Project measure / variable:   Bolivar4   dist_5min_d1_first

ID, description, units MPD:64701   dist_5min_d1_first   distance traveled on day 1, 15 min test   [cm]  first 5 min  
Data set, strains Bolivar4   inbred   14 strains     sex: m     age: 8-12wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Bolivar4 - distance traveled on day 1, 15 min test first 5 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested14 strains
Mean of the strain means1023.0   cm
Median of the strain means1014.0   cm
SD of the strain means± 510.4
Coefficient of variation (CV)0.499
Min–max range of strain means380.6   –   2317.0   cm
Mean sample size per strain18.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 13 60969340.0198 4689949.2323 39.0207 < 0.0001
Residuals 238 28605508.9444 120191.2141


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P2/OlaHsd m 506.4 384.4   18 90.61 0.7591 54.0, 1379.0 -1.01
129S1/SvImJ m 725.3 375.8   18 88.58 0.5181 81.0, 1354.0 -0.58
129S2/SvHsd m 705.9 379.3   18 89.39 0.5372 137.0, 1434.0 -0.62
129S6/SvEvTac m 655.2 378.4   18 89.18 0.5775 57.0, 1312.0 -0.72
129T2/SvEmsJ m 521.9 372.2   18 87.72 0.7131 102.0, 1232.0 -0.98
129X1/SvJ m 1165.0 313.5   18 73.9 0.269 526.0, 1839.0 0.28
A/J m 380.6 187.7   18 44.241 0.4931 79.0, 687.0 -1.26
BALB/cByJ m 1440.0 347.1   18 81.81 0.2411 793.0, 1983.0 0.82
BTBR T+ Itpr3tf/J m 2317.0 534.5   18 126.0 0.2306 1532.0, 3137.0 2.54
C3H/HeJ m 873.4 218.8   18 51.58 0.2505 147.0, 1193.0 -0.29
C57BL/6J m 1324.0 478.6   18 112.8 0.3615 663.0, 2629.0 0.59
CBA/J m 1154.0 165.5   18 39.013 0.1435 864.0, 1557.0 0.26
DBA/2J m 1330.0 277.5   18 65.41 0.2087 833.0, 1842.0 0.6
FVB/NJ m 1221.0 217.1   18 51.16 0.1777 843.0, 1676.0 0.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P2/OlaHsd m 506.4444 81.7147 667.4209 345.468
129S1/SvImJ m 725.3333 81.7147 886.3098 564.3569
129S2/SvHsd m 705.9444 81.7147 866.9209 544.968
129S6/SvEvTac m 655.1667 81.7147 816.1431 494.1902
129T2/SvEmsJ m 521.9444 81.7147 682.9209 360.968
129X1/SvJ m 1165.3333 81.7147 1326.3098 1004.3569
A/J m 380.6111 81.7147 541.5875 219.6347
BALB/cByJ m 1439.5556 81.7147 1600.532 1278.5791
BTBR T+ Itpr3tf/J m 2317.2222 81.7147 2478.1986 2156.2458
C3H/HeJ m 873.3889 81.7147 1034.3653 712.4125
C57BL/6J m 1324.0556 81.7147 1485.032 1163.0791
CBA/J m 1153.5 81.7147 1314.4764 992.5236
DBA/2J m 1329.6111 81.7147 1490.5875 1168.6347
FVB/NJ m 1221.3889 81.7147 1382.3653 1060.4125




  GWAS USING LINEAR MIXED MODELS