Phenotype measure:   Neuner1   Ymaze_returns_2mo

ID, description, units MPD:65938   Ymaze_returns_2mo   percentage of alternating arm returns in Y-maze   [%]  2 mo
Data set, strains Neuner1   F1 AD-BXD   15 strains     sex: both     age: 8-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage of alternating arm returns in Y-maze 2 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains12 strains
Mean of the strain means33.019   % 31.292   %
Median of the strain means33.0   % 33.0   %
SD of the strain means± 7.0832 ± 9.4962
Coefficient of variation (CV)0.2145 0.3035
Min–max range of strain means23.0   –   46.0   % 11.0   –   45.0   %
Mean sample size per strain2.2   mice 2.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1222 0.1222 0.0008 0.9771
strain 4 111.6495 27.9124 0.1926 0.9398
sex:strain 4 843.4783 210.8696 1.4553 0.2481
Residuals 23 3332.75 144.9022


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x BXD100)F1-ADtg f 32.5 12.871   4 6.4356 0.396 19.0, 44.0 -0.07
(B6.5XFAD x BXD100)F1-ADtg m 38.667 9.815   3 5.6667 0.2538 33.0, 50.0 0.78
(B6.5XFAD x BXD100)F1-Ntg f 33.0 4.2426   2   3.0 0.1286 30.0, 36.0 0.0
(B6.5XFAD x BXD44)F1-ADtg f 26.0 0.0   1   0.0 0.0 26.0, 26.0 -0.99
(B6.5XFAD x BXD44)F1-ADtg m 34.0 5.3541   4 2.6771 0.1575 29.0, 40.0 0.29
(B6.5XFAD x BXD44)F1-Ntg m 42.0 0.0   1   0.0 0.0 42.0, 42.0 1.13
(B6.5XFAD x BXD60)F1-ADtg f 23.0 0.0   1   0.0 0.0 23.0, 23.0 -1.41
(B6.5XFAD x BXD60)F1-ADtg m 32.0 0.0   1   0.0 0.0 32.0, 32.0 0.07
(B6.5XFAD x BXD60)F1-Ntg f 39.0 12.728   2   9.0 0.3264 30.0, 48.0 0.84
(B6.5XFAD x BXD62)F1-Ntg f 35.0 0.0   1   0.0 0.0 35.0, 35.0 0.28
(B6.5XFAD x BXD62)F1-Ntg m 11.0 0.0   1   0.0 0.0 11.0, 11.0 -2.14
(B6.5XFAD x BXD66)F1-ADtg f 23.0 8.4853   2   6.0 0.3689 17.0, 29.0 -1.41
(B6.5XFAD x BXD66)F1-ADtg m 37.5 12.021   2   8.5 0.3206 29.0, 46.0 0.65
(B6.5XFAD x BXD66)F1-Ntg f 46.0 0.0   1   0.0 0.0 46.0, 46.0 1.83
(B6.5XFAD x BXD66)F1-Ntg m 26.0 0.0   1   0.0 0.0 26.0, 26.0 -0.56
(B6.5XFAD x BXD68)F1-ADtg f 30.25 15.945   4 7.9726 0.5271 7.0, 42.0 -0.39
(B6.5XFAD x BXD68)F1-ADtg m 34.833 9.6626   6 3.9448 0.2774 24.0, 50.0 0.37
(B6.5XFAD x BXD68)F1-Ntg f 34.5 19.227   4 9.6134 0.5573 7.0, 50.0 0.21
(B6.5XFAD x BXD68)F1-Ntg m 23.0 5.6569   2   4.0 0.246 19.0, 27.0 -0.87
(B6.5XFAD x BXD69)F1-ADtg f 40.0 3.559   4 1.7795 0.089 36.0, 43.0 0.99
(B6.5XFAD x BXD69)F1-ADtg m 24.0 4.2426   2   3.0 0.1768 21.0, 27.0 -0.77
(B6.5XFAD x BXD69)F1-Ntg f 27.0 0.0   1   0.0 0.0 27.0, 27.0 -0.85
(B6.5XFAD x BXD75)F1-ADtg f 40.0 0.0   1   0.0 0.0 40.0, 40.0 0.99
(B6.5XFAD x BXD75)F1-ADtg m 27.5 4.9497   2   3.5 0.18 24.0, 31.0 -0.4
(B6.5XFAD x BXD75)F1-Ntg m 45.0 0.0   1   0.0 0.0 45.0, 45.0 1.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x BXD100)F1-ADtg f 32.5 6.0188 44.9508 20.0492
(B6.5XFAD x BXD100)F1-ADtg m 38.6667 6.9499 53.0436 24.2898
(B6.5XFAD x BXD66)F1-ADtg f 23.0 8.5118 40.608 5.392
(B6.5XFAD x BXD66)F1-ADtg m 37.5 8.5118 55.108 19.892
(B6.5XFAD x BXD68)F1-ADtg f 30.25 6.0188 42.7008 17.7992
(B6.5XFAD x BXD68)F1-ADtg m 34.8333 4.9143 44.9993 24.6673
(B6.5XFAD x BXD68)F1-Ntg f 34.5 6.0188 46.9508 22.0492
(B6.5XFAD x BXD68)F1-Ntg m 23.0 8.5118 40.608 5.392
(B6.5XFAD x BXD69)F1-ADtg f 40.0 6.0188 52.4508 27.5492
(B6.5XFAD x BXD69)F1-ADtg m 24.0 8.5118 41.608 6.392


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x BXD100)F1-ADtg both 35.5833 4.5969 45.0928 26.0739
(B6.5XFAD x BXD66)F1-ADtg both 30.25 6.0188 42.7008 17.7992
(B6.5XFAD x BXD68)F1-ADtg both 32.5417 3.8851 40.5786 24.5047
(B6.5XFAD x BXD68)F1-Ntg both 28.75 5.2124 39.5327 17.9673
(B6.5XFAD x BXD69)F1-ADtg both 32.0 5.2124 42.7827 21.2173




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA