Phenotype measure:   Neuner1   Ymaze_spon_alt_8mo

ID, description, units MPD:65916   Ymaze_spon_alt_8mo   percentage spontaneous alternation in Y-maze   [%]  8 mo
Data set, strains Neuner1   F1 AD-BXD   53 strains     sex: both     age: 7-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage spontaneous alternation in Y-maze 8 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested48 strains35 strains
Mean of the strain means56.84   % 57.6   %
Median of the strain means58.0   % 58.33   %
SD of the strain means± 7.7564 ± 9.933
Coefficient of variation (CV)0.1365 0.1724
Min–max range of strain means37.667   –   78.0   % 30.0   –   76.67   %
Mean sample size per strain4.4   mice 3.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 203.5514 203.5514 0.9997 0.3186
strain 23 5721.9963 248.7824 1.2219 0.23
sex:strain 23 4621.3651 200.9289 0.9869 0.4841
Residuals 193 39295.4191 203.6032


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 55.4 7.7006   5 3.4438 0.139 47.0, 62.0 -0.19
(B6.5XFAD x B6)F1-ADtg m 63.31 11.302   13 3.1346 0.1785 50.0, 85.0 0.57
(B6.5XFAD x B6)F1-Ntg f 58.0 1.4142   2   1.0 0.0244 57.0, 59.0 0.15
(B6.5XFAD x B6)F1-Ntg m 61.67 12.155   9 4.0517 0.1971 39.0, 83.0 0.41
(B6.5XFAD x BXD100)F1-ADtg f 58.5 2.1213   2   1.5 0.0363 57.0, 60.0 0.21
(B6.5XFAD x BXD100)F1-ADtg m 62.29 13.263   7 5.0129 0.2129 46.0, 83.0 0.47
(B6.5XFAD x BXD100)F1-Ntg f 58.0 4.397   4 2.1985 0.0758 53.0, 63.0 0.15
(B6.5XFAD x BXD100)F1-Ntg m 76.67 13.866   6 5.6608 0.1809 60.0, 100.0 1.92
(B6.5XFAD x BXD14)F1-ADtg f 64.33 14.295   3 8.2529 0.2222 52.0, 80.0 0.97
(B6.5XFAD x BXD14)F1-Ntg f 58.5 6.364   2   4.5 0.1088 54.0, 63.0 0.21
(B6.5XFAD x BXD16)F1-ADtg f 43.25 13.2   4 6.6002 0.3052 36.0, 63.0 -1.75
(B6.5XFAD x BXD22)F1-ADtg f 42.5 17.678   2   12.5 0.4159 30.0, 55.0 -1.85
(B6.5XFAD x BXD22)F1-Ntg f 59.67 1.1547   3 0.66667 0.0194 59.0, 61.0 0.37
(B6.5XFAD x BXD2)F1-ADtg f 60.5 2.3805   4 1.1902 0.0393 58.0, 63.0 0.47
(B6.5XFAD x BXD2)F1-Ntg f 58.0 0.0   1   0.0 0.0 58.0, 58.0 0.15
(B6.5XFAD x BXD32)F1-ADtg f 46.333 12.662   3 7.3106 0.2733 35.0, 60.0 -1.35
(B6.5XFAD x BXD32)F1-ADtg m 60.67 9.7125   3 5.6075 0.1601 50.0, 69.0 0.31
(B6.5XFAD x BXD32)F1-Ntg f 54.33 17.559   3 10.138 0.3232 36.0, 71.0 -0.32
(B6.5XFAD x BXD32)F1-Ntg m 38.5 54.45   2   38.5 1.4142 -1.92
(B6.5XFAD x BXD34)F1-ADtg f 59.5 10.607   2   7.5 0.1783 52.0, 67.0 0.34
(B6.5XFAD x BXD34)F1-Ntg f 68.0 0.0   1   0.0 0.0 68.0, 68.0 1.44
(B6.5XFAD x BXD42)F1-ADtg f 37.667 11.372   3 6.5659 0.3019 25.0, 47.0 -2.47
(B6.5XFAD x BXD42)F1-Ntg f 67.0 0.0   1   0.0 0.0 67.0, 67.0 1.31
(B6.5XFAD x BXD44)F1-ADtg f 52.67 15.558   12 4.4913 0.2954 25.0, 80.0 -0.54
(B6.5XFAD x BXD44)F1-ADtg m 56.25 11.374   8 4.0211 0.2022 40.0, 80.0 -0.14
(B6.5XFAD x BXD44)F1-Ntg m 58.33 12.503   3 7.2188 0.2143 46.0, 71.0 0.07
(B6.5XFAD x BXD51)F1-ADtg f 63.2 13.791   5 6.1677 0.2182 48.0, 83.0 0.82
(B6.5XFAD x BXD51)F1-Ntg f 51.5 11.091   4 5.5453 0.2154 36.0, 60.0 -0.69
(B6.5XFAD x BXD55)F1-ADtg f 59.57 11.414   7 4.3142 0.1916 43.0, 72.0 0.35
(B6.5XFAD x BXD55)F1-Ntg f 59.5 3.5355   2   2.5 0.0594 57.0, 62.0 0.34
(B6.5XFAD x BXD56)F1-ADtg m 53.67 7.0946   3 4.0961 0.1322 46.0, 60.0 -0.4
(B6.5XFAD x BXD56)F1-Ntg f 64.0 4.2426   2   3.0 0.0663 61.0, 67.0 0.92
(B6.5XFAD x BXD56)F1-Ntg m 62.0 0.0   1   0.0 0.0 62.0, 62.0 0.44
(B6.5XFAD x BXD60)F1-ADtg f 50.5 12.369   4 6.1847 0.2449 40.0, 68.0 -0.82
(B6.5XFAD x BXD60)F1-ADtg m 56.4 22.612   5 10.112 0.4009 36.0, 88.0 -0.12
(B6.5XFAD x BXD60)F1-Ntg f 55.0 16.643   3 9.609 0.3026 36.0, 67.0 -0.24
(B6.5XFAD x BXD61)F1-ADtg f 66.29 25.349   7 9.581 0.3824 43.0, 100.0 1.22
(B6.5XFAD x BXD61)F1-ADtg m 50.0 15.395   3 8.8882 0.3079 33.0, 63.0 -0.77
(B6.5XFAD x BXD61)F1-Ntg f 54.6 23.944   5 10.708 0.4385 18.0, 80.0 -0.29
(B6.5XFAD x BXD61)F1-Ntg m 58.5 13.953   6 5.6965 0.2385 44.0, 81.0 0.09
(B6.5XFAD x BXD62)F1-ADtg f 47.333 11.15   3 6.4377 0.2356 39.0, 60.0 -1.23
(B6.5XFAD x BXD62)F1-ADtg m 43.5 9.1924   2   6.5 0.2113 37.0, 50.0 -1.42
(B6.5XFAD x BXD62)F1-Ntg f 58.0 8.544   3 4.9329 0.1473 50.0, 67.0 0.15
(B6.5XFAD x BXD62)F1-Ntg m 61.33 33.546   3 19.368 0.5469 40.0, 100.0 0.38
(B6.5XFAD x BXD65)F1-ADtg f 47.857 12.185   7 4.6055 0.2546 27.0, 64.0 -1.16
(B6.5XFAD x BXD65)F1-ADtg m 57.0 0.0   1   0.0 0.0 57.0, 57.0 -0.06
(B6.5XFAD x BXD65)F1-Ntg f 54.88 4.8237   8 1.7054 0.0879 50.0, 64.0 -0.25
(B6.5XFAD x BXD65)F1-Ntg m 50.5 14.849   2   10.5 0.294 40.0, 61.0 -0.72
(B6.5XFAD x BXD66)F1-ADtg f 78.0 0.0   1   0.0 0.0 78.0, 78.0 2.73
(B6.5XFAD x BXD66)F1-ADtg m 74.25 20.271   4 10.136 0.273 54.0, 100.0 1.68
(B6.5XFAD x BXD66)F1-Ntg m 60.0 3.4641   3 2.0 0.0577 58.0, 64.0 0.24
(B6.5XFAD x BXD68)F1-ADtg f 60.0 16.093   3 9.2916 0.2682 42.0, 73.0 0.41
(B6.5XFAD x BXD68)F1-ADtg m 46.857 11.824   7 4.4691 0.2523 27.0, 56.0 -1.08
(B6.5XFAD x BXD68)F1-Ntg f 65.33 9.2331   9 3.0777 0.1413 50.0, 78.0 1.1
(B6.5XFAD x BXD68)F1-Ntg m 62.5 6.364   2   4.5 0.1018 58.0, 67.0 0.49
(B6.5XFAD x BXD69)F1-ADtg f 42.75 12.971   4 6.4856 0.3034 29.0, 57.0 -1.82
(B6.5XFAD x BXD69)F1-ADtg m 61.5 13.435   2   9.5 0.2185 52.0, 71.0 0.39
(B6.5XFAD x BXD69)F1-Ntg f 54.5 14.457   4 7.2284 0.2653 42.0, 68.0 -0.3
(B6.5XFAD x BXD69)F1-Ntg m 51.0 9.8995   2   7.0 0.1941 44.0, 58.0 -0.66
(B6.5XFAD x BXD70)F1-ADtg f 63.0 0.0   1   0.0 0.0 63.0, 63.0 0.79
(B6.5XFAD x BXD70)F1-ADtg m 63.33 18.771   3 10.837 0.2964 43.0, 80.0 0.58
(B6.5XFAD x BXD70)F1-Ntg f 66.0 9.5394   3 5.5076 0.1445 57.0, 76.0 1.18
(B6.5XFAD x BXD70)F1-Ntg m 53.0 19.799   2   14.0 0.3736 39.0, 67.0 -0.46
(B6.5XFAD x BXD75)F1-ADtg f 53.0 3.559   4 1.7795 0.0672 50.0, 57.0 -0.49
(B6.5XFAD x BXD75)F1-ADtg m 53.25 25.25   4 12.625 0.4742 25.0, 86.0 -0.44
(B6.5XFAD x BXD75)F1-Ntg f 61.67 16.99   6 6.9362 0.2755 38.0, 83.0 0.62
(B6.5XFAD x BXD75)F1-Ntg m 30.0 0.0   1   0.0 0.0 30.0, 30.0 -2.78
(B6.5XFAD x BXD77)F1-ADtg f 52.8 17.312   5 7.7421 0.3279 29.0, 74.0 -0.52
(B6.5XFAD x BXD77)F1-ADtg m 70.67 5.8595   3 3.383 0.0829 64.0, 75.0 1.32
(B6.5XFAD x BXD77)F1-Ntg f 63.0 14.414   10 4.5583 0.2288 47.0, 88.0 0.79
(B6.5XFAD x BXD77)F1-Ntg m 56.67 10.053   6 4.1042 0.1774 42.0, 71.0 -0.09
(B6.5XFAD x BXD81)F1-ADtg f 48.0 10.04   6 4.0988 0.2092 38.0, 65.0 -1.14
(B6.5XFAD x BXD81)F1-Ntg f 50.8 4.9193   5 2.2 0.0968 45.0, 58.0 -0.78
(B6.5XFAD x BXD87)F1-ADtg f 56.7 8.4466   10 2.671 0.149 44.0, 67.0 -0.02
(B6.5XFAD x BXD87)F1-ADtg m 56.5 17.137   4 8.5684 0.3033 40.0, 75.0 -0.11
(B6.5XFAD x BXD87)F1-Ntg f 65.67 27.062   3 15.624 0.4121 36.0, 89.0 1.14
(B6.5XFAD x BXD87)F1-Ntg m 44.0 0.0   1   0.0 0.0 44.0, 44.0 -1.37
(B6.5XFAD x BXD89)F1-ADtg m 73.0 0.0   1   0.0 0.0 73.0, 73.0 1.55
(B6.5XFAD x BXD89)F1-Ntg m 71.5 0.70711   2   0.5 0.0099 71.0, 72.0 1.4
(B6.5XFAD x D2)F1-ADtg f 59.55 9.8525   11 2.9707 0.1655 43.0, 75.0 0.35
(B6.5XFAD x D2)F1-ADtg m 52.5 4.2032   4 2.1016 0.0801 47.0, 57.0 -0.51
(B6.5XFAD x D2)F1-Ntg f 53.0 11.441   10 3.6179 0.2159 33.0, 70.0 -0.49
(B6.5XFAD x D2)F1-Ntg m 65.0 2.8284   2   2.0 0.0435 63.0, 67.0 0.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 55.4 6.3813 67.986 42.814
(B6.5XFAD x B6)F1-ADtg m 63.3077 3.9575 71.1132 55.5022
(B6.5XFAD x B6)F1-Ntg f 58.0 10.0897 77.9002 38.0998
(B6.5XFAD x B6)F1-Ntg m 61.6667 4.7563 71.0477 52.2856
(B6.5XFAD x BXD100)F1-ADtg f 58.5 10.0897 78.4002 38.5998
(B6.5XFAD x BXD100)F1-ADtg m 62.2857 5.3932 72.9228 51.6486
(B6.5XFAD x BXD100)F1-Ntg f 58.0 7.1345 72.0716 43.9284
(B6.5XFAD x BXD100)F1-Ntg m 76.6667 5.8253 88.156 65.1773
(B6.5XFAD x BXD32)F1-ADtg f 46.3333 8.2382 62.5818 30.0849
(B6.5XFAD x BXD32)F1-ADtg m 60.6667 8.2382 76.9151 44.4182
(B6.5XFAD x BXD32)F1-Ntg f 54.3333 8.2382 70.5818 38.0849
(B6.5XFAD x BXD32)F1-Ntg m 38.5 10.0897 58.4002 18.5998
(B6.5XFAD x BXD44)F1-ADtg f 52.6667 4.1191 60.7909 44.5424
(B6.5XFAD x BXD44)F1-ADtg m 56.25 5.0448 66.2001 46.2999
(B6.5XFAD x BXD60)F1-ADtg f 50.5 7.1345 64.5716 36.4284
(B6.5XFAD x BXD60)F1-ADtg m 56.4 6.3813 68.986 43.814
(B6.5XFAD x BXD61)F1-ADtg f 66.2857 5.3932 76.9228 55.6486
(B6.5XFAD x BXD61)F1-ADtg m 50.0 8.2382 66.2484 33.7516
(B6.5XFAD x BXD61)F1-Ntg f 54.6 6.3813 67.186 42.014
(B6.5XFAD x BXD61)F1-Ntg m 58.5 5.8253 69.9894 47.0106
(B6.5XFAD x BXD62)F1-ADtg f 47.3333 8.2382 63.5818 31.0849
(B6.5XFAD x BXD62)F1-ADtg m 43.5 10.0897 63.4002 23.5998
(B6.5XFAD x BXD62)F1-Ntg f 58.0 8.2382 74.2484 41.7516
(B6.5XFAD x BXD62)F1-Ntg m 61.3333 8.2382 77.5818 45.0849
(B6.5XFAD x BXD65)F1-Ntg f 54.875 5.0448 64.8251 44.9249
(B6.5XFAD x BXD65)F1-Ntg m 50.5 10.0897 70.4002 30.5998
(B6.5XFAD x BXD68)F1-ADtg f 60.0 8.2382 76.2484 43.7516
(B6.5XFAD x BXD68)F1-ADtg m 46.8571 5.3932 57.4942 36.22
(B6.5XFAD x BXD68)F1-Ntg f 65.3333 4.7563 74.7144 55.9523
(B6.5XFAD x BXD68)F1-Ntg m 62.5 10.0897 82.4002 42.5998
(B6.5XFAD x BXD69)F1-ADtg f 42.75 7.1345 56.8216 28.6784
(B6.5XFAD x BXD69)F1-ADtg m 61.5 10.0897 81.4002 41.5998
(B6.5XFAD x BXD69)F1-Ntg f 54.5 7.1345 68.5716 40.4284
(B6.5XFAD x BXD69)F1-Ntg m 51.0 10.0897 70.9002 31.0998
(B6.5XFAD x BXD70)F1-Ntg f 66.0 8.2382 82.2484 49.7516
(B6.5XFAD x BXD70)F1-Ntg m 53.0 10.0897 72.9002 33.0998
(B6.5XFAD x BXD75)F1-ADtg f 53.0 7.1345 67.0716 38.9284
(B6.5XFAD x BXD75)F1-ADtg m 53.25 7.1345 67.3216 39.1784
(B6.5XFAD x BXD77)F1-ADtg f 52.8 6.3813 65.386 40.214
(B6.5XFAD x BXD77)F1-ADtg m 70.6667 8.2382 86.9151 54.4182
(B6.5XFAD x BXD77)F1-Ntg f 63.0 4.5122 71.8996 54.1004
(B6.5XFAD x BXD77)F1-Ntg m 56.6667 5.8253 68.156 45.1773
(B6.5XFAD x BXD87)F1-ADtg f 56.7 4.5122 65.5996 47.8004
(B6.5XFAD x BXD87)F1-ADtg m 56.5 7.1345 70.5716 42.4284
(B6.5XFAD x D2)F1-ADtg f 59.5455 4.3023 68.0309 51.06
(B6.5XFAD x D2)F1-ADtg m 52.5 7.1345 66.5716 38.4284
(B6.5XFAD x D2)F1-Ntg f 53.0 4.5122 61.8996 44.1004
(B6.5XFAD x D2)F1-Ntg m 65.0 10.0897 84.9002 45.0998


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 59.3538 3.7544 66.7588 51.9489
(B6.5XFAD x B6)F1-Ntg both 59.8333 5.5773 70.8336 48.8331
(B6.5XFAD x BXD100)F1-ADtg both 60.3929 5.7203 71.6752 49.1105
(B6.5XFAD x BXD100)F1-Ntg both 67.3333 4.6053 76.4165 58.2502
(B6.5XFAD x BXD32)F1-ADtg both 53.5 5.8253 64.9894 42.0106
(B6.5XFAD x BXD32)F1-Ntg both 46.4167 6.5129 59.2622 33.5711
(B6.5XFAD x BXD44)F1-ADtg both 54.4583 3.2564 60.8811 48.0356
(B6.5XFAD x BXD60)F1-ADtg both 53.45 4.786 62.8895 44.0105
(B6.5XFAD x BXD61)F1-ADtg both 58.1429 4.9233 67.8532 48.4326
(B6.5XFAD x BXD61)F1-Ntg both 56.55 4.3201 65.0708 48.0292
(B6.5XFAD x BXD62)F1-ADtg both 45.4167 6.5129 58.2622 32.5711
(B6.5XFAD x BXD62)F1-Ntg both 59.6667 5.8253 71.156 48.1773
(B6.5XFAD x BXD65)F1-Ntg both 52.6875 5.6403 63.812 41.563
(B6.5XFAD x BXD68)F1-ADtg both 53.4286 4.9233 63.1389 43.7183
(B6.5XFAD x BXD68)F1-Ntg both 63.9167 5.5773 74.9169 52.9164
(B6.5XFAD x BXD69)F1-ADtg both 52.125 6.1786 64.3113 39.9387
(B6.5XFAD x BXD69)F1-Ntg both 52.75 6.1786 64.9363 40.5637
(B6.5XFAD x BXD70)F1-Ntg both 59.5 6.5129 72.3455 46.6545
(B6.5XFAD x BXD75)F1-ADtg both 53.125 5.0448 63.0751 43.1749
(B6.5XFAD x BXD77)F1-ADtg both 61.7333 5.2103 72.0097 51.4569
(B6.5XFAD x BXD77)F1-Ntg both 59.8333 3.6842 67.0999 52.5668
(B6.5XFAD x BXD87)F1-ADtg both 56.6 4.2208 64.9248 48.2752
(B6.5XFAD x D2)F1-ADtg both 56.0227 4.1656 64.2387 47.8067
(B6.5XFAD x D2)F1-Ntg both 59.0 5.5263 69.8998 48.1002




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA