Project measure / variable:   Graham1   Ifit1_kidney_d2

ID, description, units MPD:63390   Ifit1_kidney_d2   Ifit1 gene expression in kidney, fold change compared to matched control, post infection    day 2  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure RNA expression profiling
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - Ifit1 gene expression in kidney, fold change compared to matched control, post infection day 2



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means12.387   None
Median of the strain means13.232   None
SD of the strain means± 5.7719
Coefficient of variation (CV)0.466
Min–max range of strain means4.9365   –   18.916   None
Mean sample size per strain1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 18.916 0.0   1   0.0 0.0 18.91626179, 18.91626179 1.13
RIX:CC(005 x 001) m 16.573 0.0   1   0.0 0.0 16.57316484, 16.57316484 0.73
RIX:CC(017 x 004) m 13.232 0.0   1   0.0 0.0 13.23160847, 13.23160847 0.15
RIX:CC(024 x 023) m 8.2777 0.0   1   0.0 0.0 8.277653658, 8.277653658 -0.71
RIX:CC(041 x 012) m 4.9365 0.0   1   0.0 0.0 4.936539257, 4.936539257 -1.29




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA