Phenotype measure:   Neuner1   Ymaze_dist_4mo


  STRAIN COMPARISON PLOT
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Neuner1 - distance traveled in Y-maze 4 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested52 strains31 strains
Mean of the strain means14.277   m 12.842   m
Median of the strain means14.013   m 12.753   m
SD of the strain means± 3.4557 ± 3.5773
Coefficient of variation (CV)0.242 0.2786
Min–max range of strain means8.469   –   21.849   m 5.9563   –   19.091   m
Mean sample size per strain6.3   mice 4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 47.8334 47.8334 3.8596 0.0505
strain 28 2981.8023 106.4929 8.5927 < 0.0001
sex:strain 28 516.5759 18.4491 1.4886 0.0585
Residuals 272 3371.0093 12.3934


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 21.557 6.321   5 2.8268 0.2932 15.807, 31.693 2.11
(B6.5XFAD x B6)F1-ADtg m 14.682 6.3524   7 2.401 0.4327 7.137, 25.807 0.51
(B6.5XFAD x B6)F1-Ntg f 20.457 5.2111   10 1.6479 0.2547 11.709, 27.428 1.79
(B6.5XFAD x B6)F1-Ntg m 19.091 5.8065   6 2.3705 0.3042 8.346, 24.342 1.75
(B6.5XFAD x BXD100)F1-ADtg f 10.772 2.9907   6 1.2209 0.2776 6.729, 14.937 -1.01
(B6.5XFAD x BXD100)F1-ADtg m 9.1693 1.4974   9 0.49912 0.1633 7.981, 12.75 -1.03
(B6.5XFAD x BXD100)F1-Ntg f 10.626 4.2903   6 1.7515 0.4037 4.161, 16.062 -1.06
(B6.5XFAD x BXD100)F1-Ntg m 11.198 4.5497   6 1.8574 0.4063 5.368, 18.342 -0.46
(B6.5XFAD x BXD14)F1-ADtg f 17.507 3.2778   9 1.0926 0.1872 13.391, 23.286 0.93
(B6.5XFAD x BXD14)F1-Ntg f 16.13 2.9397   4 1.4698 0.1822 12.653, 19.46 0.54
(B6.5XFAD x BXD16)F1-ADtg f 16.751 5.7295   8 2.0257 0.342 7.746, 24.912 0.72
(B6.5XFAD x BXD22)F1-ADtg f 16.226 0.12869   2   0.091 0.0079 16.135, 16.317 0.56
(B6.5XFAD x BXD22)F1-Ntg f 18.409 2.5897   4 1.2949 0.1407 16.135, 22.082 1.2
(B6.5XFAD x BXD2)F1-ADtg f 10.386 3.4496   8 1.2196 0.3321 4.963, 16.103 -1.13
(B6.5XFAD x BXD2)F1-Ntg f 14.189 5.1325   6 2.0953 0.3617 6.7, 20.115 -0.03
(B6.5XFAD x BXD32)F1-ADtg f 18.213 5.2367   8 1.8515 0.2875 13.663, 26.9 1.14
(B6.5XFAD x BXD32)F1-ADtg m 18.734 2.6119   6 1.0663 0.1394 15.512, 23.027 1.65
(B6.5XFAD x BXD32)F1-Ntg f 17.353 2.7777   4 1.3888 0.1601 14.949, 19.957 0.89
(B6.5XFAD x BXD32)F1-Ntg m 17.823 2.993   4 1.4965 0.1679 13.821, 20.285 1.39
(B6.5XFAD x BXD34)F1-ADtg f 8.7974 2.4173   10 0.76443 0.2748 4.977, 12.68 -1.59
(B6.5XFAD x BXD34)F1-Ntg f 8.8692 2.9661   12 0.85624 0.3344 3.78, 14.317 -1.57
(B6.5XFAD x BXD42)F1-ADtg f 14.501 4.5201   8 1.5981 0.3117 5.129, 19.823 0.06
(B6.5XFAD x BXD42)F1-Ntg f 13.629 3.302   5 1.4767 0.2423 11.01, 18.682 -0.19
(B6.5XFAD x BXD44)F1-ADtg f 9.3515 3.9409   11 1.1882 0.4214 4.899, 18.214 -1.43
(B6.5XFAD x BXD44)F1-ADtg m 11.346 3.4313   6 1.4008 0.3024 7.984, 16.351 -0.42
(B6.5XFAD x BXD44)F1-Ntg f 12.954 3.6854   2   2.606 0.2845 10.348, 15.56 -0.38
(B6.5XFAD x BXD44)F1-Ntg m 18.712 0.59114   2   0.418 0.0316 18.294, 19.13 1.64
(B6.5XFAD x BXD51)F1-ADtg f 13.291 3.3338   8 1.1787 0.2508 10.154, 18.181 -0.29
(B6.5XFAD x BXD51)F1-Ntg f 15.221 3.1573   7 1.1934 0.2074 11.25, 19.228 0.27
(B6.5XFAD x BXD55)F1-ADtg f 20.409 5.6299   10 1.7803 0.2759 12.304, 29.829 1.77
(B6.5XFAD x BXD55)F1-Ntg f 16.924 6.4131   6 2.6181 0.3789 6.355, 24.894 0.77
(B6.5XFAD x BXD56)F1-ADtg f 14.607 1.439   2   1.0175 0.0985 13.589, 15.624 0.1
(B6.5XFAD x BXD56)F1-Ntg f 17.156 0.35604   3 0.20556 0.0208 16.817, 17.527 0.83
(B6.5XFAD x BXD60)F1-ADtg f 15.285 1.2257   5 0.54813 0.0802 13.737, 16.721 0.29
(B6.5XFAD x BXD60)F1-ADtg m 12.292 3.8726   7 1.4637 0.315 7.582, 17.756 -0.15
(B6.5XFAD x BXD60)F1-Ntg f 18.213 3.8537   5 1.7234 0.2116 13.706, 23.785 1.14
(B6.5XFAD x BXD61)F1-ADtg f 12.086 2.4501   6 1.0002 0.2027 7.595, 14.919 -0.63
(B6.5XFAD x BXD61)F1-ADtg m 9.3165 1.5801   4 0.79005 0.1696 7.267, 10.724 -0.99
(B6.5XFAD x BXD61)F1-Ntg f 11.394 1.2529   3 0.72337 0.11 10.658, 12.841 -0.83
(B6.5XFAD x BXD61)F1-Ntg m 14.429 4.281   4 2.1405 0.2967 8.565, 18.632 0.44
(B6.5XFAD x BXD62)F1-ADtg f 9.589 0.0   1   0.0 0.0 9.589, 9.589 -1.36
(B6.5XFAD x BXD62)F1-ADtg m 8.713 5.4865   3 3.1676 0.6297 2.505, 12.911 -1.15
(B6.5XFAD x BXD62)F1-Ntg f 11.223 2.2652   3 1.3078 0.2018 8.61, 12.625 -0.88
(B6.5XFAD x BXD62)F1-Ntg m 5.9563 3.2256   4 1.6128 0.5416 1.195, 8.351 -1.92
(B6.5XFAD x BXD65)F1-ADtg f 14.505 3.2757   10 1.0359 0.2258 8.305, 18.31 0.07
(B6.5XFAD x BXD65)F1-ADtg m 13.662 3.97   4 1.985 0.2906 10.11, 19.122 0.23
(B6.5XFAD x BXD65)F1-Ntg f 13.999 4.6021   9 1.534 0.3287 4.703, 20.472 -0.08
(B6.5XFAD x BXD65)F1-Ntg m 17.375 2.743   6 1.1198 0.1579 13.283, 21.274 1.27
(B6.5XFAD x BXD66)F1-ADtg f 11.547 2.412   4 1.206 0.2089 8.115, 13.721 -0.79
(B6.5XFAD x BXD66)F1-ADtg m 8.8986 1.8244   9 0.60814 0.205 6.107, 11.18 -1.1
(B6.5XFAD x BXD66)F1-Ntg f 14.508 8.3622   2   5.913 0.5764 8.595, 20.421 0.07
(B6.5XFAD x BXD66)F1-Ntg m 13.175 2.5616   4 1.2808 0.1944 10.04, 15.645 0.09
(B6.5XFAD x BXD68)F1-ADtg f 11.981 1.6107   7 0.60878 0.1344 8.972, 13.876 -0.66
(B6.5XFAD x BXD68)F1-ADtg m 8.9916 2.6264   8 0.92856 0.2921 5.029, 11.926 -1.08
(B6.5XFAD x BXD68)F1-Ntg f 11.81 2.8177   18 0.66413 0.2386 6.922, 17.366 -0.71
(B6.5XFAD x BXD68)F1-Ntg m 12.258 2.8729   4 1.4364 0.2344 9.669, 15.742 -0.16
(B6.5XFAD x BXD69)F1-ADtg f 13.31 3.1987   6 1.3059 0.2403 8.089, 16.821 -0.28
(B6.5XFAD x BXD69)F1-ADtg m 12.753 3.4363   5 1.5368 0.2695 8.37, 16.464 -0.03
(B6.5XFAD x BXD69)F1-Ntg f 12.232 3.0934   3 1.786 0.2529 8.788, 14.774 -0.59
(B6.5XFAD x BXD69)F1-Ntg m 15.904 2.9256   3 1.6891 0.184 12.861, 18.696 0.86
(B6.5XFAD x BXD75)F1-ADtg f 10.077 2.906   5 1.2996 0.2884 5.569, 12.815 -1.22
(B6.5XFAD x BXD75)F1-ADtg m 10.529 2.0698   6 0.84499 0.1966 8.152, 12.942 -0.65
(B6.5XFAD x BXD75)F1-Ntg f 11.542 4.1831   8 1.4789 0.3624 6.374, 18.384 -0.79
(B6.5XFAD x BXD75)F1-Ntg m 13.418 0.77287   2   0.5465 0.0576 12.871, 13.964 0.16
(B6.5XFAD x BXD77)F1-ADtg f 8.469 0.71276   2   0.504 0.0842 7.965, 8.973 -1.68
(B6.5XFAD x BXD77)F1-ADtg m 9.2645 2.0626   2   1.4585 0.2226 7.806, 10.723 -1.0
(B6.5XFAD x BXD77)F1-Ntg f 11.757 4.4847   5 2.0056 0.3814 5.514, 17.783 -0.73
(B6.5XFAD x BXD77)F1-Ntg m 8.3157 1.062   4 0.53099 0.1277 6.839, 9.287 -1.27
(B6.5XFAD x BXD81)F1-ADtg f 17.295 6.1708   12 1.7814 0.3568 6.189, 26.936 0.87
(B6.5XFAD x BXD81)F1-Ntg f 21.849 3.386   8 1.1971 0.155 16.958, 26.947 2.19
(B6.5XFAD x BXD87)F1-ADtg f 12.346 3.1913   13 0.88509 0.2585 7.342, 19.438 -0.56
(B6.5XFAD x BXD87)F1-ADtg m 8.9585 4.1301   4 2.065 0.461 4.296, 12.818 -1.09
(B6.5XFAD x BXD87)F1-Ntg f 13.402 3.4264   6 1.3988 0.2557 7.726, 16.592 -0.25
(B6.5XFAD x BXD87)F1-Ntg m 11.87 2.8296   4 1.4148 0.2384 9.313, 15.916 -0.27
(B6.5XFAD x BXD89)F1-ADtg m 14.086 0.0   1   0.0 0.0 14.086, 14.086 0.35
(B6.5XFAD x BXD89)F1-Ntg f 18.987 1.451   2   1.026 0.0764 17.961, 20.013 1.36
(B6.5XFAD x BXD89)F1-Ntg m 17.356 3.9372   2   2.784 0.2268 14.572, 20.14 1.26
(B6.5XFAD x BXD99)F1-ADtg f 14.027 4.5655   4 2.2828 0.3255 9.736, 18.909 -0.07
(B6.5XFAD x BXD99)F1-Ntg f 19.141 0.0   1   0.0 0.0 19.141, 19.141 1.41
(B6.5XFAD x D2)F1-ADtg f 15.024 2.0182   10 0.63822 0.1343 12.082, 17.673 0.22
(B6.5XFAD x D2)F1-ADtg m 13.831 4.162   7 1.5731 0.3009 9.945, 21.157 0.28
(B6.5XFAD x D2)F1-Ntg f 12.544 2.303   7 0.87045 0.1836 9.753, 16.116 -0.5
(B6.5XFAD x D2)F1-Ntg m 16.009 1.0928   5 0.48873 0.0683 14.772, 17.367 0.89


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 21.5572 1.5744 24.6567 18.4577
(B6.5XFAD x B6)F1-ADtg m 14.6816 1.3306 17.3011 12.062
(B6.5XFAD x B6)F1-Ntg f 20.457 1.1133 22.6487 18.2653
(B6.5XFAD x B6)F1-Ntg m 19.0908 1.4372 21.9203 16.2614
(B6.5XFAD x BXD100)F1-ADtg f 10.7723 1.4372 13.6018 7.9429
(B6.5XFAD x BXD100)F1-ADtg m 9.1693 1.1735 11.4796 6.8591
(B6.5XFAD x BXD100)F1-Ntg f 10.6263 1.4372 13.4558 7.7969
(B6.5XFAD x BXD100)F1-Ntg m 11.1982 1.4372 14.0276 8.3687
(B6.5XFAD x BXD32)F1-ADtg f 18.2126 1.2447 20.663 15.7622
(B6.5XFAD x BXD32)F1-ADtg m 18.7343 1.4372 21.5638 15.9049
(B6.5XFAD x BXD32)F1-Ntg f 17.3527 1.7602 20.8181 13.8874
(B6.5XFAD x BXD32)F1-Ntg m 17.8235 1.7602 21.2889 14.3581
(B6.5XFAD x BXD44)F1-ADtg f 9.3515 1.0614 11.4412 7.2618
(B6.5XFAD x BXD44)F1-ADtg m 11.3462 1.4372 14.1756 8.5167
(B6.5XFAD x BXD44)F1-Ntg f 12.954 2.4893 17.8548 8.0532
(B6.5XFAD x BXD44)F1-Ntg m 18.712 2.4893 23.6128 13.8112
(B6.5XFAD x BXD60)F1-ADtg f 15.2848 1.5744 18.3843 12.1853
(B6.5XFAD x BXD60)F1-ADtg m 12.292 1.3306 14.9116 9.6724
(B6.5XFAD x BXD61)F1-ADtg f 12.0863 1.4372 14.9158 9.2569
(B6.5XFAD x BXD61)F1-ADtg m 9.3165 1.7602 12.7819 5.8511
(B6.5XFAD x BXD61)F1-Ntg f 11.3943 2.0325 15.3958 7.3929
(B6.5XFAD x BXD61)F1-Ntg m 14.4288 1.7602 17.8941 10.9634
(B6.5XFAD x BXD62)F1-Ntg f 11.2233 2.0325 15.2248 7.2219
(B6.5XFAD x BXD62)F1-Ntg m 5.9562 1.7602 9.4216 2.4909
(B6.5XFAD x BXD65)F1-ADtg f 14.5054 1.1133 16.6971 12.3137
(B6.5XFAD x BXD65)F1-ADtg m 13.6617 1.7602 17.1271 10.1964
(B6.5XFAD x BXD65)F1-Ntg f 13.999 1.1735 16.3093 11.6887
(B6.5XFAD x BXD65)F1-Ntg m 17.3753 1.4372 20.2048 14.5459
(B6.5XFAD x BXD66)F1-ADtg f 11.5472 1.7602 15.0126 8.0819
(B6.5XFAD x BXD66)F1-ADtg m 8.8986 1.1735 11.2088 6.5883
(B6.5XFAD x BXD66)F1-Ntg f 14.508 2.4893 19.4088 9.6072
(B6.5XFAD x BXD66)F1-Ntg m 13.175 1.7602 16.6404 9.7096
(B6.5XFAD x BXD68)F1-ADtg f 11.9814 1.3306 14.601 9.3619
(B6.5XFAD x BXD68)F1-ADtg m 8.9916 1.2447 11.442 6.5412
(B6.5XFAD x BXD68)F1-Ntg f 11.8101 0.8298 13.4436 10.1765
(B6.5XFAD x BXD68)F1-Ntg m 12.2577 1.7602 15.7231 8.7924
(B6.5XFAD x BXD69)F1-ADtg f 13.3105 1.4372 16.14 10.481
(B6.5XFAD x BXD69)F1-ADtg m 12.7528 1.5744 15.8523 9.6533
(B6.5XFAD x BXD69)F1-Ntg f 12.2323 2.0325 16.2338 8.2309
(B6.5XFAD x BXD69)F1-Ntg m 15.9043 2.0325 19.9058 11.9029
(B6.5XFAD x BXD75)F1-ADtg f 10.0766 1.5744 13.1761 6.9771
(B6.5XFAD x BXD75)F1-ADtg m 10.529 1.4372 13.3585 7.6995
(B6.5XFAD x BXD75)F1-Ntg f 11.542 1.2447 13.9924 9.0916
(B6.5XFAD x BXD75)F1-Ntg m 13.4175 2.4893 18.3183 8.5167
(B6.5XFAD x BXD77)F1-ADtg f 8.469 2.4893 13.3698 3.5682
(B6.5XFAD x BXD77)F1-ADtg m 9.2645 2.4893 14.1653 4.3637
(B6.5XFAD x BXD77)F1-Ntg f 11.757 1.5744 14.8565 8.6575
(B6.5XFAD x BXD77)F1-Ntg m 8.3157 1.7602 11.7811 4.8504
(B6.5XFAD x BXD87)F1-ADtg f 12.346 0.9764 14.2682 10.4238
(B6.5XFAD x BXD87)F1-ADtg m 8.9585 1.7602 12.4239 5.4931
(B6.5XFAD x BXD87)F1-Ntg f 13.4023 1.4372 16.2318 10.5729
(B6.5XFAD x BXD87)F1-Ntg m 11.8705 1.7602 15.3359 8.4051
(B6.5XFAD x BXD89)F1-Ntg f 18.987 2.4893 23.8878 14.0862
(B6.5XFAD x BXD89)F1-Ntg m 17.356 2.4893 22.2568 12.4552
(B6.5XFAD x D2)F1-ADtg f 15.0245 1.1133 17.2162 12.8328
(B6.5XFAD x D2)F1-ADtg m 13.831 1.3306 16.4506 11.2114
(B6.5XFAD x D2)F1-Ntg f 12.5444 1.3306 15.164 9.9249
(B6.5XFAD x D2)F1-Ntg m 16.009 1.5744 19.1085 12.9095


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 18.1194 1.0307 20.1485 16.0903
(B6.5XFAD x B6)F1-Ntg both 19.7739 0.909 21.5634 17.9844
(B6.5XFAD x BXD100)F1-ADtg both 9.9708 0.9277 11.7972 8.1444
(B6.5XFAD x BXD100)F1-Ntg both 10.9122 1.0163 12.913 8.9115
(B6.5XFAD x BXD32)F1-ADtg both 18.4735 0.9506 20.345 16.602
(B6.5XFAD x BXD32)F1-Ntg both 17.5881 1.2447 20.0385 15.1377
(B6.5XFAD x BXD44)F1-ADtg both 10.3489 0.8933 12.1076 8.5901
(B6.5XFAD x BXD44)F1-Ntg both 15.833 1.7602 19.2984 12.3676
(B6.5XFAD x BXD60)F1-ADtg both 13.7884 1.0307 15.8175 11.7593
(B6.5XFAD x BXD61)F1-ADtg both 10.7014 1.1362 12.9383 8.4645
(B6.5XFAD x BXD61)F1-Ntg both 12.9115 1.3444 15.5583 10.2648
(B6.5XFAD x BXD62)F1-Ntg both 8.5898 1.3444 11.2365 5.9431
(B6.5XFAD x BXD65)F1-ADtg both 14.0836 1.0414 16.1337 12.0334
(B6.5XFAD x BXD65)F1-Ntg both 15.6872 0.9277 17.5136 13.8608
(B6.5XFAD x BXD66)F1-ADtg both 10.2229 1.0578 12.3053 8.1405
(B6.5XFAD x BXD66)F1-Ntg both 13.8415 1.5244 16.8426 10.8404
(B6.5XFAD x BXD68)F1-ADtg both 10.4865 0.911 12.28 8.693
(B6.5XFAD x BXD68)F1-Ntg both 12.0339 0.973 13.9495 10.1183
(B6.5XFAD x BXD69)F1-ADtg both 13.0316 1.0659 15.13 10.9333
(B6.5XFAD x BXD69)F1-Ntg both 14.0683 1.4372 16.8978 11.2389
(B6.5XFAD x BXD75)F1-ADtg both 10.3028 1.0659 12.4012 8.2044
(B6.5XFAD x BXD75)F1-Ntg both 12.4797 1.3916 15.2194 9.7401
(B6.5XFAD x BXD77)F1-ADtg both 8.8667 1.7602 12.3321 5.4014
(B6.5XFAD x BXD77)F1-Ntg both 10.0364 1.1808 12.361 7.7117
(B6.5XFAD x BXD87)F1-ADtg both 10.6522 1.0064 12.6337 8.6708
(B6.5XFAD x BXD87)F1-Ntg both 12.6364 1.1362 14.8733 10.3995
(B6.5XFAD x BXD89)F1-Ntg both 18.1715 1.7602 21.6369 14.7061
(B6.5XFAD x D2)F1-ADtg both 14.4277 0.8674 16.1355 12.72
(B6.5XFAD x D2)F1-Ntg both 14.2767 1.0307 16.3058 12.2476




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA