Phenotype measure:   Neuner1   Ymaze_ent_14mo

ID, description, units MPD:65936   Ymaze_ent_14mo   number of arm entries in Y-maze   [n]  14 mo
Data set, strains Neuner1   F1 AD-BXD   51 strains     sex: both     age: 8-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - number of arm entries in Y-maze 14 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested48 strains35 strains
Mean of the strain means23.924   n 20.917   n
Median of the strain means22.25   n 19.667   n
SD of the strain means± 8.5229 ± 7.5203
Coefficient of variation (CV)0.3563 0.3595
Min–max range of strain means11.2   –   45.25   n 9.3333   –   44.0   n
Mean sample size per strain4.3   mice 4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 479.1967 479.1967 5.484 0.0202
strain 23 8639.3845 375.6254 4.2987 < 0.0001
sex:strain 23 3198.7981 139.0782 1.5916 0.0483
Residuals 197 17213.9023 87.3802


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg m 26.294 10.276   17 2.4923 0.3908 10.0, 50.0 0.71
(B6.5XFAD x B6)F1-Ntg f 36.25 10.689   4 5.3444 0.2949 22.0, 47.0 1.45
(B6.5XFAD x B6)F1-Ntg m 26.143 6.8903   7 2.6043 0.2636 17.0, 38.0 0.69
(B6.5XFAD x BXD100)F1-ADtg f 17.0 0.0   1   0.0 0.0 17.0, 17.0 -0.81
(B6.5XFAD x BXD100)F1-ADtg m 12.143 7.244   7 2.738 0.5966 4.0, 25.0 -1.17
(B6.5XFAD x BXD100)F1-Ntg f 15.75 5.909   4 2.9545 0.3752 11.0, 24.0 -0.96
(B6.5XFAD x BXD100)F1-Ntg m 19.667 3.559   6 1.453 0.181 16.0, 25.0 -0.17
(B6.5XFAD x BXD14)F1-ADtg f 28.0 8.4853   2   6.0 0.303 22.0, 34.0 0.48
(B6.5XFAD x BXD14)F1-Ntg f 19.0 14.142   2   10.0 0.7443 9.0, 29.0 -0.58
(B6.5XFAD x BXD16)F1-ADtg f 17.75 12.606   4 6.3031 0.7102 8.0, 36.0 -0.72
(B6.5XFAD x BXD22)F1-ADtg f 25.5 23.335   2   16.5 0.9151 9.0, 42.0 0.18
(B6.5XFAD x BXD22)F1-Ntg f 19.0 9.5394   3 5.5076 0.5021 8.0, 25.0 -0.58
(B6.5XFAD x BXD32)F1-ADtg f 13.5 0.70711   2   0.5 0.0524 13.0, 14.0 -1.22
(B6.5XFAD x BXD32)F1-ADtg m 24.0 7.8102   3 4.5092 0.3254 19.0, 33.0 0.41
(B6.5XFAD x BXD32)F1-Ntg f 32.0 1.7321   3 1.0 0.0541 31.0, 34.0 0.95
(B6.5XFAD x BXD32)F1-Ntg m 31.5 10.607   2   7.5 0.3367 24.0, 39.0 1.41
(B6.5XFAD x BXD42)F1-ADtg f 13.0 5.6569   2   4.0 0.4351 9.0, 17.0 -1.28
(B6.5XFAD x BXD42)F1-Ntg f 16.0 0.0   1   0.0 0.0 16.0, 16.0 -0.93
(B6.5XFAD x BXD44)F1-ADtg f 17.615 5.2208   13 1.448 0.2964 10.0, 27.0 -0.74
(B6.5XFAD x BXD44)F1-ADtg m 17.125 7.624   8 2.6955 0.4452 5.0, 28.0 -0.5
(B6.5XFAD x BXD44)F1-Ntg f 18.0 0.0   1   0.0 0.0 18.0, 18.0 -0.7
(B6.5XFAD x BXD44)F1-Ntg m 22.333 1.1547   3 0.66667 0.0517 21.0, 23.0 0.19
(B6.5XFAD x BXD51)F1-ADtg f 21.0 8.438   6 3.4448 0.4018 14.0, 36.0 -0.34
(B6.5XFAD x BXD51)F1-Ntg f 24.5 10.661   4 5.3307 0.4352 11.0, 36.0 0.07
(B6.5XFAD x BXD55)F1-ADtg f 45.25 6.702   4 3.351 0.1481 38.0, 54.0 2.5
(B6.5XFAD x BXD55)F1-Ntg f 31.0 0.0   1   0.0 0.0 31.0, 31.0 0.83
(B6.5XFAD x BXD56)F1-ADtg m 16.333 7.7675   3 4.4845 0.4756 10.0, 25.0 -0.61
(B6.5XFAD x BXD56)F1-Ntg f 18.0 2.8284   2   2.0 0.1571 16.0, 20.0 -0.7
(B6.5XFAD x BXD56)F1-Ntg m 15.0 0.0   1   0.0 0.0 15.0, 15.0 -0.79
(B6.5XFAD x BXD60)F1-ADtg f 19.0 0.0   1   0.0 0.0 19.0, 19.0 -0.58
(B6.5XFAD x BXD60)F1-ADtg m 23.333 1.5275   3 0.88192 0.0655 22.0, 25.0 0.32
(B6.5XFAD x BXD60)F1-Ntg f 22.0 0.0   1   0.0 0.0 22.0, 22.0 -0.23
(B6.5XFAD x BXD61)F1-ADtg f 32.75 30.347   4 15.173 0.9266 8.0, 74.0 1.04
(B6.5XFAD x BXD61)F1-ADtg m 11.0 5.5678   3 3.2146 0.5062 5.0, 16.0 -1.32
(B6.5XFAD x BXD61)F1-Ntg f 14.2 4.0866   5 1.8276 0.2878 9.0, 20.0 -1.14
(B6.5XFAD x BXD61)F1-Ntg m 12.6 2.0736   5 0.92736 0.1646 9.0, 14.0 -1.11
(B6.5XFAD x BXD62)F1-ADtg f 24.0 8.4853   2   6.0 0.3536 18.0, 30.0 0.01
(B6.5XFAD x BXD62)F1-ADtg m 13.5 10.607   2   7.5 0.7857 6.0, 21.0 -0.99
(B6.5XFAD x BXD62)F1-Ntg f 17.333 4.5092   3 2.6034 0.2601 13.0, 22.0 -0.77
(B6.5XFAD x BXD62)F1-Ntg m 9.3333 3.2146   3 1.8559 0.3444 7.0, 13.0 -1.54
(B6.5XFAD x BXD65)F1-ADtg f 28.143 9.7882   7 3.6996 0.3478 18.0, 43.0 0.5
(B6.5XFAD x BXD65)F1-ADtg m 27.5 3.5355   2   2.5 0.1286 25.0, 30.0 0.88
(B6.5XFAD x BXD65)F1-Ntg f 21.625 9.2572   8 3.2729 0.4281 8.0, 32.0 -0.27
(B6.5XFAD x BXD65)F1-Ntg m 29.5 4.9497   2   3.5 0.1678 26.0, 33.0 1.14
(B6.5XFAD x BXD66)F1-ADtg f 19.0 11.533   3 6.6583 0.607 10.0, 32.0 -0.58
(B6.5XFAD x BXD66)F1-ADtg m 14.0 7.3485   4 3.6742 0.5249 5.0, 20.0 -0.92
(B6.5XFAD x BXD66)F1-Ntg f 27.0 0.0   1   0.0 0.0 27.0, 27.0 0.36
(B6.5XFAD x BXD66)F1-Ntg m 15.5 0.70711   2   0.5 0.0456 15.0, 16.0 -0.72
(B6.5XFAD x BXD68)F1-ADtg f 39.0 17.321   3 10.0 0.4441 29.0, 59.0 1.77
(B6.5XFAD x BXD68)F1-ADtg m 25.429 9.8802   7 3.7344 0.3885 11.0, 38.0 0.6
(B6.5XFAD x BXD68)F1-Ntg f 15.0 3.5901   10 1.1353 0.2393 10.0, 19.0 -1.05
(B6.5XFAD x BXD68)F1-Ntg m 16.5 9.1924   2   6.5 0.5571 10.0, 23.0 -0.59
(B6.5XFAD x BXD69)F1-ADtg f 39.833 12.734   6 5.1988 0.3197 26.0, 53.0 1.87
(B6.5XFAD x BXD69)F1-ADtg m 20.6 7.2664   5 3.2496 0.3527 12.0, 30.0 -0.04
(B6.5XFAD x BXD69)F1-Ntg f 30.6 14.893   5 6.6603 0.4867 16.0, 52.0 0.78
(B6.5XFAD x BXD69)F1-Ntg m 32.333 11.075   6 4.5216 0.3425 20.0, 51.0 1.52
(B6.5XFAD x BXD70)F1-ADtg f 12.0 0.0   1   0.0 0.0 12.0, 12.0 -1.4
(B6.5XFAD x BXD70)F1-ADtg m 20.0 7.5498   3 4.3589 0.3775 12.0, 27.0 -0.12
(B6.5XFAD x BXD70)F1-Ntg f 41.5 2.1213   2   1.5 0.0511 40.0, 43.0 2.06
(B6.5XFAD x BXD70)F1-Ntg m 31.5 2.1213   2   1.5 0.0673 30.0, 33.0 1.41
(B6.5XFAD x BXD75)F1-ADtg f 22.5 11.269   4 5.6347 0.5009 11.0, 38.0 -0.17
(B6.5XFAD x BXD75)F1-ADtg m 15.75 7.6322   4 3.8161 0.4846 9.0, 26.0 -0.69
(B6.5XFAD x BXD75)F1-Ntg f 11.2 4.8683   5 2.1772 0.4347 6.0, 19.0 -1.49
(B6.5XFAD x BXD75)F1-Ntg m 15.0 0.0   1   0.0 0.0 15.0, 15.0 -0.79
(B6.5XFAD x BXD77)F1-ADtg f 25.75 12.258   4 6.1288 0.476 13.0, 39.0 0.21
(B6.5XFAD x BXD77)F1-ADtg m 17.333 6.0277   3 3.4801 0.3478 11.0, 23.0 -0.48
(B6.5XFAD x BXD77)F1-Ntg f 20.0 8.4984   10 2.6874 0.4249 7.0, 34.0 -0.46
(B6.5XFAD x BXD77)F1-Ntg m 15.0 6.229   6 2.543 0.4153 7.0, 22.0 -0.79
(B6.5XFAD x BXD81)F1-ADtg f 39.667 2.9439   6 1.2019 0.0742 35.0, 43.0 1.85
(B6.5XFAD x BXD81)F1-Ntg f 37.2 15.007   5 6.7112 0.4034 15.0, 57.0 1.56
(B6.5XFAD x BXD87)F1-ADtg f 24.3 7.8323   10 2.4768 0.3223 13.0, 37.0 0.04
(B6.5XFAD x BXD87)F1-ADtg m 19.0 2.0   4 1.0 0.1053 18.0, 22.0 -0.25
(B6.5XFAD x BXD87)F1-Ntg f 17.333 5.8595   3 3.383 0.338 13.0, 24.0 -0.77
(B6.5XFAD x BXD87)F1-Ntg m 17.0 0.0   1   0.0 0.0 17.0, 17.0 -0.52
(B6.5XFAD x BXD89)F1-ADtg m 30.0 0.0   1   0.0 0.0 30.0, 30.0 1.21
(B6.5XFAD x BXD89)F1-Ntg f 22.5 3.5355   2   2.5 0.1571 20.0, 25.0 -0.17
(B6.5XFAD x BXD89)F1-Ntg m 44.0 2.8284   2   2.0 0.0643 42.0, 46.0 3.07
(B6.5XFAD x BXD99)F1-ADtg f 19.0 0.0   1   0.0 0.0 19.0, 19.0 -0.58
(B6.5XFAD x BXD99)F1-Ntg f 29.0 0.0   1   0.0 0.0 29.0, 29.0 0.6
(B6.5XFAD x D2)F1-ADtg f 23.222 11.436   18 2.6954 0.4924 7.0, 55.0 -0.08
(B6.5XFAD x D2)F1-ADtg m 21.857 10.699   7 4.044 0.4895 8.0, 34.0 0.12
(B6.5XFAD x D2)F1-Ntg f 25.571 9.3949   14 2.5109 0.3674 15.0, 46.0 0.19
(B6.5XFAD x D2)F1-Ntg m 24.0 7.4386   4 3.7193 0.3099 13.0, 29.0 0.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg f 36.25 4.6739 45.4672 27.0328
(B6.5XFAD x B6)F1-Ntg m 26.1429 3.5331 33.1104 19.1753
(B6.5XFAD x BXD100)F1-Ntg f 15.75 4.6739 24.9672 6.5328
(B6.5XFAD x BXD100)F1-Ntg m 19.6667 3.8162 27.1925 12.1408
(B6.5XFAD x BXD32)F1-ADtg f 13.5 6.6098 26.5351 0.4649
(B6.5XFAD x BXD32)F1-ADtg m 24.0 5.3969 34.6432 13.3568
(B6.5XFAD x BXD32)F1-Ntg f 32.0 5.3969 42.6432 21.3568
(B6.5XFAD x BXD32)F1-Ntg m 31.5 6.6098 44.5351 18.4649
(B6.5XFAD x BXD44)F1-ADtg f 17.6154 2.5926 22.7282 12.5026
(B6.5XFAD x BXD44)F1-ADtg m 17.125 3.3049 23.6426 10.6074
(B6.5XFAD x BXD61)F1-ADtg f 32.75 4.6739 41.9672 23.5328
(B6.5XFAD x BXD61)F1-ADtg m 11.0 5.3969 21.6432 0.3568
(B6.5XFAD x BXD61)F1-Ntg f 14.2 4.1804 22.4441 5.9559
(B6.5XFAD x BXD61)F1-Ntg m 12.6 4.1804 20.8441 4.3559
(B6.5XFAD x BXD62)F1-ADtg f 24.0 6.6098 37.0351 10.9649
(B6.5XFAD x BXD62)F1-ADtg m 13.5 6.6098 26.5351 0.4649
(B6.5XFAD x BXD62)F1-Ntg f 17.3333 5.3969 27.9765 6.6902
(B6.5XFAD x BXD62)F1-Ntg m 9.3333 5.3969 19.9765 -1.3098
(B6.5XFAD x BXD65)F1-ADtg f 28.1429 3.5331 35.1104 21.1753
(B6.5XFAD x BXD65)F1-ADtg m 27.5 6.6098 40.5351 14.4649
(B6.5XFAD x BXD65)F1-Ntg f 21.625 3.3049 28.1426 15.1074
(B6.5XFAD x BXD65)F1-Ntg m 29.5 6.6098 42.5351 16.4649
(B6.5XFAD x BXD66)F1-ADtg f 19.0 5.3969 29.6432 8.3568
(B6.5XFAD x BXD66)F1-ADtg m 14.0 4.6739 23.2172 4.7828
(B6.5XFAD x BXD68)F1-ADtg f 39.0 5.3969 49.6432 28.3568
(B6.5XFAD x BXD68)F1-ADtg m 25.4286 3.5331 32.3961 18.461
(B6.5XFAD x BXD68)F1-Ntg f 15.0 2.956 20.8295 9.1705
(B6.5XFAD x BXD68)F1-Ntg m 16.5 6.6098 29.5351 3.4649
(B6.5XFAD x BXD69)F1-ADtg f 39.8333 3.8162 47.3592 32.3075
(B6.5XFAD x BXD69)F1-ADtg m 20.6 4.1804 28.8441 12.3559
(B6.5XFAD x BXD69)F1-Ntg f 30.6 4.1804 38.8441 22.3559
(B6.5XFAD x BXD69)F1-Ntg m 32.3333 3.8162 39.8592 24.8075
(B6.5XFAD x BXD70)F1-Ntg f 41.5 6.6098 54.5351 28.4649
(B6.5XFAD x BXD70)F1-Ntg m 31.5 6.6098 44.5351 18.4649
(B6.5XFAD x BXD75)F1-ADtg f 22.5 4.6739 31.7172 13.2828
(B6.5XFAD x BXD75)F1-ADtg m 15.75 4.6739 24.9672 6.5328
(B6.5XFAD x BXD77)F1-ADtg f 25.75 4.6739 34.9672 16.5328
(B6.5XFAD x BXD77)F1-ADtg m 17.3333 5.3969 27.9765 6.6902
(B6.5XFAD x BXD77)F1-Ntg f 20.0 2.956 25.8295 14.1705
(B6.5XFAD x BXD77)F1-Ntg m 15.0 3.8162 22.5258 7.4742
(B6.5XFAD x BXD87)F1-ADtg f 24.3 2.956 30.1295 18.4705
(B6.5XFAD x BXD87)F1-ADtg m 19.0 4.6739 28.2172 9.7828
(B6.5XFAD x BXD89)F1-Ntg f 22.5 6.6098 35.5351 9.4649
(B6.5XFAD x BXD89)F1-Ntg m 44.0 6.6098 57.0351 30.9649
(B6.5XFAD x D2)F1-ADtg f 23.2222 2.2033 27.5673 18.8772
(B6.5XFAD x D2)F1-ADtg m 21.8571 3.5331 28.8247 14.8896
(B6.5XFAD x D2)F1-Ntg f 25.5714 2.4983 30.4983 20.6446
(B6.5XFAD x D2)F1-Ntg m 24.0 4.6739 33.2172 14.7828


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg both 31.1964 2.9295 36.9736 25.4192
(B6.5XFAD x BXD100)F1-Ntg both 17.7083 3.017 23.658 11.7586
(B6.5XFAD x BXD32)F1-ADtg both 18.75 4.2666 27.1642 10.3358
(B6.5XFAD x BXD32)F1-Ntg both 31.75 4.2666 40.1642 23.3358
(B6.5XFAD x BXD44)F1-ADtg both 17.3702 2.1002 21.512 13.2283
(B6.5XFAD x BXD61)F1-ADtg both 21.875 3.5697 28.9148 14.8352
(B6.5XFAD x BXD61)F1-Ntg both 13.4 2.956 19.2295 7.5705
(B6.5XFAD x BXD62)F1-ADtg both 18.75 4.6739 27.9672 9.5328
(B6.5XFAD x BXD62)F1-Ntg both 13.3333 3.8162 20.8592 5.8075
(B6.5XFAD x BXD65)F1-ADtg both 27.8214 3.7474 35.2117 20.4312
(B6.5XFAD x BXD65)F1-Ntg both 25.5625 3.695 32.8494 18.2756
(B6.5XFAD x BXD66)F1-ADtg both 16.5 3.5697 23.5398 9.4602
(B6.5XFAD x BXD68)F1-ADtg both 32.2143 3.2253 38.5748 25.8538
(B6.5XFAD x BXD68)F1-Ntg both 15.75 3.6204 22.8896 8.6104
(B6.5XFAD x BXD69)F1-ADtg both 30.2167 2.8302 35.798 24.6354
(B6.5XFAD x BXD69)F1-Ntg both 31.4667 2.8302 37.048 25.8854
(B6.5XFAD x BXD70)F1-Ntg both 36.5 4.6739 45.7172 27.2828
(B6.5XFAD x BXD75)F1-ADtg both 19.125 3.3049 25.6426 12.6074
(B6.5XFAD x BXD77)F1-ADtg both 21.5417 3.5697 28.5814 14.5019
(B6.5XFAD x BXD77)F1-Ntg both 17.5 2.4136 22.2598 12.7402
(B6.5XFAD x BXD87)F1-ADtg both 21.65 2.7651 27.103 16.197
(B6.5XFAD x BXD89)F1-Ntg both 33.25 4.6739 42.4672 24.0328
(B6.5XFAD x D2)F1-ADtg both 22.5397 2.0819 26.6454 18.434
(B6.5XFAD x D2)F1-Ntg both 24.7857 2.6498 30.0114 19.56




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA