Project measure / variable:   Graham1   CD8_spleen_d28

ID, description, units MPD:63352   CD8_spleen_d28   percentage of CD3+ T cells that are CD8+ in spleen, post infection   [%]  day 28  
West Nile virus study
Data set, strains Graham1   CC RIX   2 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - percentage of CD3+ T cells that are CD8+ in spleen, post infection day 28



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested2 strains
Mean of the strain means35.867   %
Median of the strain means35.867   %
SD of the strain means± 12.304
Coefficient of variation (CV)0.343
Min–max range of strain means27.167   –   44.567   %
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 1 454.14 454.14 11.9626 0.0258
Residuals 4 151.8533 37.9633


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 27.167 8.2585   3 4.7681 0.304 17.8, 33.4 -0.71
RIX:CC(041 x 012) m 44.567 2.7791   3 1.6045 0.0624 41.4, 46.6 0.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 27.1666666667 3.5573085956 37.0433387046 17.2899946287
RIX:CC(041 x 012) m 44.5666666667 3.5573085956 54.4433387046 34.6899946287




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA