Project measure / variable:   Graham1   CD8_brain_d7

ID, description, units MPD:63345   CD8_brain_d7   percentage of CD3+ T cells that are CD8+ in brain, post infection   [%]  day 7  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Graham1 - percentage of CD3+ T cells that are CD8+ in brain, post infection day 7



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means35.612   %
Median of the strain means41.167   %
SD of the strain means± 16.011
Coefficient of variation (CV)0.4496
Min–max range of strain means12.43   –   54.23   %
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 3076.5543 769.1386 15.8001 0.0003
Residuals 10 486.7934 48.6793


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 41.167 10.595   3 6.1173 0.2574 34.9, 53.4 0.35
RIX:CC(005 x 001) m 54.23 4.5391   3 2.6206 0.0837 49.0, 57.1 1.16
RIX:CC(017 x 004) m 12.43 10.086   3 5.8234 0.8115 4.25, 23.7 -1.45
RIX:CC(024 x 023) m 27.7 2.0809   3 1.2014 0.0751 25.3, 29.0 -0.49
RIX:CC(041 x 012) m 42.533 2.1127   3 1.2197 0.0497 40.1, 43.9 0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 41.1667 4.0282 50.1421 32.1913
RIX:CC(005 x 001) m 54.2333 4.0282 63.2087 45.2579
RIX:CC(017 x 004) m 12.43 4.0282 21.4054 3.4546
RIX:CC(024 x 023) m 27.7 4.0282 36.6754 18.7246
RIX:CC(041 x 012) m 42.5333 4.0282 51.5087 33.5579




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA