Phenotype measure:   Neuner1   Ymaze_spon_alt_12mo

ID, description, units MPD:65918   Ymaze_spon_alt_12mo   percentage spontaneous alternation in Y-maze   [%]  12 mo
Data set, strains Neuner1   F1 AD-BXD   49 strains     sex: both     age: 7-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage spontaneous alternation in Y-maze 12 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested46 strains35 strains
Mean of the strain means54.81   % 59.08   %
Median of the strain means55.66   % 58.8   %
SD of the strain means± 8.6057 ± 8.7454
Coefficient of variation (CV)0.157 0.148
Min–max range of strain means27.667   –   75.0   % 39.0   –   88.0   %
Mean sample size per strain4.6   mice 4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1282.4806 1282.4806 5.7771 0.017
strain 25 6455.9372 258.2375 1.1633 0.2749
sex:strain 25 3685.5642 147.4226 0.6641 0.8885
Residuals 240 53278.8537 221.9952


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 68.25 18.209   4 9.1047 0.2668 52.0, 85.0 1.56
(B6.5XFAD x B6)F1-ADtg m 58.48 15.619   21 3.4084 0.2671 -0.07
(B6.5XFAD x B6)F1-Ntg f 51.11 19.896   9 6.6321 0.3893 -0.43
(B6.5XFAD x B6)F1-Ntg m 58.8 10.25   10 3.2414 0.1743 40.0, 76.0 -0.03
(B6.5XFAD x BXD100)F1-ADtg f 46.0 8.4853   2   6.0 0.1845 40.0, 52.0 -1.02
(B6.5XFAD x BXD100)F1-ADtg m 48.0 18.753   7 7.0879 0.3907 25.0, 78.0 -1.27
(B6.5XFAD x BXD100)F1-Ntg f 52.25 20.32   4 10.16 0.3889 23.0, 67.0 -0.3
(B6.5XFAD x BXD100)F1-Ntg m 59.5 17.375   6 7.0934 0.292 25.0, 71.0 0.05
(B6.5XFAD x BXD14)F1-ADtg f 67.67 15.503   3 8.9505 0.2291 52.0, 83.0 1.49
(B6.5XFAD x BXD14)F1-Ntg f 57.5 3.5355   2   2.5 0.0615 55.0, 60.0 0.31
(B6.5XFAD x BXD16)F1-ADtg f 75.0 11.314   2   8.0 0.1508 67.0, 83.0 2.35
(B6.5XFAD x BXD22)F1-ADtg f 51.0 11.314   2   8.0 0.2218 43.0, 59.0 -0.44
(B6.5XFAD x BXD22)F1-Ntg f 62.0 4.2426   2   3.0 0.0684 59.0, 65.0 0.84
(B6.5XFAD x BXD32)F1-ADtg f 27.667 25.423   3 14.678 0.9189 -3.15
(B6.5XFAD x BXD32)F1-ADtg m 61.67 10.693   3 6.1734 0.1734 55.0, 74.0 0.3
(B6.5XFAD x BXD32)F1-Ntg f 58.0 15.0   3 8.6603 0.2586 43.0, 73.0 0.37
(B6.5XFAD x BXD32)F1-Ntg m 52.0 15.556   2   11.0 0.2992 41.0, 63.0 -0.81
(B6.5XFAD x BXD44)F1-ADtg f 58.17 11.769   12 3.3975 0.2023 42.0, 86.0 0.39
(B6.5XFAD x BXD44)F1-ADtg m 64.0 14.353   6 5.8595 0.2243 45.0, 87.0 0.56
(B6.5XFAD x BXD44)F1-Ntg m 63.67 12.014   3 6.9362 0.1887 52.0, 76.0 0.52
(B6.5XFAD x BXD51)F1-ADtg f 61.8 5.5857   5 2.498 0.0904 55.0, 67.0 0.81
(B6.5XFAD x BXD51)F1-Ntg f 57.0 7.0711   2   5.0 0.1241 52.0, 62.0 0.25
(B6.5XFAD x BXD55)F1-ADtg f 43.75 12.093   4 6.0467 0.2764 34.0, 61.0 -1.28
(B6.5XFAD x BXD55)F1-Ntg f 52.0 0.0   1   0.0 0.0 52.0, 52.0 -0.33
(B6.5XFAD x BXD56)F1-ADtg m 61.33 13.429   3 7.7531 0.2189 46.0, 71.0 0.26
(B6.5XFAD x BXD56)F1-Ntg f 61.5 6.364   2   4.5 0.1035 57.0, 66.0 0.78
(B6.5XFAD x BXD56)F1-Ntg m 72.0 0.0   1   0.0 0.0 72.0, 72.0 1.48
(B6.5XFAD x BXD60)F1-ADtg f 42.75 15.392   4 7.696 0.36 30.0, 64.0 -1.4
(B6.5XFAD x BXD60)F1-ADtg m 51.4 12.602   5 5.6356 0.2452 36.0, 71.0 -0.88
(B6.5XFAD x BXD60)F1-Ntg f 56.0 4.2426   2   3.0 0.0758 53.0, 59.0 0.14
(B6.5XFAD x BXD61)F1-ADtg f 61.0 5.6273   7 2.1269 0.0923 53.0, 69.0 0.72
(B6.5XFAD x BXD61)F1-ADtg m 56.0 21.0   3 12.124 0.375 41.0, 80.0 -0.35
(B6.5XFAD x BXD61)F1-Ntg f 52.2 22.852   5 10.22 0.4378 30.0, 88.0 -0.3
(B6.5XFAD x BXD61)F1-Ntg m 63.8 21.845   5 9.7693 0.3424 44.0, 100.0 0.54
(B6.5XFAD x BXD62)F1-ADtg f 47.25 10.72   4 5.36 0.2269 33.0, 59.0 -0.88
(B6.5XFAD x BXD62)F1-ADtg m 51.0 8.4853   2   6.0 0.1664 45.0, 57.0 -0.92
(B6.5XFAD x BXD62)F1-Ntg f 59.67 10.017   3 5.7831 0.1679 52.0, 71.0 0.56
(B6.5XFAD x BXD62)F1-Ntg m 70.0 26.458   3 15.275 0.378 50.0, 100.0 1.25
(B6.5XFAD x BXD65)F1-ADtg f 55.33 6.4704   6 2.6415 0.1169 45.0, 61.0 0.06
(B6.5XFAD x BXD65)F1-ADtg m 57.5 3.5355   2   2.5 0.0615 55.0, 60.0 -0.18
(B6.5XFAD x BXD65)F1-Ntg f 49.714 6.2906   7 2.3776 0.1265 38.0, 56.0 -0.59
(B6.5XFAD x BXD65)F1-Ntg m 65.0 28.284   2   20.0 0.4351 45.0, 85.0 0.68
(B6.5XFAD x BXD66)F1-ADtg f 49.0 7.0711   2   5.0 0.1443 44.0, 54.0 -0.67
(B6.5XFAD x BXD66)F1-ADtg m 57.0 9.9666   4 4.9833 0.1749 47.0, 67.0 -0.24
(B6.5XFAD x BXD66)F1-Ntg f 67.0 0.0   1   0.0 0.0 67.0, 67.0 1.42
(B6.5XFAD x BXD66)F1-Ntg m 39.0 34.22   3 19.757 0.8774 -2.3
(B6.5XFAD x BXD68)F1-ADtg f 62.0 12.124   3 7.0 0.1956 48.0, 69.0 0.84
(B6.5XFAD x BXD68)F1-ADtg m 57.57 11.646   7 4.4016 0.2023 39.0, 73.0 -0.17
(B6.5XFAD x BXD68)F1-Ntg f 47.9 8.7617   10 2.7707 0.1829 35.0, 64.0 -0.8
(B6.5XFAD x BXD68)F1-Ntg m 58.5 14.849   2   10.5 0.2538 48.0, 69.0 -0.07
(B6.5XFAD x BXD69)F1-ADtg f 53.5 9.3755   6 3.8275 0.1752 43.0, 67.0 -0.15
(B6.5XFAD x BXD69)F1-ADtg m 59.4 12.7   5 5.6798 0.2138 45.0, 75.0 0.04
(B6.5XFAD x BXD69)F1-Ntg f 59.0 13.638   5 6.0992 0.2312 48.0, 80.0 0.49
(B6.5XFAD x BXD69)F1-Ntg m 62.0 7.874   6 3.2146 0.127 54.0, 71.0 0.33
(B6.5XFAD x BXD70)F1-ADtg f 50.0 0.0   1   0.0 0.0 50.0, 50.0 -0.56
(B6.5XFAD x BXD70)F1-ADtg m 65.67 11.93   3 6.888 0.1817 52.0, 74.0 0.75
(B6.5XFAD x BXD70)F1-Ntg f 62.0 0.0   1   0.0 0.0 62.0, 62.0 0.84
(B6.5XFAD x BXD70)F1-Ntg m 88.0 2.8284   2   2.0 0.0321 86.0, 90.0 3.31
(B6.5XFAD x BXD75)F1-ADtg f 45.75 25.617   4 12.809 0.5599 10.0, 69.0 -1.05
(B6.5XFAD x BXD75)F1-ADtg m 50.25 7.3201   4 3.66 0.1457 40.0, 56.0 -1.01
(B6.5XFAD x BXD75)F1-Ntg f 62.0 16.444   6 6.7132 0.2652 44.0, 89.0 0.84
(B6.5XFAD x BXD75)F1-Ntg m 62.0 0.0   1   0.0 0.0 62.0, 62.0 0.33
(B6.5XFAD x BXD77)F1-ADtg f 66.4 12.422   5 5.5552 0.1871 56.0, 87.0 1.35
(B6.5XFAD x BXD77)F1-ADtg m 65.0 13.454   3 7.7675 0.207 50.0, 76.0 0.68
(B6.5XFAD x BXD77)F1-Ntg f 55.0 9.1652   10 2.8983 0.1666 41.0, 69.0 0.02
(B6.5XFAD x BXD77)F1-Ntg m 67.33 17.328   6 7.0742 0.2573 33.0, 80.0 0.94
(B6.5XFAD x BXD81)F1-ADtg f 52.17 8.5186   6 3.4777 0.1633 43.0, 66.0 -0.31
(B6.5XFAD x BXD81)F1-Ntg f 43.6 1.8166   5 0.8124 0.0417 41.0, 46.0 -1.3
(B6.5XFAD x BXD87)F1-ADtg f 58.1 19.017   10 6.0138 0.3273 27.0, 89.0 0.38
(B6.5XFAD x BXD87)F1-ADtg m 55.5 8.3467   4 4.1733 0.1504 44.0, 63.0 -0.41
(B6.5XFAD x BXD87)F1-Ntg f 49.0 15.524   3 8.9629 0.3168 33.0, 64.0 -0.67
(B6.5XFAD x BXD87)F1-Ntg m 50.0 0.0   1   0.0 0.0 50.0, 50.0 -1.04
(B6.5XFAD x BXD89)F1-ADtg m 42.0 0.0   1   0.0 0.0 42.0, 42.0 -1.95
(B6.5XFAD x BXD89)F1-Ntg f 59.5 13.435   2   9.5 0.2258 50.0, 69.0 0.55
(B6.5XFAD x BXD89)F1-Ntg m 61.0 2.8284   2   2.0 0.0464 59.0, 63.0 0.22
(B6.5XFAD x BXD99)F1-ADtg f 57.0 0.0   1   0.0 0.0 57.0, 57.0 0.25
(B6.5XFAD x BXD99)F1-Ntg f 39.0 0.0   1   0.0 0.0 39.0, 39.0 -1.84
(B6.5XFAD x D2)F1-ADtg f 57.76 19.318   17 4.6853 0.3344 0.34
(B6.5XFAD x D2)F1-ADtg m 56.62 16.587   8 5.8644 0.2929 40.0, 89.0 -0.28
(B6.5XFAD x D2)F1-Ntg f 50.92 14.457   12 4.1733 0.2839 27.0, 72.0 -0.45
(B6.5XFAD x D2)F1-Ntg m 56.8 6.7602   5 3.0232 0.119 50.0, 68.0 -0.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 68.25 7.4498 82.9252 53.5748
(B6.5XFAD x B6)F1-ADtg m 58.4762 3.2513 64.881 52.0714
(B6.5XFAD x B6)F1-Ntg f 51.1111 4.9665 60.8946 41.3276
(B6.5XFAD x B6)F1-Ntg m 58.8 4.7116 68.0814 49.5186
(B6.5XFAD x BXD100)F1-ADtg f 46.0 10.5355 66.7539 25.2461
(B6.5XFAD x BXD100)F1-ADtg m 48.0 5.6315 59.0934 36.9066
(B6.5XFAD x BXD100)F1-Ntg f 52.25 7.4498 66.9252 37.5748
(B6.5XFAD x BXD100)F1-Ntg m 59.5 6.0827 71.4823 47.5177
(B6.5XFAD x BXD32)F1-ADtg f 27.6667 8.6022 44.6122 10.7211
(B6.5XFAD x BXD32)F1-ADtg m 61.6667 8.6022 78.6122 44.7211
(B6.5XFAD x BXD32)F1-Ntg f 58.0 8.6022 74.9455 41.0545
(B6.5XFAD x BXD32)F1-Ntg m 52.0 10.5355 72.7539 31.2461
(B6.5XFAD x BXD44)F1-ADtg f 58.1667 4.3011 66.6394 49.6939
(B6.5XFAD x BXD44)F1-ADtg m 64.0 6.0827 75.9823 52.0177
(B6.5XFAD x BXD60)F1-ADtg f 42.75 7.4498 57.4252 28.0748
(B6.5XFAD x BXD60)F1-ADtg m 51.4 6.6633 64.5259 38.2741
(B6.5XFAD x BXD61)F1-ADtg f 61.0 5.6315 72.0934 49.9066
(B6.5XFAD x BXD61)F1-ADtg m 56.0 8.6022 72.9455 39.0545
(B6.5XFAD x BXD61)F1-Ntg f 52.2 6.6633 65.3259 39.0741
(B6.5XFAD x BXD61)F1-Ntg m 63.8 6.6633 76.9259 50.6741
(B6.5XFAD x BXD62)F1-ADtg f 47.25 7.4498 61.9252 32.5748
(B6.5XFAD x BXD62)F1-ADtg m 51.0 10.5355 71.7539 30.2461
(B6.5XFAD x BXD62)F1-Ntg f 59.6667 8.6022 76.6122 42.7211
(B6.5XFAD x BXD62)F1-Ntg m 70.0 8.6022 86.9455 53.0545
(B6.5XFAD x BXD65)F1-ADtg f 55.3333 6.0827 67.3156 43.351
(B6.5XFAD x BXD65)F1-ADtg m 57.5 10.5355 78.2539 36.7461
(B6.5XFAD x BXD65)F1-Ntg f 49.7143 5.6315 60.8077 38.6208
(B6.5XFAD x BXD65)F1-Ntg m 65.0 10.5355 85.7539 44.2461
(B6.5XFAD x BXD66)F1-ADtg f 49.0 10.5355 69.7539 28.2461
(B6.5XFAD x BXD66)F1-ADtg m 57.0 7.4498 71.6752 42.3248
(B6.5XFAD x BXD68)F1-ADtg f 62.0 8.6022 78.9455 45.0545
(B6.5XFAD x BXD68)F1-ADtg m 57.5714 5.6315 68.6649 46.478
(B6.5XFAD x BXD68)F1-Ntg f 47.9 4.7116 57.1814 38.6186
(B6.5XFAD x BXD68)F1-Ntg m 58.5 10.5355 79.2539 37.7461
(B6.5XFAD x BXD69)F1-ADtg f 53.5 6.0827 65.4823 41.5177
(B6.5XFAD x BXD69)F1-ADtg m 59.4 6.6633 72.5259 46.2741
(B6.5XFAD x BXD69)F1-Ntg f 59.0 6.6633 72.1259 45.8741
(B6.5XFAD x BXD69)F1-Ntg m 62.0 6.0827 73.9823 50.0177
(B6.5XFAD x BXD75)F1-ADtg f 45.75 7.4498 60.4252 31.0748
(B6.5XFAD x BXD75)F1-ADtg m 50.25 7.4498 64.9252 35.5748
(B6.5XFAD x BXD77)F1-ADtg f 66.4 6.6633 79.5259 53.2741
(B6.5XFAD x BXD77)F1-ADtg m 65.0 8.6022 81.9455 48.0545
(B6.5XFAD x BXD77)F1-Ntg f 55.0 4.7116 64.2814 45.7186
(B6.5XFAD x BXD77)F1-Ntg m 67.3333 6.0827 79.3156 55.351
(B6.5XFAD x BXD87)F1-ADtg f 58.1 4.7116 67.3814 48.8186
(B6.5XFAD x BXD87)F1-ADtg m 55.5 7.4498 70.1752 40.8248
(B6.5XFAD x BXD89)F1-Ntg f 59.5 10.5355 80.2539 38.7461
(B6.5XFAD x BXD89)F1-Ntg m 61.0 10.5355 81.7539 40.2461
(B6.5XFAD x D2)F1-ADtg f 57.7647 3.6137 64.8832 50.6462
(B6.5XFAD x D2)F1-ADtg m 56.625 5.2678 67.002 46.248
(B6.5XFAD x D2)F1-Ntg f 50.9167 4.3011 59.3894 42.4439
(B6.5XFAD x D2)F1-Ntg m 56.8 6.6633 69.9259 43.6741


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 63.3631 4.0642 71.3691 55.3571
(B6.5XFAD x B6)F1-Ntg both 54.9556 3.4229 61.6984 48.2127
(B6.5XFAD x BXD100)F1-ADtg both 47.0 5.9731 58.7664 35.2336
(B6.5XFAD x BXD100)F1-Ntg both 55.875 4.8088 65.3478 46.4022
(B6.5XFAD x BXD32)F1-ADtg both 44.6667 6.0827 56.649 32.6844
(B6.5XFAD x BXD32)F1-Ntg both 55.0 6.8007 68.3966 41.6034
(B6.5XFAD x BXD44)F1-ADtg both 61.0833 3.7249 68.421 53.7457
(B6.5XFAD x BXD60)F1-ADtg both 47.075 4.9974 56.9195 37.2305
(B6.5XFAD x BXD61)F1-ADtg both 58.5 5.1408 68.6269 48.3731
(B6.5XFAD x BXD61)F1-Ntg both 58.0 4.7116 67.2814 48.7186
(B6.5XFAD x BXD62)F1-ADtg both 49.125 6.4517 61.8341 36.4159
(B6.5XFAD x BXD62)F1-Ntg both 64.8333 6.0827 76.8156 52.851
(B6.5XFAD x BXD65)F1-ADtg both 56.4167 6.0827 68.399 44.4344
(B6.5XFAD x BXD65)F1-Ntg both 57.3571 5.9731 69.1235 45.5908
(B6.5XFAD x BXD66)F1-ADtg both 53.0 6.4517 65.7091 40.2909
(B6.5XFAD x BXD68)F1-ADtg both 59.7857 5.1408 69.9126 49.6588
(B6.5XFAD x BXD68)F1-Ntg both 53.2 5.7706 64.5674 41.8326
(B6.5XFAD x BXD69)F1-ADtg both 56.45 4.511 65.3363 47.5637
(B6.5XFAD x BXD69)F1-Ntg both 60.5 4.511 69.3863 51.6137
(B6.5XFAD x BXD75)F1-ADtg both 48.0 5.2678 58.377 37.623
(B6.5XFAD x BXD77)F1-ADtg both 65.7 5.4405 76.4173 54.9827
(B6.5XFAD x BXD77)F1-Ntg both 61.1667 3.847 68.7449 53.5884
(B6.5XFAD x BXD87)F1-ADtg both 56.8 4.4073 65.482 48.118
(B6.5XFAD x BXD89)F1-Ntg both 60.25 7.4498 74.9252 45.5748
(B6.5XFAD x D2)F1-ADtg both 57.1949 3.1941 63.4868 50.9029
(B6.5XFAD x D2)F1-Ntg both 53.8583 3.9654 61.6698 46.0468




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA