Phenotype measure:   Neuner1   Ymaze_spon_alt_2mo

ID, description, units MPD:65913   Ymaze_spon_alt_2mo   percentage spontaneous alternation in Y-maze   [%]  2 mo
Data set, strains Neuner1   F1 AD-BXD   15 strains     sex: both     age: 7-65wks
Procedure Y-maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage spontaneous alternation in Y-maze 2 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains12 strains
Mean of the strain means63.69   % 64.48   %
Median of the strain means64.0   % 62.5   %
SD of the strain means± 6.7416 ± 8.322
Coefficient of variation (CV)0.1058 0.1291
Min–max range of strain means50.0   –   74.0   % 52.0   –   78.0   %
Mean sample size per strain2.2   mice 2.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 14.0646 14.0646 0.0955 0.7601
strain 4 324.9709 81.2427 0.5515 0.6998
sex:strain 4 641.8735 160.4684 1.0894 0.3851
Residuals 23 3388.0 147.3043


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x BXD100)F1-ADtg f 61.75 13.401   4 6.7004 0.217 50.0, 81.0 -0.29
(B6.5XFAD x BXD100)F1-ADtg m 75.0 22.113   3 12.767 0.2948 58.0, 100.0 1.26
(B6.5XFAD x BXD100)F1-Ntg f 62.5 10.607   2   7.5 0.1697 55.0, 70.0 -0.18
(B6.5XFAD x BXD44)F1-ADtg f 74.0 0.0   1   0.0 0.0 74.0, 74.0 1.53
(B6.5XFAD x BXD44)F1-ADtg m 61.75 13.301   4 6.6505 0.2154 43.0, 74.0 -0.33
(B6.5XFAD x BXD44)F1-Ntg m 75.0 0.0   1   0.0 0.0 75.0, 75.0 1.26
(B6.5XFAD x BXD60)F1-ADtg f 69.0 0.0   1   0.0 0.0 69.0, 69.0 0.79
(B6.5XFAD x BXD60)F1-ADtg m 59.0 0.0   1   0.0 0.0 59.0, 59.0 -0.66
(B6.5XFAD x BXD60)F1-Ntg f 53.5 7.7782   2   5.5 0.1454 48.0, 59.0 -1.51
(B6.5XFAD x BXD62)F1-Ntg f 71.0 0.0   1   0.0 0.0 71.0, 71.0 1.08
(B6.5XFAD x BXD62)F1-Ntg m 78.0 0.0   1   0.0 0.0 78.0, 78.0 1.62
(B6.5XFAD x BXD66)F1-ADtg f 69.0 2.8284   2   2.0 0.041 67.0, 71.0 0.79
(B6.5XFAD x BXD66)F1-ADtg m 58.5 12.021   2   8.5 0.2055 50.0, 67.0 -0.72
(B6.5XFAD x BXD66)F1-Ntg f 50.0 0.0   1   0.0 0.0 50.0, 50.0 -2.03
(B6.5XFAD x BXD66)F1-Ntg m 70.0 0.0   1   0.0 0.0 70.0, 70.0 0.66
(B6.5XFAD x BXD68)F1-ADtg f 64.5 12.503   4 6.2517 0.1939 50.0, 80.0 0.12
(B6.5XFAD x BXD68)F1-ADtg m 55.0 13.387   6 5.465 0.2434 40.0, 76.0 -1.14
(B6.5XFAD x BXD68)F1-Ntg f 62.5 6.455   4 3.2275 0.1033 55.0, 70.0 -0.18
(B6.5XFAD x BXD68)F1-Ntg m 62.0 9.8995   2   7.0 0.1597 55.0, 69.0 -0.3
(B6.5XFAD x BXD69)F1-ADtg f 59.25 6.6018   4 3.3009 0.1114 50.0, 64.0 -0.66
(B6.5XFAD x BXD69)F1-ADtg m 63.0 0.0   2   0.0 0.0 63.0, 63.0 -0.18
(B6.5XFAD x BXD69)F1-Ntg f 64.0 0.0   1   0.0 0.0 64.0, 64.0 0.05
(B6.5XFAD x BXD75)F1-ADtg f 67.0 0.0   1   0.0 0.0 67.0, 67.0 0.49
(B6.5XFAD x BXD75)F1-ADtg m 64.5 3.5355   2   2.5 0.0548 62.0, 67.0 0.0
(B6.5XFAD x BXD75)F1-Ntg m 52.0 0.0   1   0.0 0.0 52.0, 52.0 -1.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x BXD100)F1-ADtg f 61.75 6.0685 74.3035 49.1965
(B6.5XFAD x BXD100)F1-ADtg m 75.0 7.0072 89.4956 60.5044
(B6.5XFAD x BXD66)F1-ADtg f 69.0 8.5821 86.7534 51.2466
(B6.5XFAD x BXD66)F1-ADtg m 58.5 8.5821 76.2534 40.7466
(B6.5XFAD x BXD68)F1-ADtg f 64.5 6.0685 77.0535 51.9465
(B6.5XFAD x BXD68)F1-ADtg m 55.0 4.9549 65.2499 44.7501
(B6.5XFAD x BXD68)F1-Ntg f 62.5 6.0685 75.0535 49.9465
(B6.5XFAD x BXD68)F1-Ntg m 62.0 8.5821 79.7534 44.2466
(B6.5XFAD x BXD69)F1-ADtg f 59.25 6.0685 71.8035 46.6965
(B6.5XFAD x BXD69)F1-ADtg m 63.0 8.5821 80.7534 45.2466


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x BXD100)F1-ADtg both 68.375 4.6349 77.9629 58.7871
(B6.5XFAD x BXD66)F1-ADtg both 63.75 6.0685 76.3035 51.1965
(B6.5XFAD x BXD68)F1-ADtg both 59.75 3.9172 67.8533 51.6467
(B6.5XFAD x BXD68)F1-Ntg both 62.25 5.2554 73.1217 51.3783
(B6.5XFAD x BXD69)F1-ADtg both 61.125 5.2554 71.9967 50.2533




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA