Project measure / variable:   Graham1   WNV_IgM_d28

ID, description, units MPD:63364   WNV_IgM_d28   virus-specific IgM in serum, post infection   [ng/mL]  day 28  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure immunoglobulin quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - virus-specific IgM in serum, post infection day 28

RIX:CC(005 x 001)RIX:CC(017 x 004)RIX:CC(041 x 012)RIX:CC(024 x 023)RIX:CC(004 x 011) ng/mL 1416182022242628femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means20.975   ng/mL
Median of the strain means23.539   ng/mL
SD of the strain means± 6.6373
Coefficient of variation (CV)0.3164
Min–max range of strain means13.753   –   28.667   ng/mL
Mean sample size per strain2.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 2 197.5703 98.7851 36.4946 0.001
Residuals 5 13.5342 2.7068


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
RIX:CC(004 x 011) m 13.753 0.74887   3 0.43236 0.0545 12.98497, 14.48117 -1.09
RIX:CC(005 x 001) m 28.667 0.0   1   0.0 0.0 28.66659, 28.66659 1.16
RIX:CC(017 x 004) m 24.641 0.1974   2   0.13958 0.008 24.50146, 24.78062 0.55
RIX:CC(024 x 023) m 14.276 0.0   1   0.0 0.0 14.27629, 14.27629 -1.01
RIX:CC(041 x 012) m 23.539 2.4873   3 1.4361 0.1057 20.77008, 25.58435 0.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 13.7527 0.9499 16.1944 11.3109
RIX:CC(017 x 004) m 24.641 1.1634 27.6316 21.6505
RIX:CC(041 x 012) m 23.5389 0.9499 25.9807 21.0972




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA