Phenotype measure:   Neuner1   Ymaze_ent_12mo

ID, description, units MPD:65935   Ymaze_ent_12mo   number of arm entries in Y-maze   [n]  12 mo
Data set, strains Neuner1   F1 AD-BXD   49 strains     sex: both     age: 8-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - number of arm entries in Y-maze 12 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested46 strains35 strains
Mean of the strain means26.657   n 21.861   n
Median of the strain means26.875   n 20.4   n
SD of the strain means± 8.1663 ± 6.4483
Coefficient of variation (CV)0.3063 0.295
Min–max range of strain means9.0   –   39.833   n 10.667   –   34.0   n
Mean sample size per strain4.6   mice 4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 812.7829 812.7829 9.9259 0.0018
strain 25 11268.8534 450.7541 5.5047 < 0.0001
sex:strain 25 2812.1746 112.487 1.3737 0.1166
Residuals 240 19652.4084 81.885


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 36.25 8.8459   4 4.423 0.244 29.0, 49.0 1.17
(B6.5XFAD x B6)F1-ADtg m 27.333 9.4991   21 2.0729 0.3475 4.0, 46.0 0.85
(B6.5XFAD x B6)F1-Ntg f 38.778 17.852   9 5.9507 0.4604 5.0, 69.0 1.48
(B6.5XFAD x B6)F1-Ntg m 31.6 11.759   10 3.7184 0.3721 17.0, 49.0 1.51
(B6.5XFAD x BXD100)F1-ADtg f 19.5 10.607   2   7.5 0.5439 12.0, 27.0 -0.88
(B6.5XFAD x BXD100)F1-ADtg m 12.0 5.099   7 1.9272 0.4249 6.0, 20.0 -1.53
(B6.5XFAD x BXD100)F1-Ntg f 15.75 2.2174   4 1.1087 0.1408 14.0, 19.0 -1.34
(B6.5XFAD x BXD100)F1-Ntg m 12.5 3.937   6 1.6073 0.315 7.0, 17.0 -1.45
(B6.5XFAD x BXD14)F1-ADtg f 27.0 8.7178   3 5.0332 0.3229 21.0, 37.0 0.04
(B6.5XFAD x BXD14)F1-Ntg f 31.0 5.6569   2   4.0 0.1825 27.0, 35.0 0.53
(B6.5XFAD x BXD16)F1-ADtg f 11.0 4.2426   2   3.0 0.3857 8.0, 14.0 -1.92
(B6.5XFAD x BXD22)F1-ADtg f 24.0 21.213   2   15.0 0.8839 9.0, 39.0 -0.33
(B6.5XFAD x BXD22)F1-Ntg f 36.5 16.263   2   11.5 0.4456 25.0, 48.0 1.21
(B6.5XFAD x BXD32)F1-ADtg f 12.333 13.577   3 7.8387 1.1008 4.0, 28.0 -1.75
(B6.5XFAD x BXD32)F1-ADtg m 24.0 6.0828   3 3.5119 0.2534 20.0, 31.0 0.33
(B6.5XFAD x BXD32)F1-Ntg f 36.0 11.136   3 6.4291 0.3093 24.0, 46.0 1.14
(B6.5XFAD x BXD32)F1-Ntg m 29.0 7.0711   2   5.0 0.2438 24.0, 34.0 1.11
(B6.5XFAD x BXD44)F1-ADtg f 23.0 7.5919   12 2.1916 0.3301 14.0, 42.0 -0.45
(B6.5XFAD x BXD44)F1-ADtg m 18.833 2.7142   6 1.1081 0.1441 17.0, 24.0 -0.47
(B6.5XFAD x BXD44)F1-Ntg m 27.333 4.5092   3 2.6034 0.165 23.0, 32.0 0.85
(B6.5XFAD x BXD51)F1-ADtg f 20.0 3.937   5 1.7607 0.1969 14.0, 23.0 -0.82
(B6.5XFAD x BXD51)F1-Ntg f 21.0 8.4853   2   6.0 0.4041 15.0, 27.0 -0.69
(B6.5XFAD x BXD55)F1-ADtg f 38.25 10.626   4 5.3131 0.2778 29.0, 51.0 1.42
(B6.5XFAD x BXD55)F1-Ntg f 27.0 0.0   1   0.0 0.0 27.0, 27.0 0.04
(B6.5XFAD x BXD56)F1-ADtg m 16.667 9.0185   3 5.2068 0.5411 8.0, 26.0 -0.81
(B6.5XFAD x BXD56)F1-Ntg f 33.5 4.9497   2   3.5 0.1478 30.0, 37.0 0.84
(B6.5XFAD x BXD56)F1-Ntg m 20.0 0.0   1   0.0 0.0 20.0, 20.0 -0.29
(B6.5XFAD x BXD60)F1-ADtg f 30.0 3.4641   4 1.7321 0.1155 27.0, 35.0 0.41
(B6.5XFAD x BXD60)F1-ADtg m 26.0 1.2247   5 0.54772 0.0471 24.0, 27.0 0.64
(B6.5XFAD x BXD60)F1-Ntg f 34.0 2.8284   2   2.0 0.0832 32.0, 36.0 0.9
(B6.5XFAD x BXD61)F1-ADtg f 21.429 12.501   7 4.7251 0.5834 9.0, 45.0 -0.64
(B6.5XFAD x BXD61)F1-ADtg m 14.333 6.4291   3 3.7118 0.4485 7.0, 19.0 -1.17
(B6.5XFAD x BXD61)F1-Ntg f 11.4 3.0496   5 1.3638 0.2675 7.0, 15.0 -1.87
(B6.5XFAD x BXD61)F1-Ntg m 14.4 6.1074   5 2.7313 0.4241 6.0, 22.0 -1.16
(B6.5XFAD x BXD62)F1-ADtg f 26.75 10.145   4 5.0724 0.3792 19.0, 41.0 0.01
(B6.5XFAD x BXD62)F1-ADtg m 14.5 2.1213   2   1.5 0.1463 13.0, 16.0 -1.14
(B6.5XFAD x BXD62)F1-Ntg f 17.333 8.0208   3 4.6308 0.4627 9.0, 25.0 -1.14
(B6.5XFAD x BXD62)F1-Ntg m 10.667 4.1633   3 2.4037 0.3903 6.0, 14.0 -1.74
(B6.5XFAD x BXD65)F1-ADtg f 32.167 10.068   6 4.1103 0.313 20.0, 43.0 0.67
(B6.5XFAD x BXD65)F1-ADtg m 24.5 3.5355   2   2.5 0.1443 22.0, 27.0 0.41
(B6.5XFAD x BXD65)F1-Ntg f 24.0 5.6273   7 2.1269 0.2345 18.0, 32.0 -0.33
(B6.5XFAD x BXD65)F1-Ntg m 18.5 4.9497   2   3.5 0.2676 15.0, 22.0 -0.52
(B6.5XFAD x BXD66)F1-ADtg f 24.0 5.6569   2   4.0 0.2357 20.0, 28.0 -0.33
(B6.5XFAD x BXD66)F1-ADtg m 14.0 2.1602   4 1.0801 0.1543 12.0, 17.0 -1.22
(B6.5XFAD x BXD66)F1-Ntg f 29.0 0.0   1   0.0 0.0 29.0, 29.0 0.29
(B6.5XFAD x BXD66)F1-Ntg m 20.333 10.017   3 5.7831 0.4926 10.0, 30.0 -0.24
(B6.5XFAD x BXD68)F1-ADtg f 35.333 1.5275   3 0.88192 0.0432 34.0, 37.0 1.06
(B6.5XFAD x BXD68)F1-ADtg m 26.143 9.5119   7 3.5952 0.3638 12.0, 43.0 0.66
(B6.5XFAD x BXD68)F1-Ntg f 20.8 7.1461   10 2.2598 0.3436 14.0, 35.0 -0.72
(B6.5XFAD x BXD68)F1-Ntg m 29.0 2.8284   2   2.0 0.0975 27.0, 31.0 1.11
(B6.5XFAD x BXD69)F1-ADtg f 39.833 12.09   6 4.9357 0.3035 25.0, 56.0 1.61
(B6.5XFAD x BXD69)F1-ADtg m 20.4 6.6558   5 2.9766 0.3263 13.0, 28.0 -0.23
(B6.5XFAD x BXD69)F1-Ntg f 32.4 7.4699   5 3.3407 0.2306 27.0, 45.0 0.7
(B6.5XFAD x BXD69)F1-Ntg m 34.0 11.225   6 4.5826 0.3301 26.0, 56.0 1.88
(B6.5XFAD x BXD70)F1-ADtg f 36.0 0.0   1   0.0 0.0 36.0, 36.0 1.14
(B6.5XFAD x BXD70)F1-ADtg m 25.0 5.2915   3 3.0551 0.2117 21.0, 31.0 0.49
(B6.5XFAD x BXD70)F1-Ntg f 31.0 0.0   1   0.0 0.0 31.0, 31.0 0.53
(B6.5XFAD x BXD70)F1-Ntg m 19.5 4.9497   2   3.5 0.2538 16.0, 23.0 -0.37
(B6.5XFAD x BXD75)F1-ADtg f 20.5 6.8069   4 3.4034 0.332 12.0, 26.0 -0.75
(B6.5XFAD x BXD75)F1-ADtg m 19.75 7.4106   4 3.7053 0.3752 12.0, 29.0 -0.33
(B6.5XFAD x BXD75)F1-Ntg f 19.5 10.597   6 4.3263 0.5434 8.0, 38.0 -0.88
(B6.5XFAD x BXD75)F1-Ntg m 31.0 0.0   1   0.0 0.0 31.0, 31.0 1.42
(B6.5XFAD x BXD77)F1-ADtg f 23.8 6.8702   5 3.0725 0.2887 17.0, 34.0 -0.35
(B6.5XFAD x BXD77)F1-ADtg m 16.667 2.0817   3 1.2019 0.1249 15.0, 19.0 -0.81
(B6.5XFAD x BXD77)F1-Ntg f 25.0 7.6158   10 2.4083 0.3046 15.0, 39.0 -0.2
(B6.5XFAD x BXD77)F1-Ntg m 16.167 5.947   6 2.4278 0.3679 6.0, 21.0 -0.88
(B6.5XFAD x BXD81)F1-ADtg f 33.833 8.9312   6 3.6462 0.264 21.0, 44.0 0.88
(B6.5XFAD x BXD81)F1-Ntg f 39.0 14.265   5 6.3797 0.3658 18.0, 58.0 1.51
(B6.5XFAD x BXD87)F1-ADtg f 21.0 9.6609   10 3.0551 0.46 7.0, 31.0 -0.69
(B6.5XFAD x BXD87)F1-ADtg m 20.75 4.113   4 2.0565 0.1982 17.0, 26.0 -0.17
(B6.5XFAD x BXD87)F1-Ntg f 21.0 6.5574   3 3.7859 0.3123 14.0, 27.0 -0.69
(B6.5XFAD x BXD87)F1-Ntg m 22.0 0.0   1   0.0 0.0 22.0, 22.0 0.02
(B6.5XFAD x BXD89)F1-ADtg m 26.0 0.0   1   0.0 0.0 26.0, 26.0 0.64
(B6.5XFAD x BXD89)F1-Ntg f 33.5 3.5355   2   2.5 0.1055 31.0, 36.0 0.84
(B6.5XFAD x BXD89)F1-Ntg m 28.0 5.6569   2   4.0 0.202 24.0, 32.0 0.95
(B6.5XFAD x BXD99)F1-ADtg f 9.0 0.0   1   0.0 0.0 9.0, 9.0 -2.16
(B6.5XFAD x BXD99)F1-Ntg f 33.0 0.0   1   0.0 0.0 33.0, 33.0 0.78
(B6.5XFAD x D2)F1-ADtg f 27.118 12.584   17 3.0521 0.4641 5.0, 53.0 0.06
(B6.5XFAD x D2)F1-ADtg m 20.25 11.068   8 3.9131 0.5466 9.0, 37.0 -0.25
(B6.5XFAD x D2)F1-Ntg f 23.667 9.9392   12 2.8692 0.42 11.0, 37.0 -0.37
(B6.5XFAD x D2)F1-Ntg m 34.0 6.1644   5 2.7568 0.1813 30.0, 44.0 1.88


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 36.25 4.5245 45.1628 27.3372
(B6.5XFAD x B6)F1-ADtg m 27.3333 1.9747 31.2232 23.4435
(B6.5XFAD x B6)F1-Ntg f 38.7778 3.0163 44.7197 32.8359
(B6.5XFAD x B6)F1-Ntg m 31.6 2.8616 37.237 25.963
(B6.5XFAD x BXD100)F1-ADtg f 19.5 6.3986 32.1047 6.8953
(B6.5XFAD x BXD100)F1-ADtg m 12.0 3.4202 18.7375 5.2625
(B6.5XFAD x BXD100)F1-Ntg f 15.75 4.5245 24.6628 6.8372
(B6.5XFAD x BXD100)F1-Ntg m 12.5 3.6943 19.7773 5.2227
(B6.5XFAD x BXD32)F1-ADtg f 12.3333 5.2245 22.625 2.0417
(B6.5XFAD x BXD32)F1-ADtg m 24.0 5.2245 34.2917 13.7083
(B6.5XFAD x BXD32)F1-Ntg f 36.0 5.2245 46.2917 25.7083
(B6.5XFAD x BXD32)F1-Ntg m 29.0 6.3986 41.6047 16.3953
(B6.5XFAD x BXD44)F1-ADtg f 23.0 2.6122 28.1458 17.8542
(B6.5XFAD x BXD44)F1-ADtg m 18.8333 3.6943 26.1106 11.556
(B6.5XFAD x BXD60)F1-ADtg f 30.0 4.5245 38.9128 21.0872
(B6.5XFAD x BXD60)F1-ADtg m 26.0 4.0469 33.9719 18.0281
(B6.5XFAD x BXD61)F1-ADtg f 21.4286 3.4202 28.166 14.6911
(B6.5XFAD x BXD61)F1-ADtg m 14.3333 5.2245 24.625 4.0417
(B6.5XFAD x BXD61)F1-Ntg f 11.4 4.0469 19.3719 3.4281
(B6.5XFAD x BXD61)F1-Ntg m 14.4 4.0469 22.3719 6.4281
(B6.5XFAD x BXD62)F1-ADtg f 26.75 4.5245 35.6628 17.8372
(B6.5XFAD x BXD62)F1-ADtg m 14.5 6.3986 27.1047 1.8953
(B6.5XFAD x BXD62)F1-Ntg f 17.3333 5.2245 27.625 7.0417
(B6.5XFAD x BXD62)F1-Ntg m 10.6667 5.2245 20.9583 0.375
(B6.5XFAD x BXD65)F1-ADtg f 32.1667 3.6943 39.444 24.8894
(B6.5XFAD x BXD65)F1-ADtg m 24.5 6.3986 37.1047 11.8953
(B6.5XFAD x BXD65)F1-Ntg f 24.0 3.4202 30.7375 17.2625
(B6.5XFAD x BXD65)F1-Ntg m 18.5 6.3986 31.1047 5.8953
(B6.5XFAD x BXD66)F1-ADtg f 24.0 6.3986 36.6047 11.3953
(B6.5XFAD x BXD66)F1-ADtg m 14.0 4.5245 22.9128 5.0872
(B6.5XFAD x BXD68)F1-ADtg f 35.3333 5.2245 45.625 25.0417
(B6.5XFAD x BXD68)F1-ADtg m 26.1429 3.4202 32.8803 19.4054
(B6.5XFAD x BXD68)F1-Ntg f 20.8 2.8616 26.437 15.163
(B6.5XFAD x BXD68)F1-Ntg m 29.0 6.3986 41.6047 16.3953
(B6.5XFAD x BXD69)F1-ADtg f 39.8333 3.6943 47.1106 32.556
(B6.5XFAD x BXD69)F1-ADtg m 20.4 4.0469 28.3719 12.4281
(B6.5XFAD x BXD69)F1-Ntg f 32.4 4.0469 40.3719 24.4281
(B6.5XFAD x BXD69)F1-Ntg m 34.0 3.6943 41.2773 26.7227
(B6.5XFAD x BXD75)F1-ADtg f 20.5 4.5245 29.4128 11.5872
(B6.5XFAD x BXD75)F1-ADtg m 19.75 4.5245 28.6628 10.8372
(B6.5XFAD x BXD77)F1-ADtg f 23.8 4.0469 31.7719 15.8281
(B6.5XFAD x BXD77)F1-ADtg m 16.6667 5.2245 26.9583 6.375
(B6.5XFAD x BXD77)F1-Ntg f 25.0 2.8616 30.637 19.363
(B6.5XFAD x BXD77)F1-Ntg m 16.1667 3.6943 23.444 8.8894
(B6.5XFAD x BXD87)F1-ADtg f 21.0 2.8616 26.637 15.363
(B6.5XFAD x BXD87)F1-ADtg m 20.75 4.5245 29.6628 11.8372
(B6.5XFAD x BXD89)F1-Ntg f 33.5 6.3986 46.1047 20.8953
(B6.5XFAD x BXD89)F1-Ntg m 28.0 6.3986 40.6047 15.3953
(B6.5XFAD x D2)F1-ADtg f 27.1176 2.1947 31.441 22.7943
(B6.5XFAD x D2)F1-ADtg m 20.25 3.1993 26.5523 13.9477
(B6.5XFAD x D2)F1-Ntg f 23.6667 2.6122 28.8125 18.5208
(B6.5XFAD x D2)F1-Ntg m 34.0 4.0469 41.9719 26.0281


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 31.7917 2.4683 36.654 26.9293
(B6.5XFAD x B6)F1-Ntg both 35.1889 2.0789 39.2841 31.0937
(B6.5XFAD x BXD100)F1-ADtg both 15.75 3.6277 22.8962 8.6038
(B6.5XFAD x BXD100)F1-Ntg both 14.125 2.9206 19.8782 8.3718
(B6.5XFAD x BXD32)F1-ADtg both 18.1667 3.6943 25.444 10.8894
(B6.5XFAD x BXD32)F1-Ntg both 32.5 4.1303 40.6363 24.3637
(B6.5XFAD x BXD44)F1-ADtg both 20.9167 2.2623 25.3731 16.4602
(B6.5XFAD x BXD60)F1-ADtg both 28.0 3.0351 33.9789 22.0211
(B6.5XFAD x BXD61)F1-ADtg both 17.881 3.1222 24.0314 11.7305
(B6.5XFAD x BXD61)F1-Ntg both 12.9 2.8616 18.537 7.263
(B6.5XFAD x BXD62)F1-ADtg both 20.625 3.9183 28.3437 12.9063
(B6.5XFAD x BXD62)F1-Ntg both 14.0 3.6943 21.2773 6.7227
(B6.5XFAD x BXD65)F1-ADtg both 28.3333 3.6943 35.6106 21.056
(B6.5XFAD x BXD65)F1-Ntg both 21.25 3.6277 28.3962 14.1038
(B6.5XFAD x BXD66)F1-ADtg both 19.0 3.9183 26.7187 11.2813
(B6.5XFAD x BXD68)F1-ADtg both 30.7381 3.1222 36.8885 24.5877
(B6.5XFAD x BXD68)F1-Ntg both 24.9 3.5047 31.8039 17.9961
(B6.5XFAD x BXD69)F1-ADtg both 30.1167 2.7397 35.5137 24.7197
(B6.5XFAD x BXD69)F1-Ntg both 33.2 2.7397 38.597 27.803
(B6.5XFAD x BXD75)F1-ADtg both 20.125 3.1993 26.4273 13.8227
(B6.5XFAD x BXD77)F1-ADtg both 20.2333 3.3042 26.7423 13.7243
(B6.5XFAD x BXD77)F1-Ntg both 20.5833 2.3365 25.1859 15.9808
(B6.5XFAD x BXD87)F1-ADtg both 20.875 2.6767 26.1479 15.6021
(B6.5XFAD x BXD89)F1-Ntg both 30.75 4.5245 39.6628 21.8372
(B6.5XFAD x D2)F1-ADtg both 23.6838 1.9399 27.5052 19.8625
(B6.5XFAD x D2)F1-Ntg both 28.8333 2.4084 33.5776 24.0891




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA