Project measure / variable:   Shorter3   proportion_m

ID, description, units MPD:62304   proportion_m   proportion of total weaned that are male   [ratio]  
Data set, strains Shorter3   CC diallel w/par   62 strains     sex: f     age: 3wks
Procedure colony observation
Ontology mappings

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  STRAIN COMPARISON PLOT
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Shorter3 - proportion of total weaned that are male



  8-WAY DIALLEL CROSS VIEW
Female animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 0.471 0.550 0.482 0.496 0.406 0.556 0.461 0.551
A ♀ 0.502 0.492 0.529 0.465 0.507 0.433 0.470 0.515
B6 ♀ 0.522 0.562 0.494 0.471 0.564 0.431 0.497 0.423
CAST ♀ 0.534 0.525 0.526 0.496 0.501 0.519 0.493 0.480
NOD ♀ 0.441 0.576 0.521 0.552 0.495 0.513 0.545 0.523
NZO ♀ 0.486 0.462 0.515 — 0.437 0.472 — 0.447
PWK ♀ 0.442 0.480 0.501 0.459 0.438 0.562 0.480 0.455
WSB ♀ 0.534 0.509 0.525 0.522 0.500 0.545 0.495 0.505

Male animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ — — — — — — — —
A ♀ — — — — — — — —
B6 ♀ — — — — — — — —
CAST ♀ — — — — — — — —
NOD ♀ — — — — — — — —
NZO ♀ — — — — — — — —
PWK ♀ — — — — — — — —
WSB ♀ — — — — — — — —

Cell coloring is based on strain mean Z-scores.     High-end         Mid         Low-end           Mouse over the cells to see additional info.


  MEASURE SUMMARY
Measure Summary Female
Number of strains tested62 strains
Mean of the strain means0.498   ratio
Median of the strain means0.498   ratio
SD of the strain means± 0.0395
Coefficient of variation (CV)0.0793
Min–max range of strain means0.406   –   0.576   ratio
Mean sample size per strain66.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 61 3.5296 0.0579 0.9245 0.6426
Residuals 4386 274.5027 0.0626


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.471 0.262   343 0.0142 0.557 -0.68
129SAF1 f 0.55 0.24   29 0.0447 0.437 1.32
129SB6F1 f 0.482 0.191   83 0.021 0.397 -0.4
129SCASTF1 f 0.496 0.237   33 0.0413 0.478 -0.04
129SNODF1 f 0.406 0.209   25 0.0417 0.514 -2.32
129SNZOF1 f 0.556 0.165   27 0.0318 0.297 0.25, 1.0 1.48
129SPWKF1 f 0.461 0.286   35 0.0483 0.62 -0.93
129SWSBF1 f 0.551 0.219   39 0.035 0.397 1.35
A129SF1 f 0.502 0.277   37 0.0455 0.551 0.11
AB6F1 f 0.529 0.261   43 0.0399 0.494 0.79
ACASTF1 f 0.465 0.264   24 0.0538 0.567 -0.83
A/J f 0.492 0.256   198 0.0182 0.521 -0.15
ANODF1 f 0.507 0.182   25 0.0364 0.358 0.23
ANZOF1 f 0.433 0.239   18 0.0564 0.553 -1.64
APWKF1 f 0.47 0.221   26 0.0433 0.469 -0.7
AWSBF1 f 0.515 0.275   35 0.0464 0.534 0.44
B6129SF1/J f 0.522 0.223   83 0.0245 0.428 0.61
B6AF1/J f 0.562 0.222   34 0.0381 0.395 0.143, 1.0 1.63
B6CASTF1 f 0.471 0.215   41 0.0336 0.457 -0.68
B6NODF1 f 0.564 0.194   31 0.0349 0.344 1.68
B6NZOF1 f 0.431 0.238   19 0.0547 0.553 -1.69
B6PWKF1 f 0.497 0.174   63 0.0219 0.35 -0.02
B6WSBF1 f 0.423 0.208   42 0.032 0.491 -1.89
C57BL/6J f 0.494 0.244   438 0.0117 0.494 -0.1
CAST129SF1 f 0.534 0.175   33 0.0305 0.328 0.2, 0.833 0.92
CASTAF1 f 0.525 0.216   34 0.037 0.411 0.143, 1.0 0.69
CASTB6F1 f 0.526 0.262   92 0.0273 0.498 0.72
CAST/EiJ f 0.496 0.263   252 0.0166 0.531 -0.04
CASTNODF1 f 0.501 0.231   33 0.0402 0.461 0.08
CASTNZOF1 f 0.519 0.194   27 0.0373 0.374 0.2, 1.0 0.54
CASTPWKF1 f 0.493 0.242   76 0.0277 0.49 -0.12
CASTWSBF1 f 0.48 0.233   43 0.0355 0.485 -0.45
NOD129SF1 f 0.441 0.27   30 0.0493 0.613 -1.44
NODAF1 f 0.576 0.253   28 0.0478 0.439 1.98
NODB6F1 f 0.521 0.227   52 0.0315 0.435 0.59
NODCASTF1 f 0.552 0.22   36 0.0366 0.398 1.37
NODNZOF1 f 0.513 0.242   22 0.0515 0.471 0.39
NODPWKF1 f 0.545 0.184   37 0.0302 0.337 0.222, 0.889 1.2
NOD/ShiLtJ f 0.495 0.208   213 0.0142 0.419 -0.07
NODWSBF1 f 0.523 0.253   36 0.0421 0.483 0.64
NZO129SF1 f 0.486 0.215   21 0.047 0.443 -0.3
NZOAF1 f 0.462 0.264   21 0.0576 0.571 -0.91
NZOB6F1 f 0.515 0.213   22 0.0453 0.413 0.44
NZO/HlLtJ f 0.472 0.264   142 0.0222 0.561 -0.65
NZONODF1 f 0.437 0.184   29 0.0342 0.422 0.143, 0.8 -1.54
NZOWSBF1 f 0.447 0.206   24 0.042 0.46 -1.29
PWK129SF1 f 0.442 0.256   39 0.041 0.579 -1.41
PWKAF1 f 0.48 0.27   49 0.0386 0.563 -0.45
PWKB6F1 f 0.501 0.276   56 0.0368 0.551 0.08
PWKCASTF1 f 0.459 0.235   58 0.0309 0.513 -0.98
PWKNODF1 f 0.438 0.249   51 0.0349 0.569 -1.51
PWKNZOF1 f 0.562 0.255   26 0.05 0.454 1.63
PWK/PhJ f 0.48 0.255   364 0.0134 0.532 -0.45
PWKWSBF1 f 0.455 0.232   40 0.0367 0.511 -1.08
WSB129SF1 f 0.534 0.249   37 0.0409 0.466 0.92
WSBAF1 f 0.509 0.319   44 0.0481 0.627 0.28
WSBB6F1 f 0.525 0.258   47 0.0377 0.491 0.69
WSBCASTF1 f 0.522 0.277   66 0.0342 0.531 0.61
WSB/EiJ f 0.505 0.307   341 0.0166 0.608 0.18
WSBNODF1 f 0.5 0.201   39 0.0322 0.402 0.06
WSBNZOF1 f 0.545 0.24   30 0.0437 0.439 1.2
WSBPWKF1 f 0.495 0.282   87 0.0303 0.57 -0.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.4709 0.0135 0.4973 0.4444
129SAF1 f 0.5499 0.0465 0.641 0.4588
129SB6F1 f 0.4817 0.0275 0.5355 0.4279
129SCASTF1 f 0.496 0.0435 0.5814 0.4106
129SNODF1 f 0.406 0.05 0.5041 0.3079
129SNZOF1 f 0.5563 0.0481 0.6506 0.4619
129SPWKF1 f 0.4612 0.0423 0.5441 0.3783
129SWSBF1 f 0.5508 0.0401 0.6294 0.4723
A129SF1 f 0.5021 0.0411 0.5827 0.4214
AB6F1 f 0.5289 0.0382 0.6037 0.4541
ACASTF1 f 0.4653 0.0511 0.5654 0.3652
A/J f 0.4918 0.0178 0.5267 0.457
ANODF1 f 0.5074 0.05 0.6055 0.4093
ANZOF1 f 0.4329 0.059 0.5485 0.3173
APWKF1 f 0.4704 0.0491 0.5666 0.3742
AWSBF1 f 0.5145 0.0423 0.5974 0.4316
B6129SF1/J f 0.522 0.0275 0.5758 0.4681
B6AF1/J f 0.5624 0.0429 0.6465 0.4783
B6CASTF1 f 0.4705 0.0391 0.5471 0.3939
B6NODF1 f 0.5643 0.0449 0.6523 0.4762
B6NZOF1 f 0.4309 0.0574 0.5435 0.3184
B6PWKF1 f 0.4965 0.0315 0.5583 0.4347
B6WSBF1 f 0.4233 0.0386 0.4989 0.3476
C57BL/6J f 0.4938 0.012 0.5172 0.4704
CAST129SF1 f 0.5338 0.0435 0.6192 0.4484
CASTAF1 f 0.5249 0.0429 0.609 0.4408
CASTB6F1 f 0.5258 0.0261 0.5769 0.4747
CAST/EiJ f 0.4958 0.0158 0.5267 0.465
CASTNODF1 f 0.5013 0.0435 0.5867 0.4159
CASTNZOF1 f 0.5191 0.0481 0.6135 0.4248
CASTPWKF1 f 0.4931 0.0287 0.5493 0.4368
CASTWSBF1 f 0.48 0.0382 0.5548 0.4052
NOD129SF1 f 0.4405 0.0457 0.53 0.351
NODAF1 f 0.5762 0.0473 0.6689 0.4835
NODB6F1 f 0.5215 0.0347 0.5895 0.4535
NODCASTF1 f 0.5517 0.0417 0.6335 0.47
NODNZOF1 f 0.5134 0.0533 0.618 0.4088
NODPWKF1 f 0.545 0.0411 0.6256 0.4643
NOD/ShiLtJ f 0.4954 0.0171 0.529 0.4618
NODWSBF1 f 0.5227 0.0417 0.6045 0.441
NZO129SF1 f 0.4859 0.0546 0.5929 0.3788
NZOAF1 f 0.4625 0.0546 0.5695 0.3554
NZOB6F1 f 0.5151 0.0533 0.6197 0.4106
NZO/HlLtJ f 0.4719 0.021 0.513 0.4307
NZONODF1 f 0.4371 0.0465 0.5282 0.346
NZOWSBF1 f 0.4474 0.0511 0.5475 0.3473
PWK129SF1 f 0.4418 0.0401 0.5204 0.3633
PWKAF1 f 0.4795 0.0357 0.5496 0.4095
PWKB6F1 f 0.5007 0.0334 0.5662 0.4351
PWKCASTF1 f 0.4586 0.0328 0.523 0.3942
PWKNODF1 f 0.4382 0.035 0.5069 0.3695
PWKNZOF1 f 0.5616 0.0491 0.6578 0.4654
PWK/PhJ f 0.4796 0.0131 0.5053 0.4539
PWKWSBF1 f 0.4547 0.0396 0.5323 0.3772
WSB129SF1 f 0.5344 0.0411 0.615 0.4537
WSBAF1 f 0.5091 0.0377 0.583 0.4351
WSBB6F1 f 0.5254 0.0365 0.597 0.4539
WSBCASTF1 f 0.5224 0.0308 0.5828 0.4621
WSB/EiJ f 0.5047 0.0135 0.5313 0.4782
WSBNODF1 f 0.5005 0.0401 0.579 0.4219
WSBNZOF1 f 0.5454 0.0457 0.6349 0.4558
WSBPWKF1 f 0.4953 0.0268 0.5478 0.4427




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA