Project measure / variable:   CSNA02   reward_latency_rev

ID, description, units MPD:62217   reward_latency_rev   latency to receive Boost divided by total number of trials   [s]  reversal  
Data set, strains CSNA02   inbred   10 strains     sex: both     age: 12-14wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA02 - latency to receive Boost divided by total number of trials reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means7.4575   s 6.8874   s
Median of the strain means6.912   s 6.7311   s
SD of the strain means± 1.6428 ± 0.79606
Coefficient of variation (CV)0.2203 0.1156
Min–max range of strain means6.0405   –   11.919   s 5.865   –   8.9628   s
Mean sample size per strain5.3   mice 4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 5.1565 5.1565 0.6336 0.4284
strain 9 53.0737 5.8971 0.7246 0.685
sex:strain 9 102.4589 11.3843 1.3988 0.203
Residuals 79 642.9389 8.1385


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 6.8992 0.60926   6 0.24873 0.0883 6.6, 8.137 -0.34
129S1/SvImJ m 6.8137 0.40665   6 0.16601 0.0597 6.469, 7.513 -0.09
A/J f 6.9248 1.653   6 0.67484 0.2387 4.442, 9.311 -0.32
A/J m 8.9628 3.9456   6 1.6108 0.4402 6.6, 16.771 2.61
C57BL/6J f 6.824 0.44497   6 0.18166 0.0652 6.6, 7.723 -0.39
C57BL/6J m 6.806 0.23259   6 0.09495 0.0342 6.6, 7.139 -0.1
CAST/EiJ f 6.6744 0.11309   7 0.04274 0.0169 6.6, 6.898 -0.48
CAST/EiJ m 6.6562 0.06532   4 0.03266 0.0098 6.6, 6.721 -0.29
CC004/TauUncJ f 6.6075 0.01061   2   0.0075 0.0016 6.6, 6.615 -0.52
CC004/TauUncJ m 6.628 0.0485   3 0.028 0.0073 6.6, 6.684 -0.33
CC041/TauUncJ f 7.6473 1.7804   3 1.0279 0.2328 6.6, 9.703 0.12
CC041/TauUncJ m 6.6 0.0   2   0.0 0.0 6.6, 6.6 -0.36
NOD/ShiLtJ f 11.919 11.01   5 4.9239 0.9238 6.6, 31.583 2.72
NOD/ShiLtJ m 5.865 2.5825   5 1.1549 0.4403 1.399, 8.126 -1.28
NZO/HlLtJ f 7.5369 1.0189   7 0.38511 0.1352 6.765, 9.726 0.05
NZO/HlLtJ m 7.1205 0.86599   4 0.43299 0.1216 6.6, 8.416 0.29
PWK/PhJ f 6.0405 1.4356   6 0.58609 0.2377 3.112, 6.731 -0.86
PWK/PhJ m 6.6138 0.03388   6 0.01383 0.0051 6.6, 6.683 -0.34
WSB/EiJ f 7.501 1.6191   5 0.72406 0.2158 6.6, 10.373 0.03
WSB/EiJ m 6.8085 0.26345   4 0.13172 0.0387 6.6, 7.148 -0.1


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 6.8992 1.1647 9.2173 4.581
129S1/SvImJ m 6.8137 1.1647 9.1318 4.4955
A/J f 6.9248 1.1647 9.243 4.6067
A/J m 8.9628 1.1647 11.281 6.6447
C57BL/6J f 6.824 1.1647 9.1422 4.5058
C57BL/6J m 6.806 1.1647 9.1242 4.4878
CAST/EiJ f 6.6744 1.0783 8.8206 4.5282
CAST/EiJ m 6.6563 1.4264 9.4954 3.8171
CC004/TauUncJ f 6.6075 2.0172 10.6227 2.5923
CC004/TauUncJ m 6.628 1.6471 9.9064 3.3496
CC041/TauUncJ f 7.6473 1.6471 10.9257 4.3689
CC041/TauUncJ m 6.6 2.0172 10.6152 2.5848
NOD/ShiLtJ f 11.9186 1.2758 14.458 9.3792
NOD/ShiLtJ m 5.865 1.2758 8.4044 3.3256
NZO/HlLtJ f 7.5369 1.0783 9.6831 5.3906
NZO/HlLtJ m 7.1205 1.4264 9.9597 4.2813
PWK/PhJ f 6.0405 1.1647 8.3587 3.7223
PWK/PhJ m 6.6138 1.1647 8.932 4.2957
WSB/EiJ f 7.501 1.2758 10.0404 4.9616
WSB/EiJ m 6.8085 1.4264 9.6477 3.9693


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 6.8564 0.8235 8.4956 5.2172
A/J both 7.9438 0.8235 9.583 6.3046
C57BL/6J both 6.815 0.8235 8.4542 5.1758
CAST/EiJ both 6.6653 0.894 8.4449 4.8858
CC004/TauUncJ both 6.6178 1.3021 9.2096 4.0259
CC041/TauUncJ both 7.1237 1.3021 9.7155 4.5319
NOD/ShiLtJ both 8.8918 0.9021 10.6875 7.0961
NZO/HlLtJ both 7.3287 0.894 9.1082 5.5491
PWK/PhJ both 6.3272 0.8235 7.9664 4.688
WSB/EiJ both 7.1548 0.9569 9.0593 5.2502




  GWAS USING LINEAR MIXED MODELS