Project measure / variable:   Crusio1   groom_dur

ID, description, units MPD:62014   groom_dur   total duration of grooming, 20 min test   [s]  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-12wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Crusio1 - total duration of grooming, 20 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means71.73   s 53.26   s
Median of the strain means53.09   s 47.68   s
SD of the strain means± 79.65 ± 30.236
Coefficient of variation (CV)1.1104 0.5678
Min–max range of strain means11.976   –   573.0   s 13.496   –   175.2   s
Mean sample size per strain8.4   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 27195.9436 27195.9436 10.1794 0.0015
strain 52 1222218.4681 23504.2013 8.7976 < 0.0001
sex:strain 52 407484.5438 7836.2412 2.9331 < 0.0001
Residuals 804 2148025.7981 2671.6739


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 53.0 35.355   2   25.0 0.6671 28.0, 78.0 -0.24
BXD1 m 26.5 6.364   2   4.5 0.2401 22.0, 31.0 -0.88
BXD100 f 103.7 48.487   10 15.333 0.4677 29.04, 192.0 0.4
BXD100 m 86.81 40.004   10 12.65 0.4608 40.88, 167.2 1.11
BXD101 f 100.1 52.8   6 21.556 0.5275 19.76, 151.12 0.36
BXD101 m 56.57 48.422   8 17.12 0.856 10.72, 130.8 0.11
BXD102 f 11.976 5.8672   10 1.8554 0.4899 -0.75
BXD102 m 13.496 10.657   10 3.3701 0.7897 0.24, 34.96 -1.31
BXD11 f 175.1 49.183   10 15.553 0.2809 106.16, 269.44 1.3
BXD11 m 175.2 111.7   10 35.321 0.6375 66.0, 425.76 4.03
BXD13 f 42.92 23.955   10 7.5751 0.5581 12.24, 91.68 -0.36
BXD13 m 56.87 50.85   10 16.079 0.8941 0.12
BXD14 f 67.91 39.391   10 12.457 0.58 31.2, 152.08 -0.05
BXD14 m 61.01 45.974   10 14.538 0.7536 11.68, 152.32 0.26
BXD15 f 63.78 50.04   10 15.825 0.7847 1.44, 164.24 -0.1
BXD15 m 36.928 23.073   10 7.2962 0.6248 4.8, 73.52 -0.54
BXD16 f 47.736 33.438   10 10.574 0.7005 8.72, 106.64 -0.3
BXD16 m 34.944 28.263   10 8.9376 0.8088 2.8, 73.28 -0.61
BXD18 f 26.5 10.607   2   7.5 0.4002 19.0, 34.0 -0.57
BXD18 m 39.5 19.092   2   13.5 0.4833 26.0, 53.0 -0.45
BXD19 f 32.5 26.163   2   18.5 0.805 14.0, 51.0 -0.49
BXD19 m 95.5 53.03   2   37.5 0.5553 58.0, 133.0 1.4
BXD2 f 98.55 49.382   10 15.616 0.5011 35.44, 187.52 0.34
BXD2 m 66.55 91.71   10 29.0 1.378 10.72, 320.0 0.44
BXD21 f 47.616 46.184   10 14.605 0.9699 12.8, 157.44 -0.3
BXD21 m 19.736 12.382   10 3.9156 0.6274 1.36, 42.24 -1.11
BXD27 f 66.44 62.2   10 19.668 0.9362 -0.07
BXD27 m 58.3 64.5   10 20.396 1.1064 0.17
BXD28 f 60.46 33.046   10 10.45 0.5466 25.52, 135.2 -0.14
BXD28 m 131.8 74.18   10 23.459 0.5627 59.28, 268.0 2.6
BXD31 f 105.9 52.85   10 16.713 0.499 52.16, 194.88 0.43
BXD31 m 91.92 116.9   10 36.969 1.2719 20.8, 402.0 1.28
BXD32 f 42.488 14.878   10 4.705 0.3502 25.6, 73.76 -0.37
BXD32 m 51.51 41.715   10 13.191 0.8098 -0.06
BXD33 f 20.0 0.0   1   0.0 0.0 20.0, 20.0 -0.65
BXD33 m 41.0 0.0   1   0.0 0.0 41.0, 41.0 -0.41
BXD34 f 573.0 581.2   2   411.0 1.0144 162.0, 984.0 6.29
BXD34 m 58.5 38.891   2   27.5 0.6648 31.0, 86.0 0.17
BXD39 f 63.89 24.84   10 7.8551 0.3888 18.16, 99.12 -0.1
BXD39 m 87.49 45.954   10 14.532 0.5252 15.44, 181.6 1.13
BXD40 f 30.44 14.205   10 4.4919 0.4666 10.32, 52.16 -0.52
BXD40 m 27.548 8.9918   10 2.8434 0.3264 15.44, 44.48 -0.85
BXD42 f 49.84 23.969   10 7.5796 0.4809 7.6, 90.32 -0.27
BXD42 m 53.02 35.012   10 11.072 0.6604 23.28, 131.44 -0.01
BXD43 f 148.1 73.2   10 23.148 0.4943 41.52, 256.4 0.96
BXD43 m 98.64 51.9   10 16.413 0.5262 30.08, 167.76 1.5
BXD44 f 41.784 22.349   10 7.0673 0.5349 11.84, 81.6 -0.38
BXD44 m 46.984 38.654   10 12.224 0.8227 6.24, 111.2 -0.21
BXD48 f 53.17 62.54   10 19.778 1.1763 20.48, 226.32 -0.23
BXD48 m 27.896 22.509   10 7.1181 0.8069 5.12, 70.24 -0.84
BXD49 f 36.856 9.3472   10 2.9558 0.2536 23.04, 48.08 -0.44
BXD49 m 38.712 19.536   10 6.1778 0.5046 12.16, 68.32 -0.48
BXD50 f 26.36 14.527   10 4.5937 0.5511 4.24, 53.2 -0.57
BXD50 m 21.04 26.02   10 8.2283 1.2367 -1.07
BXD51 f 57.65 58.09   10 18.368 1.0076 7.12, 184.8 -0.18
BXD51 m 62.98 59.46   10 18.804 0.9442 3.44, 172.96 0.32
BXD6 f 122.3 173.2   10 54.76 1.4163 27.36, 608.48 0.63
BXD6 m 59.33 41.165   10 13.018 0.6939 18.72, 130.72 0.2
BXD61 f 104.4 63.44   10 20.061 0.6077 49.04, 210.48 0.41
BXD61 m 56.62 39.579   10 12.516 0.699 23.92, 159.76 0.11
BXD62 f 44.288 24.06   10 7.6084 0.5433 12.16, 84.96 -0.34
BXD62 m 63.75 53.76   10 17.001 0.8433 25.36, 167.84 0.35
BXD65 f 19.0 17.34   6 7.0789 0.9126 -0.66
BXD65 m 16.992 9.6226   10 3.0429 0.5663 3.04, 33.84 -1.2
BXD66 f 150.8 28.371   4 14.186 0.1882 129.68, 192.16 0.99
BXD66 m 77.9 26.996   4 13.498 0.3465 47.04, 104.4 0.82
BXD68 f 53.62 31.185   4 15.593 0.5816 21.12, 86.0 -0.23
BXD68 m 45.453 15.559   6 6.3521 0.3423 20.0, 66.8 -0.26
BXD69 f 30.92 21.969   10 6.9474 0.7105 5.12, 57.36 -0.51
BXD69 m 34.736 39.361   10 12.447 1.1331 -0.61
BXD70 f 19.376 15.739   10 4.977 0.8123 2.96, 61.52 -0.66
BXD70 m 15.064 23.094   10 7.303 1.5331 -1.26
BXD71 m 32.84 7.7499   2   5.48 0.236 27.36, 38.32 -0.68
BXD73 f 44.336 15.449   10 4.8853 0.3484 25.52, 74.16 -0.34
BXD73 m 36.48 18.341   10 5.8001 0.5028 19.2, 80.64 -0.55
BXD75 f 37.968 24.446   10 7.7306 0.6439 15.28, 92.08 -0.42
BXD75 m 46.112 36.354   10 11.496 0.7884 3.6, 121.28 -0.24
BXD77 f 112.6 61.5   4 30.75 0.546 38.24, 165.28 0.51
BXD77 m 60.9 18.689   4 9.3443 0.3069 36.64, 82.08 0.25
BXD8 f 98.22 38.419   10 12.149 0.3911 42.0, 165.2 0.33
BXD8 m 73.11 33.737   10 10.669 0.4614 21.84, 123.36 0.66
BXD80 f 69.1 29.925   10 9.4631 0.4331 41.2, 133.52 -0.03
BXD80 m 48.808 37.793   10 11.951 0.7743 19.76, 150.16 -0.15
BXD81 f 38.864 31.207   10 9.8687 0.803 11.04, 120.8 -0.41
BXD81 m 29.896 28.059   10 8.8731 0.9386 1.76, 97.04 -0.77
BXD84 f 50.34 32.029   10 10.128 0.6363 16.88, 100.72 -0.27
BXD84 m 47.68 26.489   10 8.3767 0.5556 11.92, 100.96 -0.18
BXD85 f 15.02 6.0636   4 3.0318 0.4037 8.72, 22.08 -0.71
BXD85 m 22.92 2.3392   4 1.1696 0.1021 20.88, 25.6 -1.0
BXD86 f 24.264 17.387   10 5.4981 0.7166 -0.6
BXD86 m 28.12 11.894   10 3.7611 0.423 18.8, 51.68 -0.83
BXD87 f 61.62 51.07   10 16.151 0.8288 8.64, 150.88 -0.13
BXD87 m 78.19 89.79   10 28.395 1.1484 19.68, 251.12 0.82
BXD89 f 24.328 16.882   10 5.3386 0.6939 4.16, 55.28 -0.6
BXD89 m 27.656 22.41   10 7.0866 0.8103 4.32, 76.0 -0.85
BXD90 f 21.893 11.409   6 4.6578 0.5211 5.12, 33.92 -0.63
BXD90 m 35.193 14.856   6 6.0651 0.4221 18.48, 60.24 -0.6
BXD92 f 84.08 71.39   2   50.48 0.8491 33.6, 134.56 0.16
BXD92 m 31.787 16.342   3 9.4348 0.5141 21.68, 50.64 -0.71
BXD96 f 57.4 20.326   10 6.4277 0.3541 34.24, 99.28 -0.18
BXD96 m 58.47 46.778   10 14.792 0.8 0.17
BXD97 f 76.55 43.988   10 13.91 0.5746 19.2, 144.8 0.06
BXD97 m 88.67 55.55   10 17.566 0.6264 10.8, 196.88 1.17
BXD98 f 93.61 33.158   6 13.537 0.3542 34.72, 127.12 0.27
BXD98 m 29.68 14.625   7 5.5277 0.4928 3.92, 47.44 -0.78
C57BL/6J f 18.168 12.326   10 3.8977 0.6784 -0.67
C57BL/6J m 25.576 9.1977   10 2.9086 0.3596 11.76, 41.12 -0.92
DBA/2J f 152.7 102.9   10 32.527 0.6738 11.52, 328.4 1.02
DBA/2J m 90.19 59.15   10 18.706 0.6559 19.92, 183.12 1.22


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 53.0 36.5491 124.7429 -18.7429
BXD1 m 26.5 36.5491 98.2429 -45.2429
BXD100 f 103.672 16.3453 135.7564 71.5876
BXD100 m 86.808 16.3453 118.8924 54.7236
BXD101 f 100.1067 21.1016 141.5275 58.6859
BXD101 m 56.57 18.2746 92.4415 20.6985
BXD102 f 11.976 16.3453 44.0604 -20.1084
BXD102 m 13.496 16.3453 45.5804 -18.5884
BXD11 f 175.1 16.3453 207.1844 143.0156
BXD11 m 175.22 16.3453 207.3044 143.1356
BXD13 f 42.92 16.3453 75.0044 10.8356
BXD13 m 56.872 16.3453 88.9564 24.7876
BXD14 f 67.912 16.3453 99.9964 35.8276
BXD14 m 61.008 16.3453 93.0924 28.9236
BXD15 f 63.776 16.3453 95.8604 31.6916
BXD15 m 36.928 16.3453 69.0124 4.8436
BXD16 f 47.736 16.3453 79.8204 15.6516
BXD16 m 34.944 16.3453 67.0284 2.8596
BXD18 f 26.5 36.5491 98.2429 -45.2429
BXD18 m 39.5 36.5491 111.2429 -32.2429
BXD19 f 32.5 36.5491 104.2429 -39.2429
BXD19 m 95.5 36.5491 167.2429 23.7571
BXD2 f 98.552 16.3453 130.6364 66.4676
BXD2 m 66.552 16.3453 98.6364 34.4676
BXD21 f 47.616 16.3453 79.7004 15.5316
BXD21 m 19.736 16.3453 51.8204 -12.3484
BXD27 f 66.436 16.3453 98.5204 34.3516
BXD27 m 58.296 16.3453 90.3804 26.2116
BXD28 f 60.456 16.3453 92.5404 28.3716
BXD28 m 131.836 16.3453 163.9204 99.7516
BXD31 f 105.908 16.3453 137.9924 73.8236
BXD31 m 91.916 16.3453 124.0004 59.8316
BXD32 f 42.488 16.3453 74.5724 10.4036
BXD32 m 51.512 16.3453 83.5964 19.4276
BXD34 f 573.0 36.5491 644.7429 501.2571
BXD34 m 58.5 36.5491 130.2429 -13.2429
BXD39 f 63.888 16.3453 95.9724 31.8036
BXD39 m 87.492 16.3453 119.5764 55.4076
BXD40 f 30.44 16.3453 62.5244 -1.6444
BXD40 m 27.548 16.3453 59.6324 -4.5364
BXD42 f 49.84 16.3453 81.9244 17.7556
BXD42 m 53.016 16.3453 85.1004 20.9316
BXD43 f 148.08 16.3453 180.1644 115.9956
BXD43 m 98.64 16.3453 130.7244 66.5556
BXD44 f 41.784 16.3453 73.8684 9.6996
BXD44 m 46.984 16.3453 79.0684 14.8996
BXD48 f 53.168 16.3453 85.2524 21.0836
BXD48 m 27.896 16.3453 59.9804 -4.1884
BXD49 f 36.856 16.3453 68.9404 4.7716
BXD49 m 38.712 16.3453 70.7964 6.6276
BXD50 f 26.36 16.3453 58.4444 -5.7244
BXD50 m 21.04 16.3453 53.1244 -11.0444
BXD51 f 57.648 16.3453 89.7324 25.5636
BXD51 m 62.976 16.3453 95.0604 30.8916
BXD6 f 122.272 16.3453 154.3564 90.1876
BXD6 m 59.328 16.3453 91.4124 27.2436
BXD61 f 104.384 16.3453 136.4684 72.2996
BXD61 m 56.624 16.3453 88.7084 24.5396
BXD62 f 44.288 16.3453 76.3724 12.2036
BXD62 m 63.752 16.3453 95.8364 31.6676
BXD65 f 19.0 21.1016 60.4208 -22.4208
BXD65 m 16.992 16.3453 49.0764 -15.0924
BXD66 f 150.76 25.8441 201.4899 100.0301
BXD66 m 77.9 25.8441 128.6299 27.1701
BXD68 f 53.62 25.8441 104.3499 2.8901
BXD68 m 45.4533 21.1016 86.8741 4.0325
BXD69 f 30.92 16.3453 63.0044 -1.1644
BXD69 m 34.736 16.3453 66.8204 2.6516
BXD70 f 19.376 16.3453 51.4604 -12.7084
BXD70 m 15.064 16.3453 47.1484 -17.0204
BXD73 f 44.336 16.3453 76.4204 12.2516
BXD73 m 36.48 16.3453 68.5644 4.3956
BXD75 f 37.968 16.3453 70.0524 5.8836
BXD75 m 46.112 16.3453 78.1964 14.0276
BXD77 f 112.64 25.8441 163.3699 61.9101
BXD77 m 60.9 25.8441 111.6299 10.1701
BXD8 f 98.22 16.3453 130.3044 66.1356
BXD8 m 73.112 16.3453 105.1964 41.0276
BXD80 f 69.096 16.3453 101.1804 37.0116
BXD80 m 48.808 16.3453 80.8924 16.7236
BXD81 f 38.864 16.3453 70.9484 6.7796
BXD81 m 29.896 16.3453 61.9804 -2.1884
BXD84 f 50.336 16.3453 82.4204 18.2516
BXD84 m 47.68 16.3453 79.7644 15.5956
BXD85 f 15.02 25.8441 65.7499 -35.7099
BXD85 m 22.92 25.8441 73.6499 -27.8099
BXD86 f 24.264 16.3453 56.3484 -7.8204
BXD86 m 28.12 16.3453 60.2044 -3.9644
BXD87 f 61.624 16.3453 93.7084 29.5396
BXD87 m 78.192 16.3453 110.2764 46.1076
BXD89 f 24.328 16.3453 56.4124 -7.7564
BXD89 m 27.656 16.3453 59.7404 -4.4284
BXD90 f 21.8933 21.1016 63.3141 -19.5275
BXD90 m 35.1933 21.1016 76.6141 -6.2275
BXD92 f 84.08 36.5491 155.8229 12.3371
BXD92 m 31.7867 29.8422 90.3645 -26.7912
BXD96 f 57.4 16.3453 89.4844 25.3156
BXD96 m 58.472 16.3453 90.5564 26.3876
BXD97 f 76.552 16.3453 108.6364 44.4676
BXD97 m 88.672 16.3453 120.7564 56.5876
BXD98 f 93.6133 21.1016 135.0341 52.1925
BXD98 m 29.68 19.5363 68.0282 -8.6682
C57BL/6J f 18.168 16.3453 50.2524 -13.9164
C57BL/6J m 25.576 16.3453 57.6604 -6.5084
DBA/2J f 152.656 16.3453 184.7404 120.5716
DBA/2J m 90.192 16.3453 122.2764 58.1076


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 39.75 25.8441 90.4799 -10.9799
BXD100 both 95.24 11.5578 117.9271 72.5529
BXD101 both 78.3383 13.9574 105.7356 50.9411
BXD102 both 12.736 11.5578 35.4231 -9.9511
BXD11 both 175.16 11.5578 197.8471 152.4729
BXD13 both 49.896 11.5578 72.5831 27.2089
BXD14 both 64.46 11.5578 87.1471 41.7729
BXD15 both 50.352 11.5578 73.0391 27.6649
BXD16 both 41.34 11.5578 64.0271 18.6529
BXD18 both 33.0 25.8441 83.7299 -17.7299
BXD19 both 64.0 25.8441 114.7299 13.2701
BXD2 both 82.552 11.5578 105.2391 59.8649
BXD21 both 33.676 11.5578 56.3631 10.9889
BXD27 both 62.366 11.5578 85.0531 39.6789
BXD28 both 96.146 11.5578 118.8331 73.4589
BXD31 both 98.912 11.5578 121.5991 76.2249
BXD32 both 47.0 11.5578 69.6871 24.3129
BXD34 both 315.75 25.8441 366.4799 265.0201
BXD39 both 75.69 11.5578 98.3771 53.0029
BXD40 both 28.994 11.5578 51.6811 6.3069
BXD42 both 51.428 11.5578 74.1151 28.7409
BXD43 both 123.36 11.5578 146.0471 100.6729
BXD44 both 44.384 11.5578 67.0711 21.6969
BXD48 both 40.532 11.5578 63.2191 17.8449
BXD49 both 37.784 11.5578 60.4711 15.0969
BXD50 both 23.7 11.5578 46.3871 1.0129
BXD51 both 60.312 11.5578 82.9991 37.6249
BXD6 both 90.8 11.5578 113.4871 68.1129
BXD61 both 80.504 11.5578 103.1911 57.8169
BXD62 both 54.02 11.5578 76.7071 31.3329
BXD65 both 17.996 13.3458 44.1928 -8.2008
BXD66 both 114.33 18.2746 150.2015 78.4585
BXD68 both 49.5367 16.6823 82.2827 16.7907
BXD69 both 32.828 11.5578 55.5151 10.1409
BXD70 both 17.22 11.5578 39.9071 -5.4671
BXD73 both 40.408 11.5578 63.0951 17.7209
BXD75 both 42.04 11.5578 64.7271 19.3529
BXD77 both 86.77 18.2746 122.6415 50.8985
BXD8 both 85.666 11.5578 108.3531 62.9789
BXD80 both 58.952 11.5578 81.6391 36.2649
BXD81 both 34.38 11.5578 57.0671 11.6929
BXD84 both 49.008 11.5578 71.6951 26.3209
BXD85 both 18.97 18.2746 54.8415 -16.9015
BXD86 both 26.192 11.5578 48.8791 3.5049
BXD87 both 69.908 11.5578 92.5951 47.2209
BXD89 both 25.992 11.5578 48.6791 3.3049
BXD90 both 28.5433 14.9211 57.8323 -0.7456
BXD92 both 57.9333 23.5923 104.2432 11.6235
BXD96 both 57.936 11.5578 80.6231 35.2489
BXD97 both 82.612 11.5578 105.2991 59.9249
BXD98 both 61.6467 14.3783 89.8702 33.4232
C57BL/6J both 21.872 11.5578 44.5591 -0.8151
DBA/2J both 121.424 11.5578 144.1111 98.7369




  GWAS USING LINEAR MIXED MODELS