Project measure / variable:   CSNA02   reward_latency_acq

ID, description, units MPD:62216   reward_latency_acq   latency to receive Boost divided by total number of trials   [s]  acquisition  
Data set, strains CSNA02   inbred   10 strains     sex: both     age: 12-14wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA02 - latency to receive Boost divided by total number of trials acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means6.91   s 7.4161   s
Median of the strain means6.8148   s 6.827   s
SD of the strain means± 0.3326 ± 1.7692
Coefficient of variation (CV)0.0481 0.2386
Min–max range of strain means6.624   –   7.6937   s 6.6033   –   12.391   s
Mean sample size per strain5.3   mice 4.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.2462 4.2462 0.7809 0.3795
strain 9 70.2243 7.8027 1.4349 0.1874
sex:strain 9 49.8106 5.5345 1.0178 0.4332
Residuals 80 435.0264 5.4378


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 6.8348 0.32763   6 0.13375 0.0479 6.6, 7.31 -0.23
129S1/SvImJ m 7.1347 0.79851   6 0.32599 0.1119 6.6, 8.477 -0.16
A/J f 7.2615 1.0014   6 0.40884 0.1379 6.6, 9.051 1.06
A/J m 7.4688 1.9453   6 0.79417 0.2605 5.191, 10.421 0.03
C57BL/6J f 6.6928 0.04131   6 0.01686 0.0062 6.622, 6.744 -0.65
C57BL/6J m 6.6765 0.11944   6 0.04876 0.0179 6.6, 6.853 -0.42
CAST/EiJ f 6.7689 0.91543   7 0.346 0.1352 5.452, 8.559 -0.42
CAST/EiJ m 6.9707 0.42454   4 0.21227 0.0609 6.6, 7.58 -0.25
CC004/TauUncJ f 6.624 0.03394   2   0.024 0.0051 6.6, 6.648 -0.86
CC004/TauUncJ m 6.7707 0.21058   3 0.12158 0.0311 6.6, 7.006 -0.36
CC041/TauUncJ f 6.819 0.37932   3 0.219 0.0556 6.6, 7.257 -0.27
CC041/TauUncJ m 6.6033 0.0057735   3 0.00333333 0.0009 6.6, 6.61 -0.46
NOD/ShiLtJ f 6.6246 0.05501   5 0.0246 0.0083 6.6, 6.723 -0.86
NOD/ShiLtJ m 6.6058 0.04279   5 0.01913 0.0065 6.575, 6.679 -0.46
NZO/HlLtJ f 7.6937 1.1695   7 0.44203 0.152 6.638, 9.982 2.36
NZO/HlLtJ m 12.391 11.406   4 5.7029 0.9205 6.6, 29.499 2.81
PWK/PhJ f 6.8105 0.32592   6 0.13306 0.0479 6.6, 7.3 -0.3
PWK/PhJ m 6.8832 0.51952   6 0.21209 0.0755 6.6, 7.906 -0.3
WSB/EiJ f 6.9706 0.48165   5 0.2154 0.0691 6.684, 7.809 0.18
WSB/EiJ m 6.6567 0.08562   4 0.04281 0.0129 6.6, 6.781 -0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 6.8348 0.952 8.7294 4.9403
129S1/SvImJ m 7.1347 0.952 9.0292 5.2401
A/J f 7.2615 0.952 9.156 5.367
A/J m 7.4688 0.952 9.3634 5.5743
C57BL/6J f 6.6928 0.952 8.5874 4.7983
C57BL/6J m 6.6765 0.952 8.571 4.782
CAST/EiJ f 6.7689 0.8814 8.5229 5.0149
CAST/EiJ m 6.9707 1.166 9.2911 4.6504
CC004/TauUncJ f 6.624 1.6489 9.9054 3.3426
CC004/TauUncJ m 6.7707 1.3463 9.45 4.0914
CC041/TauUncJ f 6.819 1.3463 9.4983 4.1397
CC041/TauUncJ m 6.6033 1.3463 9.2826 3.924
NOD/ShiLtJ f 6.6246 1.0429 8.7 4.5492
NOD/ShiLtJ m 6.6058 1.0429 8.6812 4.5304
NZO/HlLtJ f 7.6937 0.8814 9.4477 5.9397
NZO/HlLtJ m 12.3907 1.166 14.7111 10.0704
PWK/PhJ f 6.8105 0.952 8.705 4.916
PWK/PhJ m 6.8832 0.952 8.7777 4.9886
WSB/EiJ f 6.9706 1.0429 9.046 4.8952
WSB/EiJ m 6.6567 1.166 8.9771 4.3364


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 6.9848 0.6732 8.3244 5.6451
A/J both 7.3652 0.6732 8.7048 6.0255
C57BL/6J both 6.6847 0.6732 8.0243 5.345
CAST/EiJ both 6.8698 0.7308 8.3241 5.4155
CC004/TauUncJ both 6.6973 1.0644 8.8155 4.5792
CC041/TauUncJ both 6.7112 0.952 8.6057 4.8166
NOD/ShiLtJ both 6.6152 0.7374 8.0827 5.1477
NZO/HlLtJ both 10.0422 0.7308 11.4966 8.5879
PWK/PhJ both 6.8468 0.6732 8.1865 5.5072
WSB/EiJ both 6.8137 0.7821 8.3702 5.2572




  GWAS USING LINEAR MIXED MODELS