Project measure / variable:   Graham1   CD8_spleen_d12

ID, description, units MPD:63350   CD8_spleen_d12   percentage of CD3+ T cells that are CD8+ in spleen, post infection   [%]  day 12  
West Nile virus study
Data set, strains Graham1   CC RIX   2 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - percentage of CD3+ T cells that are CD8+ in spleen, post infection day 12



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested2 strains
Mean of the strain means36.4   %
Median of the strain means36.4   %
SD of the strain means± 15.037
Coefficient of variation (CV)0.4131
Min–max range of strain means25.767   –   47.033   %
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 1 678.4067 678.4067 1433.2535 < 0.0001
Residuals 4 1.8933 0.4733


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 25.767 0.95044   3 0.54874 0.0369 24.8, 26.7 -0.71
RIX:CC(041 x 012) m 47.033 0.20817   3 0.12019 0.0044 46.8, 47.2 0.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 25.7666666667 0.3972125096 26.8695053947 24.6638279387
RIX:CC(041 x 012) m 47.0333333333 0.3972125096 48.1361720613 45.9304946053




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA