Phenotype measure:   Neuner1   Ymaze_dist_14mo


  STRAIN COMPARISON PLOT
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Neuner1 - distance traveled in Y-maze 14 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested48 strains35 strains
Mean of the strain means10.972   m 9.2524   m
Median of the strain means10.391   m 8.8624   m
SD of the strain means± 3.7286 ± 3.3442
Coefficient of variation (CV)0.3398 0.3614
Min–max range of strain means5.2148   –   20.313   m 3.4617   –   17.997   m
Mean sample size per strain4.3   mice 4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 157.0819 157.0819 8.3575 0.0043
strain 23 1589.6791 69.1165 3.6773 < 0.0001
sex:strain 23 516.9661 22.4768 1.1959 0.2521
Residuals 197 3702.6702 18.7953


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg m 12.693 4.9822   17 1.2084 0.3925 4.932, 25.134 1.03
(B6.5XFAD x B6)F1-Ntg f 16.719 5.0624   4 2.5312 0.3028 10.653, 21.372 1.54
(B6.5XFAD x B6)F1-Ntg m 11.54 3.3073   7 1.2501 0.2866 7.266, 17.64 0.68
(B6.5XFAD x BXD100)F1-ADtg f 8.286 0.0   1   0.0 0.0 8.286, 8.286 -0.72
(B6.5XFAD x BXD100)F1-ADtg m 5.2999 3.085   7 1.166 0.5821 1.666, 9.429 -1.18
(B6.5XFAD x BXD100)F1-Ntg f 6.9473 2.8757   4 1.4379 0.4139 4.482, 10.832 -1.08
(B6.5XFAD x BXD100)F1-Ntg m 7.9725 1.8368   6 0.74986 0.2304 5.192, 10.008 -0.38
(B6.5XFAD x BXD14)F1-ADtg f 12.775 3.9358   2   2.783 0.3081 9.992, 15.558 0.48
(B6.5XFAD x BXD14)F1-Ntg f 8.513 5.5777   2   3.944 0.6552 4.569, 12.457 -0.66
(B6.5XFAD x BXD16)F1-ADtg f 8.4917 6.1901   4 3.0951 0.729 3.667, 17.461 -0.67
(B6.5XFAD x BXD22)F1-ADtg f 12.576 11.317   2   8.002 0.8999 4.574, 20.578 0.43
(B6.5XFAD x BXD22)F1-Ntg f 8.0577 4.0173   3 2.3194 0.4986 3.556, 11.278 -0.78
(B6.5XFAD x BXD32)F1-ADtg f 8.88 1.5599   2   1.103 0.1757 7.777, 9.983 -0.56
(B6.5XFAD x BXD32)F1-ADtg m 10.455 3.6361   3 2.0993 0.3478 7.591, 14.546 0.36
(B6.5XFAD x BXD32)F1-Ntg f 13.545 1.4051   3 0.81125 0.1037 12.014, 14.776 0.69
(B6.5XFAD x BXD32)F1-Ntg m 14.307 2.1029   2   1.487 0.147 12.82, 15.794 1.51
(B6.5XFAD x BXD42)F1-ADtg f 5.7435 2.8051   2   1.9835 0.4884 3.76, 7.727 -1.4
(B6.5XFAD x BXD42)F1-Ntg f 8.167 0.0   1   0.0 0.0 8.167, 8.167 -0.75
(B6.5XFAD x BXD44)F1-ADtg f 8.1898 2.5955   13 0.71986 0.3169 4.959, 12.819 -0.75
(B6.5XFAD x BXD44)F1-ADtg m 8.0011 3.5257   8 1.2465 0.4407 2.657, 12.503 -0.37
(B6.5XFAD x BXD44)F1-Ntg f 8.001 0.0   1   0.0 0.0 8.001, 8.001 -0.8
(B6.5XFAD x BXD44)F1-Ntg m 9.131 0.79334   3 0.45803 0.0869 8.292, 9.869 -0.04
(B6.5XFAD x BXD51)F1-ADtg f 9.7737 3.3372   6 1.3624 0.3414 6.268, 15.59 -0.32
(B6.5XFAD x BXD51)F1-Ntg f 10.616 4.8018   4 2.4009 0.4523 5.755, 15.749 -0.1
(B6.5XFAD x BXD55)F1-ADtg f 20.313 2.475   4 1.2375 0.1218 17.143, 23.133 2.51
(B6.5XFAD x BXD55)F1-Ntg f 14.442 0.0   1   0.0 0.0 14.442, 14.442 0.93
(B6.5XFAD x BXD56)F1-ADtg m 11.236 4.647   3 2.6829 0.4136 6.056, 15.038 0.59
(B6.5XFAD x BXD56)F1-Ntg f 9.03 1.1639   2   0.823 0.1289 8.207, 9.853 -0.52
(B6.5XFAD x BXD56)F1-Ntg m 6.927 0.0   1   0.0 0.0 6.927, 6.927 -0.7
(B6.5XFAD x BXD60)F1-ADtg f 8.13 0.0   1   0.0 0.0 8.13, 8.13 -0.76
(B6.5XFAD x BXD60)F1-ADtg m 8.865 0.20067   3 0.11586 0.0226 8.692, 9.085 -0.12
(B6.5XFAD x BXD60)F1-Ntg f 9.812 0.0   1   0.0 0.0 9.812, 9.812 -0.31
(B6.5XFAD x BXD61)F1-ADtg f 15.013 14.14   4 7.0699 0.9418 4.258, 34.396 1.08
(B6.5XFAD x BXD61)F1-ADtg m 5.104 2.443   3 1.4105 0.4786 2.572, 7.447 -1.24
(B6.5XFAD x BXD61)F1-Ntg f 6.2978 2.6559   5 1.1877 0.4217 3.172, 9.949 -1.25
(B6.5XFAD x BXD61)F1-Ntg m 5.3134 0.97248   5 0.43491 0.183 4.528, 6.94 -1.18
(B6.5XFAD x BXD62)F1-ADtg f 11.706 3.9817   2   2.8155 0.3402 8.89, 14.521 0.2
(B6.5XFAD x BXD62)F1-ADtg m 4.3655 3.3708   2   2.3835 0.7721 1.982, 6.749 -1.46
(B6.5XFAD x BXD62)F1-Ntg f 7.2203 1.6478   3 0.95138 0.2282 6.252, 9.123 -1.01
(B6.5XFAD x BXD62)F1-Ntg m 3.4617 1.1972   3 0.69119 0.3458 2.211, 4.597 -1.73
(B6.5XFAD x BXD65)F1-ADtg f 12.738 4.5548   7 1.7216 0.3576 7.125, 20.803 0.47
(B6.5XFAD x BXD65)F1-ADtg m 11.848 1.265   2   0.8945 0.1068 10.953, 12.742 0.78
(B6.5XFAD x BXD65)F1-Ntg f 10.185 4.1308   8 1.4605 0.4056 4.181, 14.398 -0.21
(B6.5XFAD x BXD65)F1-Ntg m 13.311 2.7924   2   1.9745 0.2098 11.336, 15.285 1.21
(B6.5XFAD x BXD66)F1-ADtg f 9.1803 5.7275   3 3.3068 0.6239 4.465, 15.554 -0.48
(B6.5XFAD x BXD66)F1-ADtg m 6.8488 2.6744   4 1.3372 0.3905 3.753, 9.589 -0.72
(B6.5XFAD x BXD66)F1-Ntg f 11.288 0.0   1   0.0 0.0 11.288, 11.288 0.08
(B6.5XFAD x BXD66)F1-Ntg m 6.0065 0.04738   2   0.0335 0.0079 5.973, 6.04 -0.97
(B6.5XFAD x BXD68)F1-ADtg f 16.602 6.9913   3 4.0364 0.4211 12.027, 24.65 1.51
(B6.5XFAD x BXD68)F1-ADtg m 11.279 4.1793   7 1.5796 0.3705 5.686, 16.549 0.61
(B6.5XFAD x BXD68)F1-Ntg f 6.9068 1.4219   10 0.44966 0.2059 4.732, 8.814 -1.09
(B6.5XFAD x BXD68)F1-Ntg m 6.9755 3.4231   2   2.4205 0.4907 4.555, 9.396 -0.68
(B6.5XFAD x BXD69)F1-ADtg f 16.793 4.6855   6 1.9129 0.279 12.058, 21.464 1.56
(B6.5XFAD x BXD69)F1-ADtg m 8.8624 3.989   5 1.7839 0.4501 5.366, 14.51 -0.12
(B6.5XFAD x BXD69)F1-Ntg f 13.201 6.471   5 2.8939 0.4902 6.656, 23.16 0.6
(B6.5XFAD x BXD69)F1-Ntg m 13.746 5.7703   6 2.3557 0.4198 7.319, 23.689 1.34
(B6.5XFAD x BXD70)F1-ADtg f 5.401 0.0   1   0.0 0.0 5.401, 5.401 -1.49
(B6.5XFAD x BXD70)F1-ADtg m 9.3763 4.1344   3 2.387 0.4409 5.076, 13.322 0.04
(B6.5XFAD x BXD70)F1-Ntg f 18.767 0.55579   2   0.393 0.0296 18.374, 19.16 2.09
(B6.5XFAD x BXD70)F1-Ntg m 13.696 1.2898   2   0.912 0.0942 12.784, 14.608 1.33
(B6.5XFAD x BXD75)F1-ADtg f 10.608 5.5862   4 2.7931 0.5266 5.61, 18.461 -0.1
(B6.5XFAD x BXD75)F1-ADtg m 8.2248 4.5085   4 2.2542 0.5482 4.275, 14.692 -0.31
(B6.5XFAD x BXD75)F1-Ntg f 5.2148 2.0382   5 0.91152 0.3909 2.787, 7.914 -1.54
(B6.5XFAD x BXD75)F1-Ntg m 6.173 0.0   1   0.0 0.0 6.173, 6.173 -0.92
(B6.5XFAD x BXD77)F1-ADtg f 12.253 5.5561   4 2.778 0.4534 6.111, 17.43 0.34
(B6.5XFAD x BXD77)F1-ADtg m 8.0017 3.3303   3 1.9228 0.4162 4.618, 11.276 -0.37
(B6.5XFAD x BXD77)F1-Ntg f 9.6835 4.2711   10 1.3506 0.4411 4.255, 16.33 -0.35
(B6.5XFAD x BXD77)F1-Ntg m 6.6485 2.9738   6 1.2141 0.4473 2.665, 10.114 -0.78
(B6.5XFAD x BXD81)F1-ADtg f 18.234 1.5795   6 0.64481 0.0866 16.226, 20.598 1.95
(B6.5XFAD x BXD81)F1-Ntg f 16.893 7.1914   5 3.2161 0.4257 7.106, 27.254 1.59
(B6.5XFAD x BXD87)F1-ADtg f 10.597 3.6436   10 1.1522 0.3438 6.302, 18.281 -0.1
(B6.5XFAD x BXD87)F1-ADtg m 8.4082 1.0421   4 0.52104 0.1239 7.227, 9.733 -0.25
(B6.5XFAD x BXD87)F1-Ntg f 7.4503 2.0112   3 1.1612 0.27 5.749, 9.67 -0.94
(B6.5XFAD x BXD87)F1-Ntg m 6.904 0.0   1   0.0 0.0 6.904, 6.904 -0.7
(B6.5XFAD x BXD89)F1-ADtg m 14.206 0.0   1   0.0 0.0 14.206, 14.206 1.48
(B6.5XFAD x BXD89)F1-Ntg f 12.034 2.3045   2   1.6295 0.1915 10.405, 13.664 0.28
(B6.5XFAD x BXD89)F1-Ntg m 17.997 1.0048   2   0.7105 0.0558 17.287, 18.708 2.61
(B6.5XFAD x BXD99)F1-ADtg f 8.681 0.0   1   0.0 0.0 8.681, 8.681 -0.61
(B6.5XFAD x BXD99)F1-Ntg f 14.344 0.0   1   0.0 0.0 14.344, 14.344 0.9
(B6.5XFAD x D2)F1-ADtg f 11.462 5.8551   18 1.3801 0.5108 3.702, 28.906 0.13
(B6.5XFAD x D2)F1-ADtg m 10.76 5.3987   7 2.0405 0.5018 4.079, 17.258 0.45
(B6.5XFAD x D2)F1-Ntg f 10.887 3.5258   14 0.94231 0.3238 6.179, 16.687 -0.02
(B6.5XFAD x D2)F1-Ntg m 9.8908 2.9314   4 1.4657 0.2964 5.671, 12.04 0.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg f 16.7187 2.1677 20.9936 12.4439
(B6.5XFAD x B6)F1-Ntg m 11.5403 1.6386 14.7718 8.3088
(B6.5XFAD x BXD100)F1-Ntg f 6.9473 2.1677 11.2221 2.6724
(B6.5XFAD x BXD100)F1-Ntg m 7.9725 1.7699 11.4629 4.4821
(B6.5XFAD x BXD32)F1-ADtg f 8.88 3.0656 14.9255 2.8345
(B6.5XFAD x BXD32)F1-ADtg m 10.4553 2.503 15.3915 5.5192
(B6.5XFAD x BXD32)F1-Ntg f 13.5447 2.503 18.4808 8.6085
(B6.5XFAD x BXD32)F1-Ntg m 14.307 3.0656 20.3525 8.2615
(B6.5XFAD x BXD44)F1-ADtg f 8.1898 1.2024 10.5611 5.8186
(B6.5XFAD x BXD44)F1-ADtg m 8.0011 1.5328 11.0239 4.9784
(B6.5XFAD x BXD61)F1-ADtg f 15.0133 2.1677 19.2881 10.7384
(B6.5XFAD x BXD61)F1-ADtg m 5.104 2.503 10.0401 0.1679
(B6.5XFAD x BXD61)F1-Ntg f 6.2978 1.9388 10.1213 2.4743
(B6.5XFAD x BXD61)F1-Ntg m 5.3134 1.9388 9.1369 1.4899
(B6.5XFAD x BXD62)F1-ADtg f 11.7055 3.0656 17.751 5.66
(B6.5XFAD x BXD62)F1-ADtg m 4.3655 3.0656 10.411 -1.68
(B6.5XFAD x BXD62)F1-Ntg f 7.2203 2.503 12.1565 2.2842
(B6.5XFAD x BXD62)F1-Ntg m 3.4617 2.503 8.3978 -1.4745
(B6.5XFAD x BXD65)F1-ADtg f 12.7379 1.6386 15.9693 9.5064
(B6.5XFAD x BXD65)F1-ADtg m 11.8475 3.0656 17.893 5.802
(B6.5XFAD x BXD65)F1-Ntg f 10.1854 1.5328 13.2081 7.1626
(B6.5XFAD x BXD65)F1-Ntg m 13.3105 3.0656 19.356 7.265
(B6.5XFAD x BXD66)F1-ADtg f 9.1803 2.503 14.1165 4.2442
(B6.5XFAD x BXD66)F1-ADtg m 6.8488 2.1677 11.1236 2.5739
(B6.5XFAD x BXD68)F1-ADtg f 16.6023 2.503 21.5385 11.6662
(B6.5XFAD x BXD68)F1-ADtg m 11.2789 1.6386 14.5103 8.0474
(B6.5XFAD x BXD68)F1-Ntg f 6.9068 1.371 9.6104 4.2032
(B6.5XFAD x BXD68)F1-Ntg m 6.9755 3.0656 13.021 0.93
(B6.5XFAD x BXD69)F1-ADtg f 16.7927 1.7699 20.283 13.3023
(B6.5XFAD x BXD69)F1-ADtg m 8.8624 1.9388 12.6859 5.0389
(B6.5XFAD x BXD69)F1-Ntg f 13.201 1.9388 17.0245 9.3775
(B6.5XFAD x BXD69)F1-Ntg m 13.7457 1.7699 17.236 10.2553
(B6.5XFAD x BXD70)F1-Ntg f 18.767 3.0656 24.8125 12.7215
(B6.5XFAD x BXD70)F1-Ntg m 13.696 3.0656 19.7415 7.6505
(B6.5XFAD x BXD75)F1-ADtg f 10.6078 2.1677 14.8826 6.3329
(B6.5XFAD x BXD75)F1-ADtg m 8.2248 2.1677 12.4996 3.9499
(B6.5XFAD x BXD77)F1-ADtg f 12.2533 2.1677 16.5281 7.9784
(B6.5XFAD x BXD77)F1-ADtg m 8.0017 2.503 12.9378 3.0655
(B6.5XFAD x BXD77)F1-Ntg f 9.6835 1.371 12.3871 6.9799
(B6.5XFAD x BXD77)F1-Ntg m 6.6485 1.7699 10.1389 3.1581
(B6.5XFAD x BXD87)F1-ADtg f 10.5969 1.371 13.3005 7.8933
(B6.5XFAD x BXD87)F1-ADtg m 8.4082 2.1677 12.6831 4.1334
(B6.5XFAD x BXD89)F1-Ntg f 12.0345 3.0656 18.08 5.989
(B6.5XFAD x BXD89)F1-Ntg m 17.9975 3.0656 24.043 11.952
(B6.5XFAD x D2)F1-ADtg f 11.4621 1.0219 13.4772 9.4469
(B6.5XFAD x D2)F1-ADtg m 10.7596 1.6386 13.991 7.5281
(B6.5XFAD x D2)F1-Ntg f 10.8872 1.1587 13.1722 8.6022
(B6.5XFAD x D2)F1-Ntg m 9.8908 2.1677 14.1656 5.6159


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg both 14.1295 1.3587 16.8089 11.4501
(B6.5XFAD x BXD100)F1-Ntg both 7.4599 1.3992 10.2193 4.7005
(B6.5XFAD x BXD32)F1-ADtg both 9.6677 1.9788 13.57 5.7653
(B6.5XFAD x BXD32)F1-Ntg both 13.9258 1.9788 17.8282 10.0235
(B6.5XFAD x BXD44)F1-ADtg both 8.0955 0.9741 10.0164 6.1746
(B6.5XFAD x BXD61)F1-ADtg both 10.0586 1.6556 13.3236 6.7937
(B6.5XFAD x BXD61)F1-Ntg both 5.8056 1.371 8.5092 3.102
(B6.5XFAD x BXD62)F1-ADtg both 8.0355 2.1677 12.3103 3.7607
(B6.5XFAD x BXD62)F1-Ntg both 5.341 1.7699 8.8314 1.8506
(B6.5XFAD x BXD65)F1-ADtg both 12.2927 1.738 15.7202 8.8652
(B6.5XFAD x BXD65)F1-Ntg both 11.7479 1.7137 15.1275 8.3684
(B6.5XFAD x BXD66)F1-ADtg both 8.0145 1.6556 11.2795 4.7496
(B6.5XFAD x BXD68)F1-ADtg both 13.9406 1.4958 16.8905 10.9907
(B6.5XFAD x BXD68)F1-Ntg both 6.9412 1.6791 10.2524 3.6299
(B6.5XFAD x BXD69)F1-ADtg both 12.8275 1.3126 15.4161 10.239
(B6.5XFAD x BXD69)F1-Ntg both 13.4733 1.3126 16.0619 10.8848
(B6.5XFAD x BXD70)F1-Ntg both 16.2315 2.1677 20.5063 11.9567
(B6.5XFAD x BXD75)F1-ADtg both 9.4163 1.5328 12.439 6.3935
(B6.5XFAD x BXD77)F1-ADtg both 10.1275 1.6556 13.3924 6.8625
(B6.5XFAD x BXD77)F1-Ntg both 8.166 1.1194 10.3735 5.9585
(B6.5XFAD x BXD87)F1-ADtg both 9.5026 1.2824 12.0316 6.9736
(B6.5XFAD x BXD89)F1-Ntg both 15.016 2.1677 19.2908 10.7412
(B6.5XFAD x D2)F1-ADtg both 11.1108 0.9656 13.015 9.2067
(B6.5XFAD x D2)F1-Ntg both 10.389 1.229 12.8126 7.9654




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA