Phenotype measure:   Neuner1   Ymaze_spon_alt_14mo

ID, description, units MPD:65919   Ymaze_spon_alt_14mo   percentage spontaneous alternation in Y-maze   [%]  14 mo
Data set, strains Neuner1   F1 AD-BXD   51 strains     sex: both     age: 7-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage spontaneous alternation in Y-maze 14 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested48 strains35 strains
Mean of the strain means54.04   % 54.32   %
Median of the strain means52.67   % 53.67   %
SD of the strain means± 8.1813 ± 9.4576
Coefficient of variation (CV)0.1514 0.1741
Min–max range of strain means39.667   –   75.0   % 32.0   –   77.5   %
Mean sample size per strain4.3   mice 4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 704.2197 704.2197 4.631 0.0326
strain 23 3771.1681 163.9638 1.0782 0.3724
sex:strain 23 5582.189 242.7039 1.596 0.0473
Residuals 197 29957.2233 152.0671


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg m 51.59 12.125   17 2.9407 0.235 27.0, 68.0 -0.29
(B6.5XFAD x B6)F1-Ntg f 58.0 10.132   4 5.0662 0.1747 51.0, 73.0 0.48
(B6.5XFAD x B6)F1-Ntg m 61.57 11.774   7 4.45 0.1912 46.0, 79.0 0.77
(B6.5XFAD x BXD100)F1-ADtg f 73.0 0.0   1   0.0 0.0 73.0, 73.0 2.32
(B6.5XFAD x BXD100)F1-ADtg m 45.286 13.622   7 5.1488 0.3008 20.0, 63.0 -0.96
(B6.5XFAD x BXD100)F1-Ntg f 58.75 10.112   4 5.0559 0.1721 50.0, 68.0 0.58
(B6.5XFAD x BXD100)F1-Ntg m 53.67 5.6451   6 2.3046 0.1052 47.0, 63.0 -0.07
(B6.5XFAD x BXD14)F1-ADtg f 51.5 19.092   2   13.5 0.3707 38.0, 65.0 -0.31
(B6.5XFAD x BXD14)F1-Ntg f 42.0 1.4142   2   1.0 0.0337 41.0, 43.0 -1.47
(B6.5XFAD x BXD16)F1-ADtg f 57.0 12.463   4 6.2316 0.2187 43.0, 68.0 0.36
(B6.5XFAD x BXD22)F1-ADtg f 49.0 8.4853   2   6.0 0.1732 43.0, 55.0 -0.62
(B6.5XFAD x BXD22)F1-Ntg f 39.667 20.526   3 11.851 0.5175 17.0, 57.0 -1.76
(B6.5XFAD x BXD32)F1-ADtg f 48.5 21.92   2   15.5 0.452 33.0, 64.0 -0.68
(B6.5XFAD x BXD32)F1-ADtg m 51.33 16.01   3 9.2436 0.3119 35.0, 67.0 -0.32
(B6.5XFAD x BXD32)F1-Ntg f 48.667 9.4516   3 5.4569 0.1942 38.0, 56.0 -0.66
(B6.5XFAD x BXD32)F1-Ntg m 42.5 9.1924   2   6.5 0.2163 36.0, 49.0 -1.25
(B6.5XFAD x BXD42)F1-ADtg f 73.0 18.385   2   13.0 0.2518 60.0, 86.0 2.32
(B6.5XFAD x BXD42)F1-Ntg f 43.0 0.0   1   0.0 0.0 43.0, 43.0 -1.35
(B6.5XFAD x BXD44)F1-ADtg f 57.15 11.364   13 3.1518 0.1988 33.0, 75.0 0.38
(B6.5XFAD x BXD44)F1-ADtg m 61.38 15.784   8 5.5804 0.2572 40.0, 86.0 0.75
(B6.5XFAD x BXD44)F1-Ntg f 75.0 0.0   1   0.0 0.0 75.0, 75.0 2.56
(B6.5XFAD x BXD44)F1-Ntg m 62.0 12.288   3 7.0946 0.1982 53.0, 76.0 0.81
(B6.5XFAD x BXD51)F1-ADtg f 44.167 13.586   6 5.5463 0.3076 29.0, 59.0 -1.21
(B6.5XFAD x BXD51)F1-Ntg f 52.75 14.751   4 7.3754 0.2796 33.0, 65.0 -0.16
(B6.5XFAD x BXD55)F1-ADtg f 50.25 12.366   4 6.183 0.2461 33.0, 61.0 -0.46
(B6.5XFAD x BXD55)F1-Ntg f 45.0 0.0   1   0.0 0.0 45.0, 45.0 -1.11
(B6.5XFAD x BXD56)F1-ADtg m 48.333 30.616   3 17.676 0.6334 13.0, 67.0 -0.63
(B6.5XFAD x BXD56)F1-Ntg f 62.5 2.1213   2   1.5 0.0339 61.0, 64.0 1.03
(B6.5XFAD x BXD56)F1-Ntg m 69.0 0.0   1   0.0 0.0 69.0, 69.0 1.55
(B6.5XFAD x BXD60)F1-ADtg f 53.0 0.0   1   0.0 0.0 53.0, 53.0 -0.13
(B6.5XFAD x BXD60)F1-ADtg m 42.0 8.8882   3 5.1316 0.2116 35.0, 52.0 -1.3
(B6.5XFAD x BXD60)F1-Ntg f 55.0 0.0   1   0.0 0.0 55.0, 55.0 0.12
(B6.5XFAD x BXD61)F1-ADtg f 61.5 15.759   4 7.8793 0.2562 43.0, 80.0 0.91
(B6.5XFAD x BXD61)F1-ADtg m 60.33 9.0738   3 5.2387 0.1504 50.0, 67.0 0.64
(B6.5XFAD x BXD61)F1-Ntg f 59.4 19.334   5 8.6464 0.3255 38.0, 90.0 0.65
(B6.5XFAD x BXD61)F1-Ntg m 49.8 14.957   5 6.6888 0.3003 36.0, 75.0 -0.48
(B6.5XFAD x BXD62)F1-ADtg f 50.0 0.0   2   0.0 0.0 50.0, 50.0 -0.49
(B6.5XFAD x BXD62)F1-ADtg m 38.0 16.971   2   12.0 0.4466 26.0, 50.0 -1.73
(B6.5XFAD x BXD62)F1-Ntg f 40.0 13.0   3 7.5056 0.325 27.0, 53.0 -1.72
(B6.5XFAD x BXD62)F1-Ntg m 51.67 7.6376   3 4.4096 0.1478 45.0, 60.0 -0.28
(B6.5XFAD x BXD65)F1-ADtg f 51.14 8.1941   7 3.0971 0.1602 35.0, 59.0 -0.35
(B6.5XFAD x BXD65)F1-ADtg m 55.5 2.1213   2   1.5 0.0382 54.0, 57.0 0.12
(B6.5XFAD x BXD65)F1-Ntg f 51.38 8.3313   8 2.9456 0.1622 33.0, 60.0 -0.33
(B6.5XFAD x BXD65)F1-Ntg m 61.0 9.8995   2   7.0 0.1623 54.0, 68.0 0.71
(B6.5XFAD x BXD66)F1-ADtg f 54.67 14.434   3 8.3333 0.264 38.0, 63.0 0.08
(B6.5XFAD x BXD66)F1-ADtg m 63.75 25.171   4 12.586 0.3948 44.0, 100.0 1.0
(B6.5XFAD x BXD66)F1-Ntg f 52.0 0.0   1   0.0 0.0 52.0, 52.0 -0.25
(B6.5XFAD x BXD66)F1-Ntg m 44.0 18.385   2   13.0 0.4178 31.0, 57.0 -1.09
(B6.5XFAD x BXD68)F1-ADtg f 65.0 6.245   3 3.6056 0.0961 58.0, 70.0 1.34
(B6.5XFAD x BXD68)F1-ADtg m 59.14 15.236   7 5.7588 0.2576 33.0, 76.0 0.51
(B6.5XFAD x BXD68)F1-Ntg f 52.6 10.33   10 3.2667 0.1964 33.0, 71.0 -0.18
(B6.5XFAD x BXD68)F1-Ntg m 77.5 14.849   2   10.5 0.1916 67.0, 88.0 2.45
(B6.5XFAD x BXD69)F1-ADtg f 51.33 9.288   6 3.7918 0.1809 38.0, 64.0 -0.33
(B6.5XFAD x BXD69)F1-ADtg m 48.6 11.524   5 5.1536 0.2371 33.0, 60.0 -0.61
(B6.5XFAD x BXD69)F1-Ntg f 59.4 16.242   5 7.2636 0.2734 50.0, 88.0 0.65
(B6.5XFAD x BXD69)F1-Ntg m 53.5 5.648   6 2.3058 0.1056 44.0, 59.0 -0.09
(B6.5XFAD x BXD70)F1-ADtg f 60.0 0.0   1   0.0 0.0 60.0, 60.0 0.73
(B6.5XFAD x BXD70)F1-ADtg m 56.0 15.1   3 8.7178 0.2696 40.0, 70.0 0.18
(B6.5XFAD x BXD70)F1-Ntg f 65.5 17.678   2   12.5 0.2699 53.0, 78.0 1.4
(B6.5XFAD x BXD70)F1-Ntg m 58.0 4.2426   2   3.0 0.0731 55.0, 61.0 0.39
(B6.5XFAD x BXD75)F1-ADtg f 44.0 8.5245   4 4.2622 0.1937 37.0, 56.0 -1.23
(B6.5XFAD x BXD75)F1-ADtg m 67.5 10.083   4 5.0415 0.1494 54.0, 78.0 1.39
(B6.5XFAD x BXD75)F1-Ntg f 43.0 28.888   5 12.919 0.6718 -1.35
(B6.5XFAD x BXD75)F1-Ntg m 54.0 0.0   1   0.0 0.0 54.0, 54.0 -0.03
(B6.5XFAD x BXD77)F1-ADtg f 58.25 7.4106   4 3.7053 0.1272 50.0, 65.0 0.51
(B6.5XFAD x BXD77)F1-ADtg m 56.33 0.57735   3 0.33333 0.0102 56.0, 57.0 0.21
(B6.5XFAD x BXD77)F1-Ntg f 56.5 9.7781   10 3.0921 0.1731 39.0, 69.0 0.3
(B6.5XFAD x BXD77)F1-Ntg m 51.5 16.022   6 6.5409 0.3111 31.0, 71.0 -0.3
(B6.5XFAD x BXD81)F1-ADtg f 48.667 4.8028   6 1.9607 0.0987 41.0, 54.0 -0.66
(B6.5XFAD x BXD81)F1-Ntg f 56.2 4.5497   5 2.0347 0.081 51.0, 63.0 0.26
(B6.5XFAD x BXD87)F1-ADtg f 52.2 9.5661   10 3.0251 0.1833 43.0, 73.0 -0.23
(B6.5XFAD x BXD87)F1-ADtg m 48.25 13.889   4 6.9447 0.2879 31.0, 63.0 -0.64
(B6.5XFAD x BXD87)F1-Ntg f 55.33 9.0738   3 5.2387 0.164 45.0, 62.0 0.16
(B6.5XFAD x BXD87)F1-Ntg m 47.0 0.0   1   0.0 0.0 47.0, 47.0 -0.77
(B6.5XFAD x BXD89)F1-ADtg m 32.0 0.0   1   0.0 0.0 32.0, 32.0 -2.36
(B6.5XFAD x BXD89)F1-Ntg f 65.0 12.728   2   9.0 0.1958 56.0, 74.0 1.34
(B6.5XFAD x BXD89)F1-Ntg m 49.0 1.4142   2   1.0 0.0289 48.0, 50.0 -0.56
(B6.5XFAD x BXD99)F1-ADtg f 53.0 0.0   1   0.0 0.0 53.0, 53.0 -0.13
(B6.5XFAD x BXD99)F1-Ntg f 52.0 0.0   1   0.0 0.0 52.0, 52.0 -0.25
(B6.5XFAD x D2)F1-ADtg f 50.83 13.479   18 3.177 0.2652 17.0, 76.0 -0.39
(B6.5XFAD x D2)F1-ADtg m 68.29 19.721   7 7.4537 0.2888 42.0, 100.0 1.48
(B6.5XFAD x D2)F1-Ntg f 48.214 10.438   14 2.7897 0.2165 36.0, 67.0 -0.71
(B6.5XFAD x D2)F1-Ntg m 62.0 4.2426   4 2.1213 0.0684 58.0, 67.0 0.81


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg f 58.0 6.1658 70.1594 45.8406
(B6.5XFAD x B6)F1-Ntg m 61.5714 4.6609 70.7631 52.3798
(B6.5XFAD x BXD100)F1-Ntg f 58.75 6.1658 70.9094 46.5906
(B6.5XFAD x BXD100)F1-Ntg m 53.6667 5.0343 63.5948 43.7386
(B6.5XFAD x BXD32)F1-ADtg f 48.5 8.7197 65.696 31.304
(B6.5XFAD x BXD32)F1-ADtg m 51.3333 7.1196 65.3738 37.2929
(B6.5XFAD x BXD32)F1-Ntg f 48.6667 7.1196 62.7071 34.6262
(B6.5XFAD x BXD32)F1-Ntg m 42.5 8.7197 59.696 25.304
(B6.5XFAD x BXD44)F1-ADtg f 57.1538 3.4202 63.8987 50.409
(B6.5XFAD x BXD44)F1-ADtg m 61.375 4.3599 69.973 52.777
(B6.5XFAD x BXD61)F1-ADtg f 61.5 6.1658 73.6594 49.3406
(B6.5XFAD x BXD61)F1-ADtg m 60.3333 7.1196 74.3738 46.2929
(B6.5XFAD x BXD61)F1-Ntg f 59.4 5.5148 70.2757 48.5243
(B6.5XFAD x BXD61)F1-Ntg m 49.8 5.5148 60.6757 38.9243
(B6.5XFAD x BXD62)F1-ADtg f 50.0 8.7197 67.196 32.804
(B6.5XFAD x BXD62)F1-ADtg m 38.0 8.7197 55.196 20.804
(B6.5XFAD x BXD62)F1-Ntg f 40.0 7.1196 54.0405 25.9595
(B6.5XFAD x BXD62)F1-Ntg m 51.6667 7.1196 65.7071 37.6262
(B6.5XFAD x BXD65)F1-ADtg f 51.1429 4.6609 60.3345 41.9512
(B6.5XFAD x BXD65)F1-ADtg m 55.5 8.7197 72.696 38.304
(B6.5XFAD x BXD65)F1-Ntg f 51.375 4.3599 59.973 42.777
(B6.5XFAD x BXD65)F1-Ntg m 61.0 8.7197 78.196 43.804
(B6.5XFAD x BXD66)F1-ADtg f 54.6667 7.1196 68.7071 40.6262
(B6.5XFAD x BXD66)F1-ADtg m 63.75 6.1658 75.9094 51.5906
(B6.5XFAD x BXD68)F1-ADtg f 65.0 7.1196 79.0405 50.9595
(B6.5XFAD x BXD68)F1-ADtg m 59.1429 4.6609 68.3345 49.9512
(B6.5XFAD x BXD68)F1-Ntg f 52.6 3.8996 60.2903 44.9097
(B6.5XFAD x BXD68)F1-Ntg m 77.5 8.7197 94.696 60.304
(B6.5XFAD x BXD69)F1-ADtg f 51.3333 5.0343 61.2614 41.4052
(B6.5XFAD x BXD69)F1-ADtg m 48.6 5.5148 59.4757 37.7243
(B6.5XFAD x BXD69)F1-Ntg f 59.4 5.5148 70.2757 48.5243
(B6.5XFAD x BXD69)F1-Ntg m 53.5 5.0343 63.4281 43.5719
(B6.5XFAD x BXD70)F1-Ntg f 65.5 8.7197 82.696 48.304
(B6.5XFAD x BXD70)F1-Ntg m 58.0 8.7197 75.196 40.804
(B6.5XFAD x BXD75)F1-ADtg f 44.0 6.1658 56.1594 31.8406
(B6.5XFAD x BXD75)F1-ADtg m 67.5 6.1658 79.6594 55.3406
(B6.5XFAD x BXD77)F1-ADtg f 58.25 6.1658 70.4094 46.0906
(B6.5XFAD x BXD77)F1-ADtg m 56.3333 7.1196 70.3738 42.2929
(B6.5XFAD x BXD77)F1-Ntg f 56.5 3.8996 64.1903 48.8097
(B6.5XFAD x BXD77)F1-Ntg m 51.5 5.0343 61.4281 41.5719
(B6.5XFAD x BXD87)F1-ADtg f 52.2 3.8996 59.8903 44.5097
(B6.5XFAD x BXD87)F1-ADtg m 48.25 6.1658 60.4094 36.0906
(B6.5XFAD x BXD89)F1-Ntg f 65.0 8.7197 82.196 47.804
(B6.5XFAD x BXD89)F1-Ntg m 49.0 8.7197 66.196 31.804
(B6.5XFAD x D2)F1-ADtg f 50.8333 2.9066 56.5653 45.1013
(B6.5XFAD x D2)F1-ADtg m 68.2857 4.6609 77.4774 59.0941
(B6.5XFAD x D2)F1-Ntg f 48.2143 3.2957 54.7138 41.7148
(B6.5XFAD x D2)F1-Ntg m 62.0 6.1658 74.1594 49.8406


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg both 59.7857 3.8646 67.407 52.1644
(B6.5XFAD x BXD100)F1-Ntg both 56.2083 3.98 64.0572 48.3595
(B6.5XFAD x BXD32)F1-ADtg both 49.9167 5.6286 61.0166 38.8167
(B6.5XFAD x BXD32)F1-Ntg both 45.5833 5.6286 56.6833 34.4834
(B6.5XFAD x BXD44)F1-ADtg both 59.2644 2.7706 64.7284 53.8005
(B6.5XFAD x BXD61)F1-ADtg both 60.9167 4.7092 70.2036 51.6298
(B6.5XFAD x BXD61)F1-Ntg both 54.6 3.8996 62.2903 46.9097
(B6.5XFAD x BXD62)F1-ADtg both 44.0 6.1658 56.1594 31.8406
(B6.5XFAD x BXD62)F1-Ntg both 45.8333 5.0343 55.7614 35.9052
(B6.5XFAD x BXD65)F1-ADtg both 53.3214 4.9436 63.0706 43.5722
(B6.5XFAD x BXD65)F1-Ntg both 56.1875 4.8745 65.8003 46.5747
(B6.5XFAD x BXD66)F1-ADtg both 59.2083 4.7092 68.4952 49.9214
(B6.5XFAD x BXD68)F1-ADtg both 62.0714 4.2548 70.4622 53.6806
(B6.5XFAD x BXD68)F1-Ntg both 65.05 4.776 74.4686 55.6314
(B6.5XFAD x BXD69)F1-ADtg both 49.9667 3.7336 57.3295 42.6038
(B6.5XFAD x BXD69)F1-Ntg both 56.45 3.7336 63.8129 49.0871
(B6.5XFAD x BXD70)F1-Ntg both 61.75 6.1658 73.9094 49.5906
(B6.5XFAD x BXD75)F1-ADtg both 55.75 4.3599 64.348 47.152
(B6.5XFAD x BXD77)F1-ADtg both 57.2917 4.7092 66.5786 48.0048
(B6.5XFAD x BXD77)F1-Ntg both 54.0 3.184 60.2791 47.7209
(B6.5XFAD x BXD87)F1-ADtg both 50.225 3.6477 57.4186 43.0314
(B6.5XFAD x BXD89)F1-Ntg both 57.0 6.1658 69.1594 44.8406
(B6.5XFAD x D2)F1-ADtg both 59.5595 2.7465 64.9757 54.1433
(B6.5XFAD x D2)F1-Ntg both 55.1071 3.4957 62.0009 48.2134




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA