Phenotype measure:   Neuner1   Ymaze_ent_16mo

ID, description, units MPD:65937   Ymaze_ent_16mo   number of arm entries in Y-maze   [n]  16 mo
Data set, strains Neuner1   F1 AD-BXD   16 strains     sex: both     age: 8-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - number of arm entries in Y-maze 16 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains12 strains
Mean of the strain means21.82   n 24.271   n
Median of the strain means19.5   n 23.25   n
SD of the strain means± 9.6159 ± 9.8164
Coefficient of variation (CV)0.4407 0.4044
Min–max range of strain means7.0   –   41.429   n 7.0   –   37.5   n
Mean sample size per strain2.8   mice 4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 15.8226 15.8226 0.117 0.7346
strain 5 3912.4436 782.4887 5.7871 0.0007
sex:strain 5 292.6394 58.5279 0.4329 0.8221
Residuals 31 4191.5595 135.2116


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 21.0 0.0   1   0.0 0.0 21.0, 21.0 -0.09
(B6.5XFAD x B6)F1-ADtg m 26.455 14.556   22 3.1034 0.5502 7.0, 66.0 0.22
(B6.5XFAD x B6)F1-Ntg f 41.429 7.1147   7 2.6891 0.1717 30.0, 51.0 2.04
(B6.5XFAD x B6)F1-Ntg m 36.714 18.31   7 6.9203 0.4987 16.0, 74.0 1.27
(B6.5XFAD x BXD44)F1-ADtg f 16.0 4.3589   3 2.5166 0.2724 13.0, 21.0 -0.61
(B6.5XFAD x BXD44)F1-ADtg m 19.75 7.932   4 3.966 0.4016 9.0, 28.0 -0.46
(B6.5XFAD x BXD44)F1-Ntg m 30.5 2.1213   2   1.5 0.0696 29.0, 32.0 0.63
(B6.5XFAD x BXD61)F1-ADtg f 22.4 10.831   5 4.8436 0.4835 12.0, 39.0 0.06
(B6.5XFAD x BXD61)F1-ADtg m 7.0 0.0   1   0.0 0.0 7.0, 7.0 -1.76
(B6.5XFAD x BXD61)F1-Ntg f 16.333 5.8595   3 3.383 0.3587 12.0, 23.0 -0.57
(B6.5XFAD x BXD61)F1-Ntg m 16.0 5.2915   3 3.0551 0.3307 12.0, 22.0 -0.84
(B6.5XFAD x BXD62)F1-ADtg f 18.0 7.0711   2   5.0 0.3928 13.0, 23.0 -0.4
(B6.5XFAD x BXD62)F1-Ntg f 15.0 0.0   1   0.0 0.0 15.0, 15.0 -0.71
(B6.5XFAD x BXD69)F1-ADtg f 7.0 0.0   1   0.0 0.0 7.0, 7.0 -1.54
(B6.5XFAD x BXD69)F1-ADtg m 23.0 5.6569   2   4.0 0.246 19.0, 27.0 -0.13
(B6.5XFAD x BXD69)F1-Ntg f 25.0 18.385   2   13.0 0.7354 12.0, 38.0 0.33
(B6.5XFAD x BXD69)F1-Ntg m 37.5 14.849   2   10.5 0.396 27.0, 48.0 1.35
(B6.5XFAD x BXD70)F1-ADtg m 12.333 1.5275   3 0.88192 0.1239 11.0, 14.0 -1.22
(B6.5XFAD x BXD70)F1-Ntg f 40.0 19.799   2   14.0 0.495 26.0, 54.0 1.89
(B6.5XFAD x BXD70)F1-Ntg m 36.5 7.7782   2   5.5 0.2131 31.0, 42.0 1.25
(B6.5XFAD x BXD77)F1-ADtg f 17.0 16.971   2   12.0 0.9983 5.0, 29.0 -0.5
(B6.5XFAD x BXD77)F1-Ntg f 25.0 8.2158   5 3.6742 0.3286 16.0, 35.0 0.33
(B6.5XFAD x D2)F1-ADtg f 19.5 19.092   2   13.5 0.9791 6.0, 33.0 -0.24
(B6.5XFAD x D2)F1-ADtg m 23.5 5.4681   6 2.2323 0.2327 15.0, 30.0 -0.08
(B6.5XFAD x D2)F1-Ntg m 22.0 5.5678   3 3.2146 0.2531 17.0, 28.0 -0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg f 41.4286 4.395 50.3922 32.4649
(B6.5XFAD x B6)F1-Ntg m 36.7143 4.395 45.6779 27.7506
(B6.5XFAD x BXD44)F1-ADtg f 16.0 6.7135 29.6922 2.3078
(B6.5XFAD x BXD44)F1-ADtg m 19.75 5.814 31.6078 7.8922
(B6.5XFAD x BXD61)F1-Ntg f 16.3333 6.7135 30.0255 2.6411
(B6.5XFAD x BXD61)F1-Ntg m 16.0 6.7135 29.6922 2.3078
(B6.5XFAD x BXD69)F1-Ntg f 25.0 8.2223 41.7694 8.2306
(B6.5XFAD x BXD69)F1-Ntg m 37.5 8.2223 54.2694 20.7306
(B6.5XFAD x BXD70)F1-Ntg f 40.0 8.2223 56.7694 23.2306
(B6.5XFAD x BXD70)F1-Ntg m 36.5 8.2223 53.2694 19.7306
(B6.5XFAD x D2)F1-ADtg f 19.5 8.2223 36.2694 2.7306
(B6.5XFAD x D2)F1-ADtg m 23.5 4.7471 33.1818 13.8182


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg both 39.0714 3.1077 45.4097 32.7332
(B6.5XFAD x BXD44)F1-ADtg both 17.875 4.4405 26.9315 8.8185
(B6.5XFAD x BXD61)F1-Ntg both 16.1667 4.7471 25.8485 6.4848
(B6.5XFAD x BXD69)F1-Ntg both 31.25 5.814 43.1078 19.3922
(B6.5XFAD x BXD70)F1-Ntg both 38.25 5.814 50.1078 26.3922
(B6.5XFAD x D2)F1-ADtg both 21.5 4.7471 31.1818 11.8182




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA