Phenotype measure:   Neuner1   Ymaze_ent_6mo


  STRAIN COMPARISON PLOT
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Neuner1 - number of arm entries in Y-maze 6 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains33 strains
Mean of the strain means27.409   n 21.813   n
Median of the strain means28.611   n 22.0   n
SD of the strain means± 8.1894 ± 6.9411
Coefficient of variation (CV)0.2988 0.3182
Min–max range of strain means11.333   –   47.833   n 9.0   –   36.833   n
Mean sample size per strain6.9   mice 5.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 852.5115 852.5115 11.5374 0.0008
strain 29 16910.586 583.1237 7.8917 < 0.0001
sex:strain 29 2287.0787 78.8648 1.0673 0.3755
Residuals 352 26009.6977 73.8912


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 30.5 7.6092   6 3.1064 0.2495 19.0, 40.0 0.38
(B6.5XFAD x B6)F1-ADtg m 28.923 6.4091   13 1.7776 0.2216 18.0, 38.0 1.02
(B6.5XFAD x B6)F1-Ntg f 37.167 13.072   12 3.7736 0.3517 9.0, 59.0 1.19
(B6.5XFAD x B6)F1-Ntg m 28.8 6.8118   10 2.1541 0.2365 18.0, 37.0 1.01
(B6.5XFAD x BXD100)F1-ADtg f 11.333 5.2409   6 2.1396 0.4624 5.0, 20.0 -1.96
(B6.5XFAD x BXD100)F1-ADtg m 11.75 3.6936   8 1.3059 0.3144 8.0, 17.0 -1.45
(B6.5XFAD x BXD100)F1-Ntg f 17.833 3.9707   6 1.621 0.2227 12.0, 22.0 -1.17
(B6.5XFAD x BXD100)F1-Ntg m 15.0 4.8477   5 2.1679 0.3232 10.0, 21.0 -0.98
(B6.5XFAD x BXD14)F1-ADtg f 30.222 12.785   9 4.2615 0.423 20.0, 52.0 0.34
(B6.5XFAD x BXD14)F1-Ntg f 33.0 11.225   4 5.6125 0.3402 19.0, 46.0 0.68
(B6.5XFAD x BXD16)F1-ADtg f 35.875 8.6757   8 3.0673 0.2418 21.0, 48.0 1.03
(B6.5XFAD x BXD22)F1-ADtg f 37.25 5.909   4 2.9545 0.1586 33.0, 46.0 1.2
(B6.5XFAD x BXD22)F1-Ntg f 34.0 6.6833   4 3.3417 0.1966 26.0, 40.0 0.8
(B6.5XFAD x BXD2)F1-ADtg f 18.75 5.9221   8 2.0938 0.3158 11.0, 31.0 -1.06
(B6.5XFAD x BXD2)F1-Ntg f 22.429 4.237   7 1.6014 0.1889 17.0, 30.0 -0.61
(B6.5XFAD x BXD32)F1-ADtg f 33.625 13.027   8 4.6057 0.3874 14.0, 53.0 0.76
(B6.5XFAD x BXD32)F1-ADtg m 29.0 6.0332   6 2.4631 0.208 21.0, 39.0 1.04
(B6.5XFAD x BXD32)F1-Ntg f 34.5 7.3258   4 3.6629 0.2123 27.0, 43.0 0.87
(B6.5XFAD x BXD32)F1-Ntg m 24.25 4.5735   4 2.2867 0.1886 21.0, 31.0 0.35
(B6.5XFAD x BXD34)F1-ADtg f 16.111 4.4001   9 1.4667 0.2731 6.0, 20.0 -1.38
(B6.5XFAD x BXD34)F1-Ntg f 17.0 6.7823   10 2.1448 0.399 6.0, 26.0 -1.27
(B6.5XFAD x BXD42)F1-ADtg f 29.222 9.4707   9 3.1569 0.3241 16.0, 44.0 0.22
(B6.5XFAD x BXD42)F1-Ntg f 31.6 11.95   5 5.3442 0.3782 22.0, 52.0 0.51
(B6.5XFAD x BXD44)F1-ADtg f 21.714 9.025   14 2.412 0.4156 7.0, 36.0 -0.7
(B6.5XFAD x BXD44)F1-ADtg m 18.1 7.4005   10 2.3402 0.4089 7.0, 28.0 -0.53
(B6.5XFAD x BXD44)F1-Ntg f 22.0 9.8995   2   7.0 0.45 15.0, 29.0 -0.66
(B6.5XFAD x BXD44)F1-Ntg m 30.5 9.3986   4 4.6993 0.3082 19.0, 40.0 1.25
(B6.5XFAD x BXD51)F1-ADtg f 29.778 9.0385   9 3.0128 0.3035 12.0, 46.0 0.29
(B6.5XFAD x BXD51)F1-Ntg f 34.0 11.888   7 4.4934 0.3497 24.0, 55.0 0.8
(B6.5XFAD x BXD55)F1-ADtg f 30.0 10.914   10 3.4512 0.3638 18.0, 47.0 0.32
(B6.5XFAD x BXD55)F1-Ntg f 47.833 17.971   6 7.3367 0.3757 33.0, 82.0 2.49
(B6.5XFAD x BXD56)F1-ADtg f 30.5 0.70711   2   0.5 0.0232 30.0, 31.0 0.38
(B6.5XFAD x BXD56)F1-ADtg m 18.667 4.1633   3 2.4037 0.223 14.0, 22.0 -0.45
(B6.5XFAD x BXD56)F1-Ntg f 28.0 13.748   5 6.1482 0.491 7.0, 39.0 0.07
(B6.5XFAD x BXD56)F1-Ntg m 21.0 0.0   1   0.0 0.0 21.0, 21.0 -0.12
(B6.5XFAD x BXD60)F1-ADtg f 16.8 4.2071   5 1.8815 0.2504 10.0, 21.0 -1.3
(B6.5XFAD x BXD60)F1-ADtg m 18.6 11.718   5 5.2402 0.63 8.0, 37.0 -0.46
(B6.5XFAD x BXD60)F1-Ntg f 30.75 8.1803   4 4.0901 0.266 23.0, 42.0 0.41
(B6.5XFAD x BXD61)F1-ADtg f 19.0 6.2249   9 2.075 0.3276 9.0, 27.0 -1.03
(B6.5XFAD x BXD61)F1-ADtg m 17.75 9.0692   4 4.5346 0.5109 11.0, 31.0 -0.59
(B6.5XFAD x BXD61)F1-Ntg f 19.5 3.9875   6 1.6279 0.2045 13.0, 23.0 -0.97
(B6.5XFAD x BXD61)F1-Ntg m 26.875 6.3344   8 2.2396 0.2357 16.0, 36.0 0.73
(B6.5XFAD x BXD62)F1-ADtg f 13.0 0.0   1   0.0 0.0 13.0, 13.0 -1.76
(B6.5XFAD x BXD62)F1-ADtg m 9.5 6.364   2   4.5 0.6699 5.0, 14.0 -1.77
(B6.5XFAD x BXD62)F1-Ntg f 15.667 7.7675   3 4.4845 0.4958 7.0, 22.0 -1.43
(B6.5XFAD x BXD62)F1-Ntg m 9.0 1.7321   3 1.0 0.1925 7.0, 10.0 -1.85
(B6.5XFAD x BXD65)F1-ADtg f 35.6 8.8969   10 2.8135 0.2499 23.0, 50.0 1.0
(B6.5XFAD x BXD65)F1-ADtg m 29.75 5.1881   4 2.5941 0.1744 25.0, 36.0 1.14
(B6.5XFAD x BXD65)F1-Ntg f 37.778 12.05   9 4.0166 0.319 27.0, 59.0 1.27
(B6.5XFAD x BXD65)F1-Ntg m 36.833 8.9759   6 3.6644 0.2437 28.0, 50.0 2.16
(B6.5XFAD x BXD66)F1-ADtg f 18.0 5.7155   4 2.8577 0.3175 11.0, 24.0 -1.15
(B6.5XFAD x BXD66)F1-ADtg m 11.222 7.1375   9 2.3792 0.636 7.0, 30.0 -1.53
(B6.5XFAD x BXD66)F1-Ntg f 20.5 4.9497   2   3.5 0.2415 17.0, 24.0 -0.84
(B6.5XFAD x BXD66)F1-Ntg m 15.0 4.3012   5 1.9235 0.2867 9.0, 21.0 -0.98
(B6.5XFAD x BXD68)F1-ADtg f 24.333 8.3666   9 2.7889 0.3438 15.0, 40.0 -0.38
(B6.5XFAD x BXD68)F1-ADtg m 17.0 7.5404   8 2.6659 0.4436 7.0, 29.0 -0.69
(B6.5XFAD x BXD68)F1-Ntg f 24.316 6.1378   19 1.4081 0.2524 16.0, 37.0 -0.38
(B6.5XFAD x BXD68)F1-Ntg m 26.5 5.0662   4 2.5331 0.1912 19.0, 30.0 0.68
(B6.5XFAD x BXD69)F1-ADtg f 30.0 13.292   4 6.6458 0.4431 14.0, 46.0 0.32
(B6.5XFAD x BXD69)F1-ADtg m 24.5 6.921   6 2.8255 0.2825 14.0, 31.0 0.39
(B6.5XFAD x BXD69)F1-Ntg f 26.5 6.6081   4 3.304 0.2494 19.0, 33.0 -0.11
(B6.5XFAD x BXD69)F1-Ntg m 26.333 10.912   6 4.4547 0.4144 17.0, 43.0 0.65
(B6.5XFAD x BXD70)F1-ADtg f 24.0 0.0   1   0.0 0.0 24.0, 24.0 -0.42
(B6.5XFAD x BXD70)F1-Ntg f 31.0 0.0   1   0.0 0.0 31.0, 31.0 0.44
(B6.5XFAD x BXD75)F1-ADtg f 21.125 8.8872   8 3.1421 0.4207 12.0, 39.0 -0.77
(B6.5XFAD x BXD75)F1-ADtg m 14.667 4.3205   6 1.7638 0.2946 9.0, 20.0 -1.03
(B6.5XFAD x BXD75)F1-Ntg f 22.889 5.7759   9 1.9253 0.2523 14.0, 33.0 -0.55
(B6.5XFAD x BXD75)F1-Ntg m 22.0 5.6569   2   4.0 0.2571 18.0, 26.0 0.03
(B6.5XFAD x BXD77)F1-ADtg f 24.0 9.2087   6 3.7594 0.3837 15.0, 40.0 -0.42
(B6.5XFAD x BXD77)F1-ADtg m 15.75 6.2915   4 3.1458 0.3995 10.0, 23.0 -0.87
(B6.5XFAD x BXD77)F1-Ntg f 22.25 10.532   12 3.0404 0.4734 7.0, 40.0 -0.63
(B6.5XFAD x BXD77)F1-Ntg m 20.5 6.6117   8 2.3376 0.3225 10.0, 29.0 -0.19
(B6.5XFAD x BXD81)F1-ADtg f 32.833 10.836   12 3.1282 0.33 21.0, 62.0 0.66
(B6.5XFAD x BXD81)F1-Ntg f 41.75 13.069   8 4.6204 0.313 28.0, 59.0 1.75
(B6.5XFAD x BXD87)F1-ADtg f 18.167 5.7656   12 1.6644 0.3174 8.0, 27.0 -1.13
(B6.5XFAD x BXD87)F1-ADtg m 23.8 19.791   5 8.851 0.8316 12.0, 59.0 0.29
(B6.5XFAD x BXD87)F1-Ntg f 24.0 11.662   6 4.761 0.4859 7.0, 43.0 -0.42
(B6.5XFAD x BXD87)F1-Ntg m 23.25 8.0156   4 4.0078 0.3448 17.0, 35.0 0.21
(B6.5XFAD x BXD89)F1-ADtg m 20.0 0.0   1   0.0 0.0 20.0, 20.0 -0.26
(B6.5XFAD x BXD89)F1-Ntg f 38.5 9.1924   2   6.5 0.2388 32.0, 45.0 1.35
(B6.5XFAD x BXD89)F1-Ntg m 28.5 2.1213   2   1.5 0.0744 27.0, 30.0 0.96
(B6.5XFAD x BXD99)F1-ADtg f 29.75 6.4485   4 3.2243 0.2168 22.0, 36.0 0.29
(B6.5XFAD x BXD99)F1-Ntg f 45.0 0.0   1   0.0 0.0 45.0, 45.0 2.15
(B6.5XFAD x D2)F1-ADtg f 32.4 9.7453   15 2.5162 0.3008 14.0, 46.0 0.61
(B6.5XFAD x D2)F1-ADtg m 24.923 5.8375   13 1.619 0.2342 15.0, 34.0 0.45
(B6.5XFAD x D2)F1-Ntg f 26.462 10.713   13 2.9713 0.4049 8.0, 42.0 -0.12
(B6.5XFAD x D2)F1-Ntg m 31.6 15.357   10 4.8562 0.486 14.0, 69.0 1.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 30.5 3.5093 37.4018 23.5982
(B6.5XFAD x B6)F1-ADtg m 28.9231 2.3841 33.612 24.2342
(B6.5XFAD x B6)F1-Ntg f 37.1667 2.4815 42.047 32.2863
(B6.5XFAD x B6)F1-Ntg m 28.8 2.7183 34.1461 23.4539
(B6.5XFAD x BXD100)F1-ADtg f 11.3333 3.5093 18.2352 4.4315
(B6.5XFAD x BXD100)F1-ADtg m 11.75 3.0391 17.7272 5.7728
(B6.5XFAD x BXD100)F1-Ntg f 17.8333 3.5093 24.7352 10.9315
(B6.5XFAD x BXD100)F1-Ntg m 15.0 3.8442 22.5606 7.4394
(B6.5XFAD x BXD32)F1-ADtg f 33.625 3.0391 39.6022 27.6478
(B6.5XFAD x BXD32)F1-ADtg m 29.0 3.5093 35.9018 22.0982
(B6.5XFAD x BXD32)F1-Ntg f 34.5 4.298 42.953 26.047
(B6.5XFAD x BXD32)F1-Ntg m 24.25 4.298 32.703 15.797
(B6.5XFAD x BXD44)F1-ADtg f 21.7143 2.2974 26.2326 17.196
(B6.5XFAD x BXD44)F1-ADtg m 18.1 2.7183 23.4461 12.7539
(B6.5XFAD x BXD44)F1-Ntg f 22.0 6.0783 33.9543 10.0457
(B6.5XFAD x BXD44)F1-Ntg m 30.5 4.298 38.953 22.047
(B6.5XFAD x BXD56)F1-ADtg f 30.5 6.0783 42.4543 18.5457
(B6.5XFAD x BXD56)F1-ADtg m 18.6667 4.9629 28.4273 8.906
(B6.5XFAD x BXD60)F1-ADtg f 16.8 3.8442 24.3606 9.2394
(B6.5XFAD x BXD60)F1-ADtg m 18.6 3.8442 26.1606 11.0394
(B6.5XFAD x BXD61)F1-ADtg f 19.0 2.8653 24.6353 13.3647
(B6.5XFAD x BXD61)F1-ADtg m 17.75 4.298 26.203 9.297
(B6.5XFAD x BXD61)F1-Ntg f 19.5 3.5093 26.4018 12.5982
(B6.5XFAD x BXD61)F1-Ntg m 26.875 3.0391 32.8522 20.8978
(B6.5XFAD x BXD62)F1-Ntg f 15.6667 4.9629 25.4273 5.906
(B6.5XFAD x BXD62)F1-Ntg m 9.0 4.9629 18.7607 -0.7607
(B6.5XFAD x BXD65)F1-ADtg f 35.6 2.7183 40.9461 30.2539
(B6.5XFAD x BXD65)F1-ADtg m 29.75 4.298 38.203 21.297
(B6.5XFAD x BXD65)F1-Ntg f 37.7778 2.8653 43.4131 32.1425
(B6.5XFAD x BXD65)F1-Ntg m 36.8333 3.5093 43.7352 29.9315
(B6.5XFAD x BXD66)F1-ADtg f 18.0 4.298 26.453 9.547
(B6.5XFAD x BXD66)F1-ADtg m 11.2222 2.8653 16.8575 5.5869
(B6.5XFAD x BXD66)F1-Ntg f 20.5 6.0783 32.4543 8.5457
(B6.5XFAD x BXD66)F1-Ntg m 15.0 3.8442 22.5606 7.4394
(B6.5XFAD x BXD68)F1-ADtg f 24.3333 2.8653 29.9687 18.698
(B6.5XFAD x BXD68)F1-ADtg m 17.0 3.0391 22.9772 11.0228
(B6.5XFAD x BXD68)F1-Ntg f 24.3158 1.9721 28.1943 20.4373
(B6.5XFAD x BXD68)F1-Ntg m 26.5 4.298 34.953 18.047
(B6.5XFAD x BXD69)F1-ADtg f 30.0 4.298 38.453 21.547
(B6.5XFAD x BXD69)F1-ADtg m 24.5 3.5093 31.4018 17.5982
(B6.5XFAD x BXD69)F1-Ntg f 26.5 4.298 34.953 18.047
(B6.5XFAD x BXD69)F1-Ntg m 26.3333 3.5093 33.2352 19.4315
(B6.5XFAD x BXD75)F1-ADtg f 21.125 3.0391 27.1022 15.1478
(B6.5XFAD x BXD75)F1-ADtg m 14.6667 3.5093 21.5685 7.7648
(B6.5XFAD x BXD75)F1-Ntg f 22.8889 2.8653 28.5242 17.2536
(B6.5XFAD x BXD75)F1-Ntg m 22.0 6.0783 33.9543 10.0457
(B6.5XFAD x BXD77)F1-ADtg f 24.0 3.5093 30.9018 17.0982
(B6.5XFAD x BXD77)F1-ADtg m 15.75 4.298 24.203 7.297
(B6.5XFAD x BXD77)F1-Ntg f 22.25 2.4815 27.1303 17.3697
(B6.5XFAD x BXD77)F1-Ntg m 20.5 3.0391 26.4772 14.5228
(B6.5XFAD x BXD87)F1-ADtg f 18.1667 2.4815 23.047 13.2863
(B6.5XFAD x BXD87)F1-ADtg m 23.8 3.8442 31.3606 16.2394
(B6.5XFAD x BXD87)F1-Ntg f 24.0 3.5093 30.9018 17.0982
(B6.5XFAD x BXD87)F1-Ntg m 23.25 4.298 31.703 14.797
(B6.5XFAD x BXD89)F1-Ntg f 38.5 6.0783 50.4543 26.5457
(B6.5XFAD x BXD89)F1-Ntg m 28.5 6.0783 40.4543 16.5457
(B6.5XFAD x D2)F1-ADtg f 32.4 2.2195 36.7651 28.0349
(B6.5XFAD x D2)F1-ADtg m 24.9231 2.3841 29.612 20.2342
(B6.5XFAD x D2)F1-Ntg f 26.4615 2.3841 31.1504 21.7727
(B6.5XFAD x D2)F1-Ntg m 31.6 2.7183 36.9461 26.2539


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 29.7115 2.1213 33.8835 25.5396
(B6.5XFAD x B6)F1-Ntg both 32.9833 1.8403 36.6027 29.364
(B6.5XFAD x BXD100)F1-ADtg both 11.5417 2.3212 16.1068 6.9765
(B6.5XFAD x BXD100)F1-Ntg both 16.4167 2.6026 21.5352 11.2981
(B6.5XFAD x BXD32)F1-ADtg both 31.3125 2.3212 35.8776 26.7474
(B6.5XFAD x BXD32)F1-Ntg both 29.375 3.0391 35.3522 23.3978
(B6.5XFAD x BXD44)F1-ADtg both 19.9071 1.7795 23.407 16.4073
(B6.5XFAD x BXD44)F1-Ntg both 26.25 3.7222 33.5705 18.9295
(B6.5XFAD x BXD56)F1-ADtg both 24.5833 3.9235 32.2998 16.8668
(B6.5XFAD x BXD60)F1-ADtg both 17.7 2.7183 23.0461 12.3539
(B6.5XFAD x BXD61)F1-ADtg both 18.375 2.5828 23.4546 13.2954
(B6.5XFAD x BXD61)F1-Ntg both 23.1875 2.3212 27.7526 18.6224
(B6.5XFAD x BXD62)F1-Ntg both 12.3333 3.5093 19.2352 5.4315
(B6.5XFAD x BXD65)F1-ADtg both 32.675 2.5427 37.6759 27.6741
(B6.5XFAD x BXD65)F1-Ntg both 37.3056 2.2652 41.7607 32.8504
(B6.5XFAD x BXD66)F1-ADtg both 14.6111 2.5828 19.6907 9.5315
(B6.5XFAD x BXD66)F1-Ntg both 17.75 3.596 24.8223 10.6777
(B6.5XFAD x BXD68)F1-ADtg both 20.6667 2.0885 24.7741 16.5593
(B6.5XFAD x BXD68)F1-Ntg both 25.4079 2.3644 30.058 20.7577
(B6.5XFAD x BXD69)F1-ADtg both 27.25 2.7743 32.7064 21.7936
(B6.5XFAD x BXD69)F1-Ntg both 26.4167 2.7743 31.873 20.9603
(B6.5XFAD x BXD75)F1-ADtg both 17.8958 2.3212 22.461 13.3307
(B6.5XFAD x BXD75)F1-Ntg both 22.4444 3.3599 29.0524 15.8364
(B6.5XFAD x BXD77)F1-ADtg both 19.875 2.7743 25.3314 14.4186
(B6.5XFAD x BXD77)F1-Ntg both 21.375 1.9618 25.2332 17.5168
(B6.5XFAD x BXD87)F1-ADtg both 20.9833 2.2878 25.4828 16.4839
(B6.5XFAD x BXD87)F1-Ntg both 23.625 2.7743 29.0814 18.1686
(B6.5XFAD x BXD89)F1-Ntg both 33.5 4.298 41.953 25.047
(B6.5XFAD x D2)F1-ADtg both 28.6615 1.6287 31.8646 25.4584
(B6.5XFAD x D2)F1-Ntg both 29.0308 1.8078 32.5863 25.4753




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA