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Project measure / variable:   Graham1   CD8_spleen_d21

ID, description, units MPD:63351   CD8_spleen_d21   percentage of CD3+ T cells that are CD8+ in spleen, post infection   [%]  day 21  
West Nile virus study
Data set, strains Graham1   CC RIX   2 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Graham1 - percentage of CD3+ T cells that are CD8+ in spleen, post infection day 21



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested2 strains
Mean of the strain means37.052   %
Median of the strain means37.052   %
SD of the strain means± 20.674
Coefficient of variation (CV)0.558
Min–max range of strain means22.433   –   51.67   %
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 1 1281.8817 1281.8817 27.9928 0.0061
Residuals 4 183.1733 45.7933


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 22.433 1.4572   3 0.8413 0.065 21.4, 24.1 -0.71
RIX:CC(041 x 012) m 51.67 9.4585   3 5.4609 0.1831 43.9, 62.2 0.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 22.4333333333 3.9069738218 33.2808316771 11.5858349896
RIX:CC(041 x 012) m 51.6666666667 3.9069738218 62.5141650104 40.8191683229




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA