Project measure / variable:   Crusio1   groom_bout

ID, description, units MPD:62015   groom_bout   mean duration of grooming bouts, 20 min test   [s]  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-12wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Crusio1 - mean duration of grooming bouts, 20 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means9.2693   s 9.004   s
Median of the strain means8.0437   s 7.5389   s
SD of the strain means± 4.9246 ± 5.0747
Coefficient of variation (CV)0.5313 0.5636
Min–max range of strain means2.7556   –   31.68   s 3.1538   –   33.1   s
Mean sample size per strain8.4   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 13.9924 13.9924 0.1876 0.665
strain 52 14988.3665 288.2378 3.8647 < 0.0001
sex:strain 52 4841.6156 93.108 1.2484 0.1169
Residuals 804 59964.5279 74.5827


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 4.5227 2.7963   2   1.9773 0.6183 2.545454546, 6.5 -0.96
BXD1 m 5.881 2.054   2   1.4524 0.3493 4.428571429, 7.333333333 -0.62
BXD100 f 11.468 5.6731   10 1.794 0.4947 4.84, 24.0 0.45
BXD100 m 12.506 6.5599   10 2.0744 0.5246 4.795, 27.86666667 0.69
BXD101 f 16.488 12.055   6 4.9215 0.7311 3.621333333, 34.9 1.47
BXD101 m 9.0382 7.3693   8 2.6054 0.8154 0.249302326, 21.28 0.01
BXD102 f 4.3973 1.9406   10 0.61368 0.4413 -0.99
BXD102 m 3.2775 1.9842   10 0.62745 0.6054 0.24, 6.992 -1.13
BXD11 f 17.634 9.0684   10 2.8677 0.5143 7.582857143, 36.49333333 1.7
BXD11 m 33.1 39.717   10 12.56 1.1999 7.75, 141.92 4.75
BXD13 f 6.694 6.1357   10 1.9403 0.9166 2.09, 22.92 -0.52
BXD13 m 6.8805 4.6074   10 1.457 0.6696 -0.42
BXD14 f 11.827 4.9566   10 1.5674 0.4191 5.185, 21.72571429 0.52
BXD14 m 9.8049 7.6186   10 2.4092 0.777 3.893333333, 30.464 0.16
BXD15 f 10.97 7.3857   10 2.3356 0.6733 1.44, 27.37333333 0.35
BXD15 m 5.9511 1.636   10 0.51734 0.2749 3.146666667, 8.29 -0.6
BXD16 f 4.3901 1.1598   10 0.36675 0.2642 2.765, 5.924444444 -0.99
BXD16 m 6.1967 3.9642   10 1.2536 0.6397 0.7, 13.06666667 -0.55
BXD18 f 2.7556 0.91138   2   0.64444 0.3307 2.111111111, 3.4 -1.32
BXD18 m 3.6635 0.58472   2   0.41346 0.1596 3.25, 4.076923077 -1.05
BXD19 f 2.9937 0.274   2   0.19375 0.0915 2.8, 3.1875 -1.27
BXD19 m 5.1375 2.139   2   1.5125 0.4163 3.625, 6.65 -0.76
BXD2 f 12.094 10.241   10 3.2384 0.8467 4.4, 37.504 0.57
BXD2 m 6.851 5.2819   10 1.6703 0.771 2.626666667, 20.0 -0.42
BXD21 f 5.875 4.0093   10 1.2678 0.6824 2.501818182, 15.744 -0.69
BXD21 m 5.3712 2.9145   10 0.92164 0.5426 1.36, 11.12 -0.72
BXD27 f 15.253 21.802   10 6.8945 1.4294 1.22
BXD27 m 13.851 9.0674   10 2.8674 0.6547 0.96
BXD28 f 7.8183 3.0447   10 0.96281 0.3894 4.647058824, 15.02222222 -0.29
BXD28 m 16.712 8.309   10 2.6275 0.4972 8.364444444, 35.50666667 1.52
BXD31 f 11.424 6.4871   10 2.0514 0.5679 5.736842105, 27.84 0.44
BXD31 m 11.529 5.8649   10 1.8546 0.5087 5.76, 25.125 0.5
BXD32 f 6.0003 1.7391   10 0.54995 0.2898 4.090909091, 9.746666667 -0.66
BXD32 m 5.8319 4.0835   10 1.2913 0.7002 -0.63
BXD33 f 5.0 0.0   1   0.0 0.0 5.0, 5.0 -0.87
BXD33 m 3.1538 0.0   1   0.0 0.0 3.153846154, 3.153846154 -1.15
BXD34 f 31.68 28.438   2   20.109 0.8977 11.57142857, 51.78947368 4.55
BXD34 m 4.7437 0.44566   2   0.31513 0.0939 4.428571429, 5.058823529 -0.84
BXD39 f 9.6289 6.8635   10 2.1704 0.7128 2.8125, 22.1 0.07
BXD39 m 13.899 7.6955   10 2.4335 0.5537 6.5, 30.26666667 0.96
BXD40 f 5.7023 2.3559   10 0.745 0.4131 2.56, 10.432 -0.72
BXD40 m 5.1607 1.9763   10 0.62496 0.383 3.083333333, 8.48 -0.76
BXD42 f 7.8588 4.82   10 1.5242 0.6133 2.533333333, 18.064 -0.29
BXD42 m 21.489 38.776   10 12.262 1.8044 3.68, 131.44 2.46
BXD43 f 16.356 8.4419   10 2.6696 0.5161 4.974117647, 32.10666667 1.44
BXD43 m 16.021 6.6029   10 2.088 0.4122 7.52, 23.96571429 1.38
BXD44 f 7.7995 2.8553   10 0.90294 0.3661 4.651428571, 13.6 -0.3
BXD44 m 9.9023 4.5146   10 1.4276 0.4559 6.24, 21.52 0.18
BXD48 f 6.7529 3.0927   10 0.97801 0.458 4.86, 15.088 -0.51
BXD48 m 6.5484 2.3599   10 0.74626 0.3604 4.32, 11.86666667 -0.48
BXD49 f 8.0511 4.0292   10 1.2741 0.5004 3.52, 15.25333333 -0.25
BXD49 m 9.4342 4.8278   10 1.5267 0.5117 3.43, 19.57333333 0.08
BXD50 f 5.9566 2.6674   10 0.84351 0.4478 2.68, 10.76 -0.67
BXD50 m 4.7789 4.169   10 1.3184 0.8724 -0.83
BXD51 f 9.6455 9.9612   10 3.15 1.0327 2.78, 36.96 0.08
BXD51 m 10.462 5.0071   10 1.5834 0.4786 0.86, 19.59 0.29
BXD6 f 14.796 14.969   10 4.7337 1.0117 3.017142857, 55.31636364 1.12
BXD6 m 14.554 15.018   10 4.7491 1.0319 3.93, 43.57333333 1.09
BXD61 f 10.743 3.6153   10 1.1433 0.3365 6.79, 19.15 0.3
BXD61 m 7.9561 4.4035   10 1.3925 0.5535 4.471111111, 19.97 -0.21
BXD62 f 8.4017 3.5144   10 1.1114 0.4183 4.24, 14.16 -0.18
BXD62 m 11.345 6.0669   10 1.9185 0.5348 3.622857143, 20.98 0.46
BXD65 f 4.9387 3.9998   6 1.6329 0.8099 -0.88
BXD65 m 4.814 1.6537   10 0.52293 0.3435 3.04, 8.46 -0.83
BXD66 f 12.767 4.581   4 2.2905 0.3588 6.066666667, 16.21 0.71
BXD66 m 6.6894 2.5262   4 1.2631 0.3776 3.92, 9.490909091 -0.46
BXD68 f 7.5671 5.4893   4 2.7447 0.7254 2.112, 14.768 -0.35
BXD68 m 5.8682 1.1977   6 0.48895 0.2041 4.218181818, 7.422222222 -0.62
BXD69 f 5.9125 3.5407   10 1.1197 0.5989 2.246956522, 11.472 -0.68
BXD69 m 6.6069 4.9961   10 1.5799 0.7562 -0.47
BXD70 f 5.6727 2.3947   10 0.75726 0.4221 2.6, 10.25333333 -0.73
BXD70 m 4.652 7.456   10 2.3578 1.6028 -0.86
BXD71 m 10.672 4.254   2   3.008 0.3986 7.664, 13.68 0.33
BXD73 f 7.1117 2.367   10 0.74851 0.3328 4.04, 11.16 -0.44
BXD73 m 5.7978 2.4042   10 0.76029 0.4147 4.08, 11.84 -0.63
BXD75 f 6.8399 2.7331   10 0.86427 0.3996 3.04, 11.52 -0.49
BXD75 m 8.1572 4.4665   10 1.4124 0.5476 1.8, 17.32571429 -0.17
BXD77 f 9.2131 6.1967   4 3.0983 0.6726 2.249411765, 17.216 -0.01
BXD77 m 6.2983 1.5401   4 0.77005 0.2445 4.32, 8.02 -0.53
BXD8 f 14.548 13.051   10 4.1271 0.8971 4.556, 43.28 1.07
BXD8 m 11.164 2.8423   10 0.89882 0.2546 6.102857143, 15.46666667 0.43
BXD80 f 11.447 5.0175   10 1.5867 0.4383 6.88, 20.224 0.44
BXD80 m 7.5389 4.49   10 1.4198 0.5956 2.47, 18.77 -0.29
BXD81 f 7.0093 6.2016   10 1.9611 0.8848 2.76, 24.08 -0.46
BXD81 m 6.6732 3.3455   10 1.0579 0.5013 0.88, 12.13 -0.46
BXD84 f 13.556 4.5953   10 1.4532 0.339 4.78, 20.2 0.87
BXD84 m 11.68 7.0216   10 2.2204 0.6012 5.093333333, 27.24 0.53
BXD85 f 5.1117 1.8896   4 0.9448 0.3697 2.906666667, 7.36 -0.84
BXD85 m 5.9826 1.9299   4 0.96493 0.3226 3.657142857, 8.053333333 -0.6
BXD86 f 5.8617 2.7457   10 0.86827 0.4684 -0.69
BXD86 m 7.8979 2.4268   10 0.76741 0.3073 4.176, 11.92 -0.22
BXD87 f 9.4593 3.4872   10 1.1028 0.3687 4.32, 15.088 0.04
BXD87 m 12.764 8.4265   10 2.6647 0.6602 4.64, 25.112 0.74
BXD89 f 11.0 10.871   10 3.4376 0.9882 2.08, 35.36 0.35
BXD89 m 7.5822 5.8909   10 1.8629 0.7769 1.608888889, 18.21333333 -0.28
BXD90 f 4.3109 1.2151   6 0.49608 0.2819 2.422857143, 5.536 -1.01
BXD90 m 6.4128 1.5173   6 0.61942 0.2366 4.066666667, 8.14 -0.51
BXD92 f 9.528 5.555   2   3.928 0.583 5.6, 13.456 0.05
BXD92 m 9.1889 3.0146   3 1.7405 0.3281 7.226666667, 12.66 0.04
BXD96 f 8.0364 3.0819   10 0.97458 0.3835 2.898461539, 12.52 -0.25
BXD96 m 8.0906 4.7348   10 1.4973 0.5852 -0.18
BXD97 f 9.4004 5.3506   10 1.692 0.5692 2.654545455, 21.30666667 0.03
BXD97 m 16.189 8.0549   10 2.5472 0.4976 7.786666667, 28.4 1.42
BXD98 f 11.249 6.8206   6 2.7845 0.6063 2.893333333, 21.18666667 0.4
BXD98 m 6.1283 1.8681   7 0.70609 0.3048 3.92, 8.72 -0.57
C57BL/6J f 2.7745 2.3116   10 0.731 0.8332 -1.32
C57BL/6J m 5.5503 3.6974   10 1.1692 0.6662 2.57, 14.04 -0.68
DBA/2J f 16.248 9.5501   10 3.02 0.5878 3.84, 36.48888889 1.42
DBA/2J m 11.793 5.4338   10 1.7183 0.4608 2.845714286, 20.64 0.55


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 4.5227 6.1067 16.5096 -7.4642
BXD1 m 5.881 6.1067 17.8678 -6.1059
BXD100 f 11.4682 2.731 16.8289 6.1075
BXD100 m 12.5056 2.731 17.8663 7.1449
BXD101 f 16.4884 3.5257 23.4091 9.5678
BXD101 m 9.0382 3.0533 15.0316 3.0447
BXD102 f 4.3973 2.731 9.758 -0.9634
BXD102 m 3.2775 2.731 8.6382 -2.0832
BXD11 f 17.6337 2.731 22.9944 12.273
BXD11 m 33.1003 2.731 38.461 27.7396
BXD13 f 6.694 2.731 12.0547 1.3333
BXD13 m 6.8805 2.731 12.2412 1.5198
BXD14 f 11.8273 2.731 17.188 6.4666
BXD14 m 9.8049 2.731 15.1656 4.4442
BXD15 f 10.9695 2.731 16.3302 5.6088
BXD15 m 5.9511 2.731 11.3118 0.5904
BXD16 f 4.3901 2.731 9.7508 -0.9706
BXD16 m 6.1967 2.731 11.5574 0.836
BXD18 f 2.7556 6.1067 14.7424 -9.2313
BXD18 m 3.6635 6.1067 15.6504 -8.3234
BXD19 f 2.9937 6.1067 14.9806 -8.9931
BXD19 m 5.1375 6.1067 17.1244 -6.8494
BXD2 f 12.0944 2.731 17.4551 6.7337
BXD2 m 6.851 2.731 12.2117 1.4903
BXD21 f 5.875 2.731 11.2357 0.5143
BXD21 m 5.3712 2.731 10.7319 0.0105
BXD27 f 15.253 2.731 20.6137 9.8923
BXD27 m 13.8507 2.731 19.2114 8.49
BXD28 f 7.8183 2.731 13.179 2.4576
BXD28 m 16.7122 2.731 22.0729 11.3515
BXD31 f 11.4238 2.731 16.7845 6.0631
BXD31 m 11.5289 2.731 16.8896 6.1682
BXD32 f 6.0003 2.731 11.361 0.6396
BXD32 m 5.8319 2.731 11.1926 0.4712
BXD34 f 31.6805 6.1067 43.6673 19.6936
BXD34 m 4.7437 6.1067 16.7306 -7.2432
BXD39 f 9.6289 2.731 14.9896 4.2682
BXD39 m 13.899 2.731 19.2597 8.5383
BXD40 f 5.7023 2.731 11.063 0.3416
BXD40 m 5.1607 2.731 10.5214 -0.2
BXD42 f 7.8588 2.731 13.2195 2.4981
BXD42 m 21.4895 2.731 26.8502 16.1288
BXD43 f 16.3564 2.731 21.7171 10.9957
BXD43 m 16.0205 2.731 21.3812 10.6598
BXD44 f 7.7995 2.731 13.1602 2.4388
BXD44 m 9.9023 2.731 15.263 4.5416
BXD48 f 6.7529 2.731 12.1136 1.3922
BXD48 m 6.5484 2.731 11.9091 1.1877
BXD49 f 8.0511 2.731 13.4118 2.6904
BXD49 m 9.4342 2.731 14.7949 4.0735
BXD50 f 5.9566 2.731 11.3173 0.5959
BXD50 m 4.7789 2.731 10.1396 -0.5818
BXD51 f 9.6455 2.731 15.0062 4.2848
BXD51 m 10.462 2.731 15.8227 5.1013
BXD6 f 14.7957 2.731 20.1564 9.435
BXD6 m 14.5538 2.731 19.9145 9.1931
BXD61 f 10.7431 2.731 16.1038 5.3824
BXD61 m 7.9561 2.731 13.3168 2.5954
BXD62 f 8.4017 2.731 13.7624 3.041
BXD62 m 11.3445 2.731 16.7052 5.9838
BXD65 f 4.9387 3.5257 11.8593 -1.9819
BXD65 m 4.814 2.731 10.1747 -0.5467
BXD66 f 12.7673 4.3181 21.2433 4.2913
BXD66 m 6.6894 4.3181 15.1654 -1.7866
BXD68 f 7.5671 4.3181 16.0432 -0.9089
BXD68 m 5.8682 3.5257 12.7888 -1.0524
BXD69 f 5.9125 2.731 11.2732 0.5518
BXD69 m 6.6069 2.731 11.9676 1.2462
BXD70 f 5.6727 2.731 11.0334 0.312
BXD70 m 4.652 2.731 10.0127 -0.7087
BXD73 f 7.1117 2.731 12.4724 1.751
BXD73 m 5.7978 2.731 11.1585 0.4371
BXD75 f 6.8399 2.731 12.2006 1.4792
BXD75 m 8.1572 2.731 13.5179 2.7965
BXD77 f 9.2131 4.3181 17.6891 0.7371
BXD77 m 6.2983 4.3181 14.7743 -2.1777
BXD8 f 14.5485 2.731 19.9092 9.1878
BXD8 m 11.1636 2.731 16.5243 5.8029
BXD80 f 11.4468 2.731 16.8075 6.0861
BXD80 m 7.5389 2.731 12.8996 2.1782
BXD81 f 7.0093 2.731 12.37 1.6486
BXD81 m 6.6732 2.731 12.0339 1.3125
BXD84 f 13.5557 2.731 18.9164 8.195
BXD84 m 11.6799 2.731 17.0406 6.3192
BXD85 f 5.1117 4.3181 13.5877 -3.3643
BXD85 m 5.9826 4.3181 14.4586 -2.4934
BXD86 f 5.8617 2.731 11.2224 0.501
BXD86 m 7.8979 2.731 13.2586 2.5372
BXD87 f 9.4593 2.731 14.82 4.0986
BXD87 m 12.7636 2.731 18.1243 7.4029
BXD89 f 11.0005 2.731 16.3612 5.6398
BXD89 m 7.5822 2.731 12.9429 2.2215
BXD90 f 4.3109 3.5257 11.2316 -2.6097
BXD90 m 6.4128 3.5257 13.3334 -0.5079
BXD92 f 9.528 6.1067 21.5149 -2.4589
BXD92 m 9.1889 4.9861 18.9761 -0.5984
BXD96 f 8.0364 2.731 13.3971 2.6757
BXD96 m 8.0906 2.731 13.4513 2.7299
BXD97 f 9.4004 2.731 14.7611 4.0397
BXD97 m 16.1889 2.731 21.5496 10.8282
BXD98 f 11.249 3.5257 18.1696 4.3283
BXD98 m 6.1283 3.2642 12.5355 -0.279
C57BL/6J f 2.7745 2.731 8.1352 -2.5862
C57BL/6J m 5.5503 2.731 10.911 0.1896
DBA/2J f 16.2478 2.731 21.6085 10.8871
DBA/2J m 11.7934 2.731 17.1541 6.4327


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 5.2018 4.3181 13.6779 -3.2742
BXD100 both 11.9869 1.9311 15.7775 8.1963
BXD101 both 12.7633 2.332 17.3409 8.1857
BXD102 both 3.8374 1.9311 7.628 0.0468
BXD11 both 25.367 1.9311 29.1576 21.5764
BXD13 both 6.7873 1.9311 10.5778 2.9967
BXD14 both 10.8161 1.9311 14.6067 7.0255
BXD15 both 8.4603 1.9311 12.2509 4.6697
BXD16 both 5.2934 1.9311 9.084 1.5028
BXD18 both 3.2095 4.3181 11.6855 -5.2665
BXD19 both 4.0656 4.3181 12.5416 -4.4104
BXD2 both 9.4727 1.9311 13.2633 5.6821
BXD21 both 5.6231 1.9311 9.4137 1.8325
BXD27 both 14.5518 1.9311 18.3424 10.7613
BXD28 both 12.2652 1.9311 16.0558 8.4746
BXD31 both 11.4764 1.9311 15.2669 7.6858
BXD32 both 5.9161 1.9311 9.7067 2.1255
BXD34 both 18.2121 4.3181 26.6881 9.7361
BXD39 both 11.7639 1.9311 15.5545 7.9734
BXD40 both 5.4315 1.9311 9.2221 1.6409
BXD42 both 14.6741 1.9311 18.4647 10.8835
BXD43 both 16.1885 1.9311 19.979 12.3979
BXD44 both 8.8509 1.9311 12.6415 5.0603
BXD48 both 6.6507 1.9311 10.4413 2.8601
BXD49 both 8.7426 1.9311 12.5332 4.9521
BXD50 both 5.3678 1.9311 9.1583 1.5772
BXD51 both 10.0538 1.9311 13.8444 6.2632
BXD6 both 14.6747 1.9311 18.4653 10.8841
BXD61 both 9.3496 1.9311 13.1402 5.559
BXD62 both 9.8731 1.9311 13.6637 6.0825
BXD65 both 4.8764 2.2298 9.2533 0.4994
BXD66 both 9.7283 3.0533 15.7218 3.7349
BXD68 both 6.7177 2.7873 12.1889 1.2464
BXD69 both 6.2597 1.9311 10.0503 2.4691
BXD70 both 5.1623 1.9311 8.9529 1.3717
BXD73 both 6.4548 1.9311 10.2453 2.6642
BXD75 both 7.4986 1.9311 11.2891 3.708
BXD77 both 7.7557 3.0533 13.7492 1.7623
BXD8 both 12.856 1.9311 16.6466 9.0655
BXD80 both 9.4929 1.9311 13.2834 5.7023
BXD81 both 6.8413 1.9311 10.6318 3.0507
BXD84 both 12.6178 1.9311 16.4084 8.8272
BXD85 both 5.5471 3.0533 11.5406 -0.4463
BXD86 both 6.8798 1.9311 10.6704 3.0892
BXD87 both 11.1114 1.9311 14.902 7.3208
BXD89 both 9.2913 1.9311 13.0819 5.5008
BXD90 both 5.3618 2.493 10.2555 0.4682
BXD92 both 9.3584 3.9418 17.0959 1.6209
BXD96 both 8.0635 1.9311 11.8541 4.2729
BXD97 both 12.7946 1.9311 16.5852 9.0041
BXD98 both 8.6886 2.4023 13.4042 3.973
C57BL/6J both 4.1624 1.9311 7.953 0.3718
DBA/2J both 14.0206 1.9311 17.8112 10.23




  GWAS USING LINEAR MIXED MODELS