Phenotype measure:   Neuner1   Ymaze_spon_alt_6mo

ID, description, units MPD:65915   Ymaze_spon_alt_6mo   percentage spontaneous alternation in Y-maze   [%]  6 mo
Data set, strains Neuner1   F1 AD-BXD   55 strains     sex: both     age: 7-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage spontaneous alternation in Y-maze 6 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains33 strains
Mean of the strain means57.44   % 59.31   %
Median of the strain means57.52   % 62.0   %
SD of the strain means± 6.262 ± 9.2793
Coefficient of variation (CV)0.109 0.1564
Min–max range of strain means37.75   –   70.67   % 39.333   –   87.5   %
Mean sample size per strain6.9   mice 5.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.031 0.031 0.0002 0.9898
strain 29 7961.8426 274.5463 1.4506 0.0657
sex:strain 29 5705.5368 196.7426 1.0395 0.4131
Residuals 352 66621.1915 189.2647


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 56.83 12.384   6 5.0558 0.2179 36.0, 71.0 -0.1
(B6.5XFAD x B6)F1-ADtg m 62.23 13.167   13 3.6518 0.2116 37.0, 91.0 0.31
(B6.5XFAD x B6)F1-Ntg f 56.0 8.3991   12 2.4246 0.15 43.0, 67.0 -0.23
(B6.5XFAD x B6)F1-Ntg m 61.5 12.669   10 4.0062 0.206 38.0, 77.0 0.24
(B6.5XFAD x BXD100)F1-ADtg f 70.67 26.681   6 10.892 0.3776 29.0, 100.0 2.11
(B6.5XFAD x BXD100)F1-ADtg m 66.88 17.39   8 6.1483 0.26 40.0, 88.0 0.82
(B6.5XFAD x BXD100)F1-Ntg f 61.17 17.589   6 7.1806 0.2876 40.0, 80.0 0.6
(B6.5XFAD x BXD100)F1-Ntg m 62.2 16.932   5 7.5723 0.2722 47.0, 83.0 0.31
(B6.5XFAD x BXD14)F1-ADtg f 57.0 16.155   9 5.3852 0.2834 22.0, 76.0 -0.07
(B6.5XFAD x BXD14)F1-Ntg f 56.25 3.4034   4 1.7017 0.0605 52.0, 59.0 -0.19
(B6.5XFAD x BXD16)F1-ADtg f 54.38 7.463   8 2.6386 0.1373 39.0, 65.0 -0.49
(B6.5XFAD x BXD22)F1-ADtg f 51.0 14.855   4 7.4274 0.2913 32.0, 67.0 -1.03
(B6.5XFAD x BXD22)F1-Ntg f 55.75 6.9462   4 3.4731 0.1246 51.0, 66.0 -0.27
(B6.5XFAD x BXD2)F1-ADtg f 64.5 13.753   8 4.8624 0.2132 52.0, 89.0 1.13
(B6.5XFAD x BXD2)F1-Ntg f 63.43 13.049   7 4.9322 0.2057 42.0, 80.0 0.96
(B6.5XFAD x BXD32)F1-ADtg f 56.38 8.7004   8 3.076 0.1543 50.0, 75.0 -0.17
(B6.5XFAD x BXD32)F1-ADtg m 57.83 12.813   6 5.2308 0.2215 35.0, 74.0 -0.16
(B6.5XFAD x BXD32)F1-Ntg f 60.25 2.9861   4 1.493 0.0496 57.0, 64.0 0.45
(B6.5XFAD x BXD32)F1-Ntg m 63.25 10.935   4 5.4677 0.1729 48.0, 74.0 0.42
(B6.5XFAD x BXD34)F1-ADtg f 57.22 18.329   9 6.1096 0.3203 25.0, 79.0 -0.04
(B6.5XFAD x BXD34)F1-Ntg f 54.9 14.723   10 4.6558 0.2682 25.0, 71.0 -0.41
(B6.5XFAD x BXD42)F1-ADtg f 52.78 11.009   9 3.6696 0.2086 33.0, 67.0 -0.74
(B6.5XFAD x BXD42)F1-Ntg f 58.4 5.9414   5 2.6571 0.1017 50.0, 65.0 0.15
(B6.5XFAD x BXD44)F1-ADtg f 53.93 17.464   14 4.6675 0.3238 -0.56
(B6.5XFAD x BXD44)F1-ADtg m 62.1 16.428   10 5.195 0.2645 40.0, 83.0 0.3
(B6.5XFAD x BXD44)F1-Ntg f 66.0 5.6569   2   4.0 0.0857 62.0, 70.0 1.37
(B6.5XFAD x BXD44)F1-Ntg m 48.0 9.4868   4 4.7434 0.1976 41.0, 62.0 -1.22
(B6.5XFAD x BXD51)F1-ADtg f 61.33 11.99   9 3.9965 0.1955 45.0, 80.0 0.62
(B6.5XFAD x BXD51)F1-Ntg f 64.14 12.825   7 4.8473 0.1999 46.0, 77.0 1.07
(B6.5XFAD x BXD55)F1-ADtg f 53.2 10.272   10 3.2482 0.1931 31.0, 65.0 -0.68
(B6.5XFAD x BXD55)F1-Ntg f 60.33 5.5377   6 2.2608 0.0918 52.0, 66.0 0.46
(B6.5XFAD x BXD56)F1-ADtg f 68.0 5.6569   2   4.0 0.0832 64.0, 72.0 1.69
(B6.5XFAD x BXD56)F1-ADtg m 65.33 9.5044   3 5.4874 0.1455 56.0, 75.0 0.65
(B6.5XFAD x BXD56)F1-Ntg f 59.2 14.167   5 6.3356 0.2393 40.0, 79.0 0.28
(B6.5XFAD x BXD56)F1-Ntg m 63.0 0.0   1   0.0 0.0 63.0, 63.0 0.4
(B6.5XFAD x BXD60)F1-ADtg f 51.0 11.683   5 5.2249 0.2291 32.0, 63.0 -1.03
(B6.5XFAD x BXD60)F1-ADtg m 59.4 20.169   5 9.02 0.3396 29.0, 83.0 0.01
(B6.5XFAD x BXD60)F1-Ntg f 59.5 7.5939   4 3.7969 0.1276 52.0, 70.0 0.33
(B6.5XFAD x BXD61)F1-ADtg f 64.0 20.396   9 6.7987 0.3187 36.0, 100.0 1.05
(B6.5XFAD x BXD61)F1-ADtg m 52.0 23.108   4 11.554 0.4444 18.0, 67.0 -0.79
(B6.5XFAD x BXD61)F1-Ntg f 61.5 5.4681   6 2.2323 0.0889 55.0, 70.0 0.65
(B6.5XFAD x BXD61)F1-Ntg m 53.12 10.063   8 3.5579 0.1894 43.0, 68.0 -0.67
(B6.5XFAD x BXD62)F1-ADtg f 45.0 0.0   1   0.0 0.0 45.0, 45.0 -1.99
(B6.5XFAD x BXD62)F1-ADtg m 87.5 17.678   2   12.5 0.202 75.0, 100.0 3.04
(B6.5XFAD x BXD62)F1-Ntg f 56.67 17.559   3 10.138 0.3099 40.0, 75.0 -0.12
(B6.5XFAD x BXD62)F1-Ntg m 72.67 8.7369   3 5.0442 0.1202 63.0, 80.0 1.44
(B6.5XFAD x BXD65)F1-ADtg f 56.0 5.6174   10 1.7764 0.1003 49.0, 68.0 -0.23
(B6.5XFAD x BXD65)F1-ADtg m 57.75 8.1394   4 4.0697 0.1409 47.0, 65.0 -0.17
(B6.5XFAD x BXD65)F1-Ntg f 51.89 8.1309   9 2.7103 0.1567 39.0, 63.0 -0.89
(B6.5XFAD x BXD65)F1-Ntg m 53.5 8.735   6 3.566 0.1633 44.0, 69.0 -0.63
(B6.5XFAD x BXD66)F1-ADtg f 63.25 13.5   4 6.75 0.2134 44.0, 74.0 0.93
(B6.5XFAD x BXD66)F1-ADtg m 39.333 18.974   9 6.3246 0.4824 14.0, 64.0 -2.15
(B6.5XFAD x BXD66)F1-Ntg f 58.5 7.7782   2   5.5 0.133 53.0, 64.0 0.17
(B6.5XFAD x BXD66)F1-Ntg m 52.8 14.516   5 6.4915 0.2749 42.0, 74.0 -0.7
(B6.5XFAD x BXD68)F1-ADtg f 61.56 10.014   9 3.338 0.1627 47.0, 78.0 0.66
(B6.5XFAD x BXD68)F1-ADtg m 54.38 16.388   8 5.7939 0.3014 40.0, 86.0 -0.53
(B6.5XFAD x BXD68)F1-Ntg f 60.68 9.3277   19 2.1399 0.1537 46.0, 77.0 0.52
(B6.5XFAD x BXD68)F1-Ntg m 65.5 19.07   4 9.535 0.2911 54.0, 94.0 0.67
(B6.5XFAD x BXD69)F1-ADtg f 56.25 13.5   4 6.75 0.24 45.0, 75.0 -0.19
(B6.5XFAD x BXD69)F1-ADtg m 62.67 10.93   6 4.4622 0.1744 48.0, 75.0 0.36
(B6.5XFAD x BXD69)F1-Ntg f 63.5 11.79   4 5.8949 0.1857 52.0, 76.0 0.97
(B6.5XFAD x BXD69)F1-Ntg m 59.5 6.775   6 2.7659 0.1139 54.0, 69.0 0.02
(B6.5XFAD x BXD70)F1-ADtg f 41.0 0.0   1   0.0 0.0 41.0, 41.0 -2.63
(B6.5XFAD x BXD70)F1-Ntg f 52.0 0.0   1   0.0 0.0 52.0, 52.0 -0.87
(B6.5XFAD x BXD75)F1-ADtg f 49.875 10.575   8 3.739 0.212 37.0, 68.0 -1.21
(B6.5XFAD x BXD75)F1-ADtg m 63.83 16.005   6 6.5341 0.2507 43.0, 87.0 0.49
(B6.5XFAD x BXD75)F1-Ntg f 66.78 7.4963   9 2.4988 0.1123 57.0, 81.0 1.49
(B6.5XFAD x BXD75)F1-Ntg m 65.5 21.92   2   15.5 0.3347 50.0, 81.0 0.67
(B6.5XFAD x BXD77)F1-ADtg f 63.0 13.461   6 5.4955 0.2137 44.0, 85.0 0.89
(B6.5XFAD x BXD77)F1-ADtg m 66.5 8.8129   4 4.4064 0.1325 56.0, 76.0 0.77
(B6.5XFAD x BXD77)F1-Ntg f 58.5 5.3001   12 1.53 0.0906 50.0, 69.0 0.17
(B6.5XFAD x BXD77)F1-Ntg m 63.62 14.648   8 5.1787 0.2302 36.0, 82.0 0.46
(B6.5XFAD x BXD81)F1-ADtg f 53.33 13.694   12 3.953 0.2568 37.0, 79.0 -0.66
(B6.5XFAD x BXD81)F1-Ntg f 58.12 9.2341   8 3.2647 0.1589 45.0, 74.0 0.11
(B6.5XFAD x BXD87)F1-ADtg f 57.83 17.585   12 5.0764 0.3041 33.0, 90.0 0.06
(B6.5XFAD x BXD87)F1-ADtg m 53.0 21.448   5 9.5917 0.4047 16.0, 70.0 -0.68
(B6.5XFAD x BXD87)F1-Ntg f 55.17 17.927   6 7.3185 0.325 30.0, 80.0 -0.36
(B6.5XFAD x BXD87)F1-Ntg m 52.25 9.7425   4 4.8713 0.1865 42.0, 64.0 -0.76
(B6.5XFAD x BXD89)F1-ADtg m 44.0 0.0   1   0.0 0.0 44.0, 44.0 -1.65
(B6.5XFAD x BXD89)F1-Ntg f 56.5 4.9497   2   3.5 0.0876 53.0, 60.0 -0.15
(B6.5XFAD x BXD89)F1-Ntg m 40.0 11.314   2   8.0 0.2828 32.0, 48.0 -2.08
(B6.5XFAD x BXD99)F1-ADtg f 37.75 12.176   4 6.0879 0.3225 20.0, 47.0 -3.14
(B6.5XFAD x BXD99)F1-Ntg f 47.0 0.0   1   0.0 0.0 47.0, 47.0 -1.67
(B6.5XFAD x D2)F1-ADtg f 61.47 8.6261   15 2.2272 0.1403 44.0, 74.0 0.64
(B6.5XFAD x D2)F1-ADtg m 64.15 10.953   13 3.0379 0.1707 42.0, 79.0 0.52
(B6.5XFAD x D2)F1-Ntg f 61.23 15.605   13 4.3281 0.2549 38.0, 85.0 0.6
(B6.5XFAD x D2)F1-Ntg m 62.0 21.914   10 6.9298 0.3535 15.0, 91.0 0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 56.8333 5.6164 67.8793 45.7874
(B6.5XFAD x B6)F1-ADtg m 62.2308 3.8156 69.735 54.7265
(B6.5XFAD x B6)F1-Ntg f 56.0 3.9714 63.8107 48.1893
(B6.5XFAD x B6)F1-Ntg m 61.5 4.3505 70.0562 52.9438
(B6.5XFAD x BXD100)F1-ADtg f 70.6667 5.6164 81.7126 59.6207
(B6.5XFAD x BXD100)F1-ADtg m 66.875 4.864 76.4411 57.3089
(B6.5XFAD x BXD100)F1-Ntg f 61.1667 5.6164 72.2126 50.1207
(B6.5XFAD x BXD100)F1-Ntg m 62.2 6.1525 74.3002 50.0998
(B6.5XFAD x BXD32)F1-ADtg f 56.375 4.864 65.9411 46.8089
(B6.5XFAD x BXD32)F1-ADtg m 57.8333 5.6164 68.8793 46.7874
(B6.5XFAD x BXD32)F1-Ntg f 60.25 6.8787 73.7785 46.7215
(B6.5XFAD x BXD32)F1-Ntg m 63.25 6.8787 76.7785 49.7215
(B6.5XFAD x BXD44)F1-ADtg f 53.9286 3.6768 61.1598 46.6973
(B6.5XFAD x BXD44)F1-ADtg m 62.1 4.3505 70.6562 53.5438
(B6.5XFAD x BXD44)F1-Ntg f 66.0 9.7279 85.1322 46.8678
(B6.5XFAD x BXD44)F1-Ntg m 48.0 6.8787 61.5285 34.4715
(B6.5XFAD x BXD56)F1-ADtg f 68.0 9.7279 87.1322 48.8678
(B6.5XFAD x BXD56)F1-ADtg m 65.3333 7.9428 80.9547 49.712
(B6.5XFAD x BXD60)F1-ADtg f 51.0 6.1525 63.1002 38.8998
(B6.5XFAD x BXD60)F1-ADtg m 59.4 6.1525 71.5002 47.2998
(B6.5XFAD x BXD61)F1-ADtg f 64.0 4.5858 73.019 54.981
(B6.5XFAD x BXD61)F1-ADtg m 52.0 6.8787 65.5285 38.4715
(B6.5XFAD x BXD61)F1-Ntg f 61.5 5.6164 72.546 50.454
(B6.5XFAD x BXD61)F1-Ntg m 53.125 4.864 62.6911 43.5589
(B6.5XFAD x BXD62)F1-Ntg f 56.6667 7.9428 72.288 41.0453
(B6.5XFAD x BXD62)F1-Ntg m 72.6667 7.9428 88.288 57.0453
(B6.5XFAD x BXD65)F1-ADtg f 56.0 4.3505 64.5562 47.4438
(B6.5XFAD x BXD65)F1-ADtg m 57.75 6.8787 71.2785 44.2215
(B6.5XFAD x BXD65)F1-Ntg f 51.8889 4.5858 60.9079 42.8699
(B6.5XFAD x BXD65)F1-Ntg m 53.5 5.6164 64.546 42.454
(B6.5XFAD x BXD66)F1-ADtg f 63.25 6.8787 76.7785 49.7215
(B6.5XFAD x BXD66)F1-ADtg m 39.3333 4.5858 48.3523 30.3144
(B6.5XFAD x BXD66)F1-Ntg f 58.5 9.7279 77.6322 39.3678
(B6.5XFAD x BXD66)F1-Ntg m 52.8 6.1525 64.9002 40.6998
(B6.5XFAD x BXD68)F1-ADtg f 61.5556 4.5858 70.5745 52.5366
(B6.5XFAD x BXD68)F1-ADtg m 54.375 4.864 63.9411 44.8089
(B6.5XFAD x BXD68)F1-Ntg f 60.6842 3.1562 66.8915 54.4769
(B6.5XFAD x BXD68)F1-Ntg m 65.5 6.8787 79.0285 51.9715
(B6.5XFAD x BXD69)F1-ADtg f 56.25 6.8787 69.7785 42.7215
(B6.5XFAD x BXD69)F1-ADtg m 62.6667 5.6164 73.7126 51.6207
(B6.5XFAD x BXD69)F1-Ntg f 63.5 6.8787 77.0285 49.9715
(B6.5XFAD x BXD69)F1-Ntg m 59.5 5.6164 70.546 48.454
(B6.5XFAD x BXD75)F1-ADtg f 49.875 4.864 59.4411 40.3089
(B6.5XFAD x BXD75)F1-ADtg m 63.8333 5.6164 74.8793 52.7874
(B6.5XFAD x BXD75)F1-Ntg f 66.7778 4.5858 75.7968 57.7588
(B6.5XFAD x BXD75)F1-Ntg m 65.5 9.7279 84.6322 46.3678
(B6.5XFAD x BXD77)F1-ADtg f 63.0 5.6164 74.046 51.954
(B6.5XFAD x BXD77)F1-ADtg m 66.5 6.8787 80.0285 52.9715
(B6.5XFAD x BXD77)F1-Ntg f 58.5 3.9714 66.3107 50.6893
(B6.5XFAD x BXD77)F1-Ntg m 63.625 4.864 73.1911 54.0589
(B6.5XFAD x BXD87)F1-ADtg f 57.8333 3.9714 65.644 50.0227
(B6.5XFAD x BXD87)F1-ADtg m 53.0 6.1525 65.1002 40.8998
(B6.5XFAD x BXD87)F1-Ntg f 55.1667 5.6164 66.2126 44.1207
(B6.5XFAD x BXD87)F1-Ntg m 52.25 6.8787 65.7785 38.7215
(B6.5XFAD x BXD89)F1-Ntg f 56.5 9.7279 75.6322 37.3678
(B6.5XFAD x BXD89)F1-Ntg m 40.0 9.7279 59.1322 20.8678
(B6.5XFAD x D2)F1-ADtg f 61.4667 3.5521 68.4527 54.4806
(B6.5XFAD x D2)F1-ADtg m 64.1538 3.8156 71.6581 56.6496
(B6.5XFAD x D2)F1-Ntg f 61.2308 3.8156 68.735 53.7265
(B6.5XFAD x D2)F1-Ntg m 62.0 4.3505 70.5562 53.4438


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 59.5321 3.395 66.209 52.8551
(B6.5XFAD x B6)F1-Ntg both 58.75 2.9453 64.5425 52.9575
(B6.5XFAD x BXD100)F1-ADtg both 68.7708 3.7149 76.077 61.4646
(B6.5XFAD x BXD100)F1-Ntg both 61.6833 4.1652 69.8752 53.4914
(B6.5XFAD x BXD32)F1-ADtg both 57.1042 3.7149 64.4104 49.798
(B6.5XFAD x BXD32)F1-Ntg both 61.75 4.864 71.3161 52.1839
(B6.5XFAD x BXD44)F1-ADtg both 58.0143 2.848 63.6156 52.413
(B6.5XFAD x BXD44)F1-Ntg both 57.0 5.9571 68.716 45.284
(B6.5XFAD x BXD56)F1-ADtg both 66.6667 6.2793 79.0164 54.3169
(B6.5XFAD x BXD60)F1-ADtg both 55.2 4.3505 63.7562 46.6438
(B6.5XFAD x BXD61)F1-ADtg both 58.0 4.1336 66.1296 49.8704
(B6.5XFAD x BXD61)F1-Ntg both 57.3125 3.7149 64.6187 50.0063
(B6.5XFAD x BXD62)F1-Ntg both 64.6667 5.6164 75.7126 53.6207
(B6.5XFAD x BXD65)F1-ADtg both 56.875 4.0695 64.8786 48.8714
(B6.5XFAD x BXD65)F1-Ntg both 52.6944 3.6254 59.8246 45.5643
(B6.5XFAD x BXD66)F1-ADtg both 51.2917 4.1336 59.4213 43.1621
(B6.5XFAD x BXD66)F1-Ntg both 55.65 5.7551 66.9687 44.3313
(B6.5XFAD x BXD68)F1-ADtg both 57.9653 3.3424 64.5389 51.3916
(B6.5XFAD x BXD68)F1-Ntg both 63.0921 3.7841 70.5344 55.6498
(B6.5XFAD x BXD69)F1-ADtg both 59.4583 4.4402 68.1909 50.7257
(B6.5XFAD x BXD69)F1-Ntg both 61.5 4.4402 70.2326 52.7674
(B6.5XFAD x BXD75)F1-ADtg both 56.8542 3.7149 64.1604 49.548
(B6.5XFAD x BXD75)F1-Ntg both 66.1389 5.3773 76.7146 55.5632
(B6.5XFAD x BXD77)F1-ADtg both 64.75 4.4402 73.4826 56.0174
(B6.5XFAD x BXD77)F1-Ntg both 61.0625 3.1397 67.2374 54.8876
(B6.5XFAD x BXD87)F1-ADtg both 55.4167 3.6615 62.6177 48.2156
(B6.5XFAD x BXD87)F1-Ntg both 53.7083 4.4402 62.4409 44.9757
(B6.5XFAD x BXD89)F1-Ntg both 48.25 6.8787 61.7785 34.7215
(B6.5XFAD x D2)F1-ADtg both 62.8103 2.6066 67.9366 57.6839
(B6.5XFAD x D2)F1-Ntg both 61.6154 2.8933 67.3058 55.925




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA