Phenotype measure:   Neuner1   Ymaze_spon_alt_16mo

ID, description, units MPD:65920   Ymaze_spon_alt_16mo   percentage spontaneous alternation in Y-maze   [%]  16 mo
Data set, strains Neuner1   F1 AD-BXD   16 strains     sex: both     age: 7-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage spontaneous alternation in Y-maze 16 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains12 strains
Mean of the strain means56.01   % 53.19   %
Median of the strain means55.67   % 54.43   %
SD of the strain means± 11.749 ± 6.4996
Coefficient of variation (CV)0.2098 0.1222
Min–max range of strain means39.0   –   80.0   % 40.0   –   64.5   %
Mean sample size per strain2.8   mice 4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 266.5135 266.5135 1.3275 0.2581
strain 5 459.1665 91.8333 0.4574 0.8047
sex:strain 5 1109.232 221.8464 1.105 0.3778
Residuals 31 6223.7857 200.7673


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 63.0 0.0   1   0.0 0.0 63.0, 63.0 0.59
(B6.5XFAD x B6)F1-ADtg m 57.45 15.88   22 3.3856 0.2764 33.0, 100.0 0.65
(B6.5XFAD x B6)F1-Ntg f 63.29 6.1296   7 2.3168 0.0969 55.0, 75.0 0.62
(B6.5XFAD x B6)F1-Ntg m 54.86 11.81   7 4.4638 0.2153 36.0, 69.0 0.26
(B6.5XFAD x BXD44)F1-ADtg f 55.67 7.3711   3 4.2557 0.1324 50.0, 64.0 -0.03
(B6.5XFAD x BXD44)F1-ADtg m 64.5 18.664   4 9.3318 0.2894 44.0, 86.0 1.74
(B6.5XFAD x BXD44)F1-Ntg m 56.0 5.6569   2   4.0 0.101 52.0, 60.0 0.43
(B6.5XFAD x BXD61)F1-ADtg f 40.2 7.6289   5 3.4117 0.1898 29.0, 50.0 -1.35
(B6.5XFAD x BXD61)F1-ADtg m 40.0 0.0   1   0.0 0.0 40.0, 40.0 -2.03
(B6.5XFAD x BXD61)F1-Ntg f 55.0 15.133   3 8.7369 0.2751 38.0, 67.0 -0.09
(B6.5XFAD x BXD61)F1-Ntg m 54.0 14.422   3 8.3267 0.2671 42.0, 70.0 0.12
(B6.5XFAD x BXD62)F1-ADtg f 46.5 14.849   2   10.5 0.3193 36.0, 57.0 -0.81
(B6.5XFAD x BXD62)F1-Ntg f 54.0 0.0   1   0.0 0.0 54.0, 54.0 -0.17
(B6.5XFAD x BXD69)F1-ADtg f 80.0 0.0   1   0.0 0.0 80.0, 80.0 2.04
(B6.5XFAD x BXD69)F1-ADtg m 48.5 6.364   2   4.5 0.1312 44.0, 53.0 -0.72
(B6.5XFAD x BXD69)F1-Ntg f 59.0 1.4142   2   1.0 0.024 58.0, 60.0 0.25
(B6.5XFAD x BXD69)F1-Ntg m 47.0 4.2426   2   3.0 0.0903 44.0, 50.0 -0.95
(B6.5XFAD x BXD70)F1-ADtg m 51.67 24.947   3 14.403 0.4828 33.0, 80.0 -0.23
(B6.5XFAD x BXD70)F1-Ntg f 45.5 12.021   2   8.5 0.2642 37.0, 54.0 -0.89
(B6.5XFAD x BXD70)F1-Ntg m 55.5 10.607   2   7.5 0.1911 48.0, 63.0 0.35
(B6.5XFAD x BXD77)F1-ADtg f 39.0 55.15   2   39.0 1.4142 -1.45
(B6.5XFAD x BXD77)F1-Ntg f 56.0 10.932   5 4.8888 0.1952 43.0, 71.0 0.0
(B6.5XFAD x D2)F1-ADtg f 71.0 41.012   2   29.0 0.5776 42.0, 100.0 1.28
(B6.5XFAD x D2)F1-ADtg m 48.833 15.329   6 6.2579 0.3139 32.0, 65.0 -0.67
(B6.5XFAD x D2)F1-Ntg m 60.0 2.0   3 1.1547 0.0333 58.0, 62.0 1.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg f 63.2857 5.3555 74.2083 52.3632
(B6.5XFAD x B6)F1-Ntg m 54.8571 5.3555 65.7797 43.9346
(B6.5XFAD x BXD44)F1-ADtg f 55.6667 8.1806 72.3511 38.9822
(B6.5XFAD x BXD44)F1-ADtg m 64.5 7.0846 78.9492 50.0508
(B6.5XFAD x BXD61)F1-Ntg f 55.0 8.1806 71.6845 38.3155
(B6.5XFAD x BXD61)F1-Ntg m 54.0 8.1806 70.6845 37.3155
(B6.5XFAD x BXD69)F1-Ntg f 59.0 10.0192 79.4342 38.5658
(B6.5XFAD x BXD69)F1-Ntg m 47.0 10.0192 67.4342 26.5658
(B6.5XFAD x BXD70)F1-Ntg f 45.5 10.0192 65.9342 25.0658
(B6.5XFAD x BXD70)F1-Ntg m 55.5 10.0192 75.9342 35.0658
(B6.5XFAD x D2)F1-ADtg f 71.0 10.0192 91.4342 50.5658
(B6.5XFAD x D2)F1-ADtg m 48.8333 5.7846 60.631 37.0356


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg both 59.0714 3.7869 66.7948 51.348
(B6.5XFAD x BXD44)F1-ADtg both 60.0833 5.411 71.1191 49.0476
(B6.5XFAD x BXD61)F1-Ntg both 54.5 5.7846 66.2977 42.7023
(B6.5XFAD x BXD69)F1-Ntg both 53.0 7.0846 67.4492 38.5508
(B6.5XFAD x BXD70)F1-Ntg both 50.5 7.0846 64.9492 36.0508
(B6.5XFAD x D2)F1-ADtg both 59.9167 5.7846 71.7144 48.119




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA