Project measure / variable:   Graham1   CD8_spleen_d7

ID, description, units MPD:63349   CD8_spleen_d7   percentage of CD3+ T cells that are CD8+ in spleen, post infection   [%]  day 7  
West Nile virus study
Data set, strains Graham1   CC RIX   2 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - percentage of CD3+ T cells that are CD8+ in spleen, post infection day 7



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested2 strains
Mean of the strain means35.733   %
Median of the strain means35.733   %
SD of the strain means± 11.597
Coefficient of variation (CV)0.3245
Min–max range of strain means27.533   –   43.933   %
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 1 403.44 403.44 5.3861 0.0811
Residuals 4 299.6133 74.9033


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 27.533 12.119   3 6.9967 0.4401 19.8, 41.5 -0.71
RIX:CC(041 x 012) m 43.933 1.7156   3 0.99051 0.0391 42.1, 45.5 0.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 27.5333333333 4.9967767388 41.4066096516 13.660057015
RIX:CC(041 x 012) m 43.9333333333 4.9967767388 57.8066096516 30.060057015




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA