 26.5 11.662   8 4.1231 0.4401 8.0, 42.0 -0.37
(B6.5XFAD x BXD22)F1-ADtg f 24.0 8.4853   2   6.0 0.3536 18.0, 30.0 -0.83
(B6.5XFAD x BXD22)F1-Ntg f 28.25 11.786   4 5.8931 0.4172 17.0, 44.0 -0.05
(B6.5XFAD x BXD2)F1-ADtg f 19.625 11.538   8 4.0793 0.5879 -1.63
(B6.5XFAD x BXD2)F1-Ntg f 22.667 11.147   6 4.5509 0.4918 9.0, 33.0 -1.07
(B6.5XFAD x BXD32)F1-ADtg f 29.875 16.296   8 5.7614 0.5455 15.0, 60.0 0.25
(B6.5XFAD x BXD32)F1-ADtg m 23.833 5.7417   6 2.344 0.2409 16.0, 28.0 -0.52
(B6.5XFAD x BXD32)F1-Ntg f 26.5 8.1854   4 4.0927 0.3089 16.0, 33.0 -0.37
(B6.5XFAD x BXD32)F1-Ntg m 32.5 13.699   4 6.8496 0.4215 16.0, 48.0 0.65
(B6.5XFAD x BXD34)F1-ADtg f 25.6 13.435   10 4.2484 0.5248 7.0, 50.0 -0.53
(B6.5XFAD x BXD34)F1-Ntg f 25.083 12.817   12 3.6998 0.511 6.0, 50.0 -0.63
(B6.5XFAD x BXD42)F1-ADtg f 26.375 8.6013   8 3.041 0.3261 14.0, 44.0 -0.39
(B6.5XFAD x BXD42)F1-Ntg f 31.2 10.686   5 4.7791 0.3425 19.0, 45.0 0.5
(B6.5XFAD x BXD44)F1-ADtg f 27.636 12.62   11 3.805 0.4566 8.0, 50.0 -0.16
(B6.5XFAD x BXD44)F1-ADtg m 31.333 6.4083   6 2.6162 0.2045 24.0, 40.0 0.49
(B6.5XFAD x BXD44)F1-Ntg f 27.0 8.4853   2   6.0 0.3143 21.0, 33.0 -0.28
(B6.5XFAD x BXD44)F1-Ntg m 18.0 11.314   2   8.0 0.6285 10.0, 26.0 -1.3
(B6.5XFAD x BXD51)F1-ADtg f 18.75 5.6252   8 1.9888 0.3 10.0, 27.0 -1.79
(B6.5XFAD x BXD51)F1-Ntg f 20.0 5.7155   7 2.1602 0.2858 9.0, 27.0 -1.56
(B6.5XFAD x BXD55)F1-ADtg f 28.8 10.912   10 3.4506 0.3789 10.0, 47.0 0.05
(B6.5XFAD x BXD55)F1-Ntg f 30.5 8.5965   6 3.5095 0.2819 18.0, 41.0 0.37
(B6.5XFAD x BXD56)F1-ADtg f 32.5 12.021   2   8.5 0.3699 24.0, 41.0 0.74
(B6.5XFAD x BXD56)F1-Ntg f 21.667 12.503   3 7.2188 0.5771 13.0, 36.0 -1.26
(B6.5XFAD x BXD60)F1-ADtg f 32.4 6.1074   5 2.7313 0.1885 28.0, 43.0 0.72
(B6.5XFAD x BXD60)F1-ADtg m 28.429 12.921   7 4.8837 0.4545 14.0, 44.0 0.1
(B6.5XFAD x BXD60)F1-Ntg f 29.8 10.964   5 4.9031 0.3679 18.0, 42.0 0.24
(B6.5XFAD x BXD61)F1-ADtg f 33.833 11.635   6 4.7499 0.3439 14.0, 48.0 0.98
(B6.5XFAD x BXD61)F1-ADtg m 17.5 6.6583   4 3.3292 0.3805 12.0, 27.0 -1.37
(B6.5XFAD x BXD61)F1-Ntg f 23.0 13.528   3 7.8102 0.5882 9.0, 36.0 -1.01
(B6.5XFAD x BXD61)F1-Ntg m 37.5 9.3274   4 4.6637 0.2487 29.0, 50.0 1.32
(B6.5XFAD x BXD62)F1-ADtg f 38.0 0.0   1   0.0 0.0 38.0, 38.0 1.75
(B6.5XFAD x BXD62)F1-ADtg m 16.333 14.154   3 8.1718 0.8666 -1.53
(B6.5XFAD x BXD62)F1-Ntg f 31.667 0.57735   3 0.33333 0.0182 31.0, 32.0 0.58
(B6.5XFAD x BXD62)F1-Ntg m 35.5 7.0475   4 3.5237 0.1985 25.0, 40.0 1.05
(B6.5XFAD x BXD65)F1-ADtg f 27.0 8.5245   10 2.6957 0.3157 19.0, 48.0 -0.28
(B6.5XFAD x BXD65)F1-ADtg m 17.25 9.4648   4 4.7324 0.5487 11.0, 31.0 -1.4
(B6.5XFAD x BXD65)F1-Ntg f 30.444 10.187   9 3.3957 0.3346 14.0, 42.0 0.36
(B6.5XFAD x BXD65)F1-Ntg m 32.667 9.9532   6 4.0634 0.3047 14.0, 44.0 0.67
(B6.5XFAD x BXD66)F1-ADtg f 34.25 20.288   4 10.144 0.5923 7.0, 55.0 1.06
(B6.5XFAD x BXD66)F1-ADtg m 30.889 16.097   9 5.3656 0.5211 0.43
(B6.5XFAD x BXD66)F1-Ntg f 43.5 4.9497   2   3.5 0.1138 40.0, 47.0 2.76
(B6.5XFAD x BXD66)F1-Ntg m 28.5 13.528   4 6.7639 0.4747 11.0, 44.0 0.11
(B6.5XFAD x BXD68)F1-ADtg f 23.286 3.5923   7 1.3578 0.1543 19.0, 29.0 -0.96
(B6.5XFAD x BXD68)F1-ADtg m 18.375 8.07   8 2.8532 0.4392 8.0, 27.0 -1.25
(B6.5XFAD x BXD68)F1-Ntg f 21.278 8.5047   18 2.0046 0.3997 9.0, 37.0 -1.33
(B6.5XFAD x BXD68)F1-Ntg m 28.0 11.045   4 5.5227 0.3945 17.0, 38.0 0.04
(B6.5XFAD x BXD69)F1-ADtg f 22.333 7.9917   6 3.2626 0.3578 9.0, 30.0 -1.13
(B6.5XFAD x BXD69)F1-ADtg m 31.8 12.194   5 5.4534 0.3835 19.0, 46.0 0.55
(B6.5XFAD x BXD69)F1-Ntg f 29.333 6.6583   3 3.8442 0.227 25.0, 37.0 0.15
(B6.5XFAD x BXD69)F1-Ntg m 38.0 5.1962   3 3.0 0.1367 35.0, 44.0 1.39
(B6.5XFAD x BXD75)F1-ADtg f 31.8 15.563   5 6.9599 0.4894 8.0, 50.0 0.61
(B6.5XFAD x BXD75)F1-ADtg m 23.0 4.4272   6 1.8074 0.1925 17.0, 28.0 -0.63
(B6.5XFAD x BXD75)F1-Ntg f 24.375 8.9752   8 3.1732 0.3682 13.0, 38.0 -0.76
(B6.5XFAD x BXD75)F1-Ntg m 25.0 11.314   2   8.0 0.4525 17.0, 33.0 -0.36
(B6.5XFAD x BXD77)F1-ADtg f 26.5 19.092   2   13.5 0.7204 13.0, 40.0 -0.37
(B6.5XFAD x BXD77)F1-ADtg m 25.0 21.213   2   15.0 0.8485 10.0, 40.0 -0.36
(B6.5XFAD x BXD77)F1-Ntg f 29.0 15.05   5 6.7305 0.519 4.0, 43.0 0.09
(B6.5XFAD x BXD77)F1-Ntg m 30.25 21.125   4 10.562 0.6983 6.0, 57.0 0.34
(B6.5XFAD x BXD81)F1-ADtg f 30.667 6.9848   12 2.0163 0.2278 17.0, 42.0 0.4
(B6.5XFAD x BXD81)F1-Ntg f 41.625 5.6045   8 1.9815 0.1346 31.0, 48.0 2.41
(B6.5XFAD x BXD87)F1-ADtg f 23.615 11.99   13 3.3254 0.5077 -0.9
(B6.5XFAD x BXD87)F1-ADtg m 11.0 12.309   5 5.5045 1.119 -2.25
(B6.5XFAD x BXD87)F1-Ntg f 24.667 11.69   6 4.7726 0.4739 5.0, 40.0 -0.71
(B6.5XFAD x BXD87)F1-Ntg m 33.0 8.2462   4 4.1231 0.2499 24.0, 44.0 0.71
(B6.5XFAD x BXD89)F1-ADtg m 36.0 0.0   1   0.0 0.0 36.0, 36.0 1.12
(B6.5XFAD x BXD89)F1-Ntg f 38.5 0.70711   2   0.5 0.0184 38.0, 39.0 1.84
(B6.5XFAD x BXD89)F1-Ntg m 38.0 9.8995   2   7.0 0.2605 31.0, 45.0 1.39
(B6.5XFAD x BXD99)F1-ADtg f 34.25 17.914   4 8.9571 0.523 10.0, 53.0 1.06
(B6.5XFAD x BXD99)F1-Ntg f 27.0 0.0   1   0.0 0.0 27.0, 27.0 -0.28
(B6.5XFAD x D2)F1-ADtg f 28.8 11.223   10 3.549 0.3897 16.0, 47.0 0.05
(B6.5XFAD x D2)F1-ADtg m 33.714 14.625   7 5.5279 0.4338 16.0, 60.0 0.81
(B6.5XFAD x D2)F1-Ntg f 33.143 6.6189   7 2.5017 0.1997 25.0, 42.0 0.85
(B6.5XFAD x D2)F1-Ntg m 27.6 3.3615   5 1.5033 0.1218 24.0, 32.0 -0.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 31.6 5.0925 41.6256 21.5744
(B6.5XFAD x B6)F1-ADtg m 25.2857 4.304 33.7589 16.8125
(B6.5XFAD x B6)F1-Ntg f 30.4 3.601 37.4892 23.3108
(B6.5XFAD x B6)F1-Ntg m 39.1667 4.6488 48.3188 30.0146
(B6.5XFAD x BXD100)F1-ADtg f 27.8333 4.6488 36.9854 18.6812
(B6.5XFAD x BXD100)F1-ADtg m 19.5556 3.7957 27.0282 12.0829
(B6.5XFAD x BXD100)F1-Ntg f 19.6667 4.6488 28.8188 10.5146
(B6.5XFAD x BXD100)F1-Ntg m 25.6667 4.6488 34.8188 16.5146
(B6.5XFAD x BXD32)F1-ADtg f 29.875 4.026 37.8009 21.9491
(B6.5XFAD x BXD32)F1-ADtg m 23.8333 4.6488 32.9854 14.6812
(B6.5XFAD x BXD32)F1-Ntg f 26.5 5.6936 37.709 15.291
(B6.5XFAD x BXD32)F1-Ntg m 32.5 5.6936 43.709 21.291
(B6.5XFAD x BXD44)F1-ADtg f 27.6364 3.4334 34.3956 20.8771
(B6.5XFAD x BXD44)F1-ADtg m 31.3333 4.6488 40.4854 22.1812
(B6.5XFAD x BXD44)F1-Ntg f 27.0 8.052 42.8519 11.1481
(B6.5XFAD x BXD44)F1-Ntg m 18.0 8.052 33.8519 2.1481
(B6.5XFAD x BXD60)F1-ADtg f 32.4 5.0925 42.4256 22.3744
(B6.5XFAD x BXD60)F1-ADtg m 28.4286 4.304 36.9018 19.9554
(B6.5XFAD x BXD61)F1-ADtg f 33.8333 4.6488 42.9854 24.6812
(B6.5XFAD x BXD61)F1-ADtg m 17.5 5.6936 28.709 6.291
(B6.5XFAD x BXD61)F1-Ntg f 23.0 6.5744 35.943 10.057
(B6.5XFAD x BXD61)F1-Ntg m 37.5 5.6936 48.709 26.291
(B6.5XFAD x BXD62)F1-Ntg f 31.6667 6.5744 44.6097 18.7237
(B6.5XFAD x BXD62)F1-Ntg m 35.5 5.6936 46.709 24.291
(B6.5XFAD x BXD65)F1-ADtg f 27.0 3.601 34.0892 19.9108
(B6.5XFAD x BXD65)F1-ADtg m 17.25 5.6936 28.459 6.041
(B6.5XFAD x BXD65)F1-Ntg f 30.4444 3.7957 37.9171 22.9718
(B6.5XFAD x BXD65)F1-Ntg m 32.6667 4.6488 41.8188 23.5146
(B6.5XFAD x BXD66)F1-ADtg f 34.25 5.6936 45.459 23.041
(B6.5XFAD x BXD66)F1-ADtg m 30.8889 3.7957 38.3615 23.4162
(B6.5XFAD x BXD66)F1-Ntg f 43.5 8.052 59.3519 27.6481
(B6.5XFAD x BXD66)F1-Ntg m 28.5 5.6936 39.709 17.291
(B6.5XFAD x BXD68)F1-ADtg f 23.2857 4.304 31.7589 14.8125
(B6.5XFAD x BXD68)F1-ADtg m 18.375 4.026 26.3009 10.4491
(B6.5XFAD x BXD68)F1-Ntg f 21.2778 2.684 26.5617 15.9938
(B6.5XFAD x BXD68)F1-Ntg m 28.0 5.6936 39.209 16.791
(B6.5XFAD x BXD69)F1-ADtg f 22.3333 4.6488 31.4854 13.1812
(B6.5XFAD x BXD69)F1-ADtg m 31.8 5.0925 41.8256 21.7744
(B6.5XFAD x BXD69)F1-Ntg f 29.3333 6.5744 42.2763 16.3903
(B6.5XFAD x BXD69)F1-Ntg m 38.0 6.5744 50.943 25.057
(B6.5XFAD x BXD75)F1-ADtg f 31.8 5.0925 41.8256 21.7744
(B6.5XFAD x BXD75)F1-ADtg m 23.0 4.6488 32.1521 13.8479
(B6.5XFAD x BXD75)F1-Ntg f 24.375 4.026 32.3009 16.4491
(B6.5XFAD x BXD75)F1-Ntg m 25.0 8.052 40.8519 9.1481
(B6.5XFAD x BXD77)F1-ADtg f 26.5 8.052 42.3519 10.6481
(B6.5XFAD x BXD77)F1-ADtg m 25.0 8.052 40.8519 9.1481
(B6.5XFAD x BXD77)F1-Ntg f 29.0 5.0925 39.0256 18.9744
(B6.5XFAD x BXD77)F1-Ntg m 30.25 5.6936 41.459 19.041
(B6.5XFAD x BXD87)F1-ADtg f 23.6154 3.1583 29.833 17.3978
(B6.5XFAD x BXD87)F1-ADtg m 11.0 5.0925 21.0256 0.9744
(B6.5XFAD x BXD87)F1-Ntg f 24.6667 4.6488 33.8188 15.5146
(B6.5XFAD x BXD87)F1-Ntg m 33.0 5.6936 44.209 21.791
(B6.5XFAD x BXD89)F1-Ntg f 38.5 8.052 54.3519 22.6481
(B6.5XFAD x BXD89)F1-Ntg m 38.0 8.052 53.8519 22.1481
(B6.5XFAD x D2)F1-ADtg f 28.8 3.601 35.8892 21.7108
(B6.5XFAD x D2)F1-ADtg m 33.7143 4.304 42.1875 25.2411
(B6.5XFAD x D2)F1-Ntg f 33.1429 4.304 41.616 24.6697
(B6.5XFAD x D2)F1-Ntg m 27.6 5.0925 37.6256 17.5744


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 28.4429 3.3338 35.0062 21.8796
(B6.5XFAD x B6)F1-Ntg both 34.7833 2.9402 40.5716 28.995
(B6.5XFAD x BXD100)F1-ADtg both 23.6944 3.0008 29.6021 17.7868
(B6.5XFAD x BXD100)F1-Ntg both 22.6667 3.2872 29.1382 16.1952
(B6.5XFAD x BXD32)F1-ADtg both 26.8542 3.0749 32.9077 20.8006
(B6.5XFAD x BXD32)F1-Ntg both 29.5 4.026 37.4259 21.5741
(B6.5XFAD x BXD44)F1-ADtg both 29.4848 2.8896 35.1736 23.7961
(B6.5XFAD x BXD44)F1-Ntg both 22.5 5.6936 33.709 11.291
(B6.5XFAD x BXD60)F1-ADtg both 30.4143 3.3338 36.9776 23.851
(B6.5XFAD x BXD61)F1-ADtg both 25.6667 3.6752 32.902 18.4313
(B6.5XFAD x BXD61)F1-Ntg both 30.25 4.3486 38.811 21.689
(B6.5XFAD x BXD62)F1-Ntg both 33.5833 4.3486 42.1443 25.0223
(B6.5XFAD x BXD65)F1-ADtg both 22.125 3.3684 28.7563 15.4937
(B6.5XFAD x BXD65)F1-Ntg both 31.5556 3.0008 37.4632 25.6479
(B6.5XFAD x BXD66)F1-ADtg both 32.5694 3.4214 39.3052 25.8337
(B6.5XFAD x BXD66)F1-Ntg both 36.0 4.9308 45.7073 26.2927
(B6.5XFAD x BXD68)F1-ADtg both 20.8304 2.9467 26.6316 15.0292
(B6.5XFAD x BXD68)F1-Ntg both 24.6389 3.1473 30.8349 18.4429
(B6.5XFAD x BXD69)F1-ADtg both 27.0667 3.4477 33.854 20.2793
(B6.5XFAD x BXD69)F1-Ntg both 33.6667 4.6488 42.8188 24.5146
(B6.5XFAD x BXD75)F1-ADtg both 27.4 3.4477 34.1874 20.6126
(B6.5XFAD x BXD75)F1-Ntg both 24.6875 4.5012 33.549 15.826
(B6.5XFAD x BXD77)F1-ADtg both 25.75 5.6936 36.959 14.541
(B6.5XFAD x BXD77)F1-Ntg both 29.625 3.8194 37.1442 22.1058
(B6.5XFAD x BXD87)F1-ADtg both 17.3077 2.9962 23.2062 11.4091
(B6.5XFAD x BXD87)F1-Ntg both 28.8333 3.6752 36.0687 21.598
(B6.5XFAD x BXD89)F1-Ntg both 38.25 5.6936 49.459 27.041
(B6.5XFAD x D2)F1-ADtg both 31.2571 2.8058 36.781 25.7333
(B6.5XFAD x D2)F1-Ntg both 30.3714 3.3338 36.9347 23.8081




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA