Project measure / variable:   Graham1   CD8_brain_d28

ID, description, units MPD:63348   CD8_brain_d28   percentage of CD3+ T cells that are CD8+ in brain, post infection   [%]  day 28  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - percentage of CD3+ T cells that are CD8+ in brain, post infection day 28



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means44.076   %
Median of the strain means54.07   %
SD of the strain means± 21.432
Coefficient of variation (CV)0.4862
Min–max range of strain means7.71   –   59.5   %
Mean sample size per strain2.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 2 4608.0184 2304.0092 18.7582 0.0026
Residuals 6 736.9609 122.8268


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 57.2 18.52   3 10.693 0.3238 35.9, 69.5 0.61
RIX:CC(005 x 001) m 59.5 0.0   1   0.0 0.0 59.5, 59.5 0.72
RIX:CC(017 x 004) m 7.71 2.2775   3 1.3149 0.2954 6.02, 10.3 -1.7
RIX:CC(024 x 023) m 41.9 0.0   1   0.0 0.0 41.9, 41.9 -0.1
RIX:CC(041 x 012) m 54.07 4.5059   3 2.6015 0.0833 49.7, 58.7 0.47


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 57.2 6.3986 72.8568 41.5432
RIX:CC(017 x 004) m 7.71 6.3986 23.3668 -7.9468
RIX:CC(041 x 012) m 54.0667 6.3986 69.7235 38.4098




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA