Project measure / variable:   Graham1   NS4b_brain_d12

ID, description, units MPD:63354   NS4b_brain_d12   percentage of CD3+ T cells that are NS4b+ in brain, post infection   [%]  day 12  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Graham1 - percentage of CD3+ T cells that are NS4b+ in brain, post infection day 12



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means9.5833   %
Median of the strain means7.69   %
SD of the strain means± 5.1411
Coefficient of variation (CV)0.5365
Min–max range of strain means5.3533   –   17.8   %
Mean sample size per strain2.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 3 60.8901 20.2967 0.9552 0.4647
Residuals 7 148.7465 21.2495


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 11.233 7.0002   3 4.0416 0.6232 3.8, 17.7 0.32
RIX:CC(005 x 001) m 5.84 1.5698   2   1.11 0.2688 4.73, 6.95 -0.73
RIX:CC(017 x 004) m 5.3533 4.3617   3 2.5182 0.8148 2.06, 10.3 -0.82
RIX:CC(024 x 023) m 17.8 0.0   1   0.0 0.0 17.8, 17.8 1.6
RIX:CC(041 x 012) m 7.69 2.2613   3 1.3055 0.2941 6.32, 10.3 -0.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 11.2333 2.6614 17.5266 4.9401
RIX:CC(005 x 001) m 5.84 3.2596 13.5476 -1.8676
RIX:CC(017 x 004) m 5.3533 2.6614 11.6466 -0.9399
RIX:CC(041 x 012) m 7.69 2.6614 13.9833 1.3967




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA