Phenotype measure:   Neuner1   Ymaze_ent_2mo


  STRAIN COMPARISON PLOT
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Neuner1 - number of arm entries in Y-maze 2 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains12 strains
Mean of the strain means22.923   n 24.285   n
Median of the strain means24.0   n 25.25   n
SD of the strain means± 5.66 ± 8.3921
Coefficient of variation (CV)0.2469 0.3456
Min–max range of strain means15.0   –   32.0   n 11.0   –   44.0   n
Mean sample size per strain2.2   mice 2.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.6313 0.6313 0.0218 0.884
strain 4 623.3724 155.8431 5.3766 0.0033
sex:strain 4 272.2387 68.0597 2.3481 0.0845
Residuals 23 666.6667 28.9855


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x BXD100)F1-ADtg f 16.5 5.0662   4 2.5331 0.307 9.0, 20.0 -1.13
(B6.5XFAD x BXD100)F1-ADtg m 11.667 6.8069   3 3.9299 0.5834 4.0, 17.0 -1.5
(B6.5XFAD x BXD100)F1-Ntg f 18.0 8.4853   2   6.0 0.4714 12.0, 24.0 -0.87
(B6.5XFAD x BXD44)F1-ADtg f 25.0 0.0   1   0.0 0.0 25.0, 25.0 0.37
(B6.5XFAD x BXD44)F1-ADtg m 22.75 7.2284   4 3.6142 0.3177 16.0, 29.0 -0.18
(B6.5XFAD x BXD44)F1-Ntg m 26.0 0.0   1   0.0 0.0 26.0, 26.0 0.2
(B6.5XFAD x BXD60)F1-ADtg f 15.0 0.0   1   0.0 0.0 15.0, 15.0 -1.4
(B6.5XFAD x BXD60)F1-ADtg m 24.0 0.0   1   0.0 0.0 24.0, 24.0 -0.03
(B6.5XFAD x BXD60)F1-Ntg f 30.0 1.4142   2   1.0 0.0471 29.0, 31.0 1.25
(B6.5XFAD x BXD62)F1-Ntg f 19.0 0.0   1   0.0 0.0 19.0, 19.0 -0.69
(B6.5XFAD x BXD62)F1-Ntg m 11.0 0.0   1   0.0 0.0 11.0, 11.0 -1.58
(B6.5XFAD x BXD66)F1-ADtg f 24.5 2.1213   2   1.5 0.0866 23.0, 26.0 0.28
(B6.5XFAD x BXD66)F1-ADtg m 25.5 3.5355   2   2.5 0.1386 23.0, 28.0 0.14
(B6.5XFAD x BXD66)F1-Ntg f 28.0 0.0   1   0.0 0.0 28.0, 28.0 0.9
(B6.5XFAD x BXD66)F1-Ntg m 25.0 0.0   1   0.0 0.0 25.0, 25.0 0.09
(B6.5XFAD x BXD68)F1-ADtg f 22.0 4.2426   4 2.1213 0.1928 17.0, 26.0 -0.16
(B6.5XFAD x BXD68)F1-ADtg m 20.5 2.7386   6 1.118 0.1336 17.0, 25.0 -0.45
(B6.5XFAD x BXD68)F1-Ntg f 16.0 4.5461   4 2.273 0.2841 12.0, 22.0 -1.22
(B6.5XFAD x BXD68)F1-Ntg m 29.0 7.0711   2   5.0 0.2438 24.0, 34.0 0.56
(B6.5XFAD x BXD69)F1-ADtg f 28.0 8.4853   4 4.2426 0.303 16.0, 36.0 0.9
(B6.5XFAD x BXD69)F1-ADtg m 26.5 7.7782   2   5.5 0.2935 21.0, 32.0 0.26
(B6.5XFAD x BXD69)F1-Ntg f 24.0 0.0   1   0.0 0.0 24.0, 24.0 0.19
(B6.5XFAD x BXD75)F1-ADtg f 32.0 0.0   1   0.0 0.0 32.0, 32.0 1.6
(B6.5XFAD x BXD75)F1-ADtg m 25.5 3.5355   2   2.5 0.1386 23.0, 28.0 0.14
(B6.5XFAD x BXD75)F1-Ntg m 44.0 0.0   1   0.0 0.0 44.0, 44.0 2.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x BXD100)F1-ADtg f 16.5 2.6919 22.0686 10.9314
(B6.5XFAD x BXD100)F1-ADtg m 11.6667 3.1083 18.0968 5.2366
(B6.5XFAD x BXD66)F1-ADtg f 24.5 3.8069 32.3752 16.6248
(B6.5XFAD x BXD66)F1-ADtg m 25.5 3.8069 33.3752 17.6248
(B6.5XFAD x BXD68)F1-ADtg f 22.0 2.6919 27.5686 16.4314
(B6.5XFAD x BXD68)F1-ADtg m 20.5 2.1979 25.0468 15.9532
(B6.5XFAD x BXD68)F1-Ntg f 16.0 2.6919 21.5686 10.4314
(B6.5XFAD x BXD68)F1-Ntg m 29.0 3.8069 36.8752 21.1248
(B6.5XFAD x BXD69)F1-ADtg f 28.0 2.6919 33.5686 22.4314
(B6.5XFAD x BXD69)F1-ADtg m 26.5 3.8069 34.3752 18.6248


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x BXD100)F1-ADtg both 14.0833 2.056 18.3365 9.8302
(B6.5XFAD x BXD66)F1-ADtg both 25.0 2.6919 30.5686 19.4314
(B6.5XFAD x BXD68)F1-ADtg both 21.25 1.7376 24.8445 17.6555
(B6.5XFAD x BXD68)F1-Ntg both 22.5 2.3313 27.3226 17.6774
(B6.5XFAD x BXD69)F1-ADtg both 27.25 2.3313 32.0726 22.4274




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA