Project measure / variable:   CSNA02   trials_acq

ID, description, units MPD:62206   trials_acq   total number of trials in reversal learning needed to meet criteria   [n]  acquisition  
Data set, strains CSNA02   inbred   10 strains     sex: both     age: 12-14wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA02 - total number of trials in reversal learning needed to meet criteria acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means91.81   n 95.22   n
Median of the strain means81.5   n 91.91   n
SD of the strain means± 28.945 ± 36.33
Coefficient of variation (CV)0.3153 0.3815
Min–max range of strain means54.33   –   149.5   n 58.17   –   180.7   n
Mean sample size per strain5.3   mice 4.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 350.6532 350.6532 0.103 0.7491
strain 9 53956.9209 5995.2134 1.7607 0.0889
sex:strain 9 15787.9454 1754.2162 0.5152 0.8595
Residuals 80 272403.2405 3405.0405


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 82.5 28.19   6 11.509 0.3417 43.0, 131.0 -0.32
129S1/SvImJ m 76.17 47.537   6 19.407 0.6241 28.0, 139.0 -0.52
A/J f 79.33 53.36   6 21.783 0.6726 20.0, 169.0 -0.43
A/J m 123.0 74.24   6 30.307 0.6036 64.0, 266.0 0.76
C57BL/6J f 80.5 51.33   6 20.954 0.6376 20.0, 172.0 -0.39
C57BL/6J m 58.17 54.96   6 22.437 0.9449 20.0, 131.0 -1.02
CAST/EiJ f 93.14 44.021   7 16.638 0.4726 23.0, 138.0 0.05
CAST/EiJ m 103.8 31.127   4 15.564 0.3 81.0, 148.0 0.24
CC004/TauUncJ f 149.5 161.9   2   114.5 1.0831 35.0, 264.0 1.99
CC004/TauUncJ m 180.7 111.4   3 64.32 0.6166 83.0, 302.0 2.35
CC041/TauUncJ f 54.33 21.502   3 12.414 0.3957 33.0, 76.0 -1.29
CC041/TauUncJ m 67.33 65.68   3 37.922 0.9755 25.0, 143.0 -0.77
NOD/ShiLtJ f 67.6 63.63   5 28.455 0.9412 20.0, 165.0 -0.84
NOD/ShiLtJ m 98.2 78.21   5 34.976 0.7964 20.0, 221.0 0.08
NZO/HlLtJ f 76.0 22.723   7 8.5885 0.299 44.0, 102.0 -0.55
NZO/HlLtJ m 61.0 47.784   4 23.892 0.7833 20.0, 129.0 -0.94
PWK/PhJ f 106.0 84.38   6 34.446 0.796 20.0, 247.0 0.49
PWK/PhJ m 94.33 59.51   6 24.295 0.6309 41.0, 190.0 -0.02
WSB/EiJ f 129.2 33.581   5 15.018 0.2599 86.0, 168.0 1.29
WSB/EiJ m 89.5 34.23   4 17.115 0.3825 40.0, 118.0 -0.16


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 82.5 23.8224 129.9081 35.0919
129S1/SvImJ m 76.1667 23.8224 123.5748 28.7586
A/J f 79.3333 23.8224 126.7414 31.9252
A/J m 123.0 23.8224 170.4081 75.5919
C57BL/6J f 80.5 23.8224 127.9081 33.0919
C57BL/6J m 58.1667 23.8224 105.5748 10.7586
CAST/EiJ f 93.1429 22.0553 137.0342 49.2515
CAST/EiJ m 103.75 29.1764 161.8128 45.6872
CC004/TauUncJ f 149.5 41.2616 231.6132 67.3868
CC004/TauUncJ m 180.6667 33.69 247.7118 113.6215
CC041/TauUncJ f 54.3333 33.69 121.3785 -12.7118
CC041/TauUncJ m 67.3333 33.69 134.3785 0.2882
NOD/ShiLtJ f 67.6 26.0961 119.533 15.667
NOD/ShiLtJ m 98.2 26.0961 150.133 46.267
NZO/HlLtJ f 76.0 22.0553 119.8914 32.1086
NZO/HlLtJ m 61.0 29.1764 119.0628 2.9372
PWK/PhJ f 106.0 23.8224 153.4081 58.5919
PWK/PhJ m 94.3333 23.8224 141.7414 46.9252
WSB/EiJ f 129.2 26.0961 181.133 77.267
WSB/EiJ m 89.5 29.1764 147.5628 31.4372


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 79.3333 16.845 112.8559 45.8108
A/J both 101.1667 16.845 134.6892 67.6441
C57BL/6J both 69.3333 16.845 102.8559 35.8108
CAST/EiJ both 98.4464 18.2873 134.8392 62.0536
CC004/TauUncJ both 165.0833 26.6343 218.0872 112.0795
CC041/TauUncJ both 60.8333 23.8224 108.2414 13.4252
NOD/ShiLtJ both 82.9 18.4528 119.6221 46.1779
NZO/HlLtJ both 68.5 18.2873 104.8928 32.1072
PWK/PhJ both 100.1667 16.845 133.6892 66.6441
WSB/EiJ both 109.35 19.5721 148.2997 70.4003




  GWAS USING LINEAR MIXED MODELS