Phenotype measure:   Crusio1   periphery_dist

ID, description, units MPD:62006   periphery_dist   distance run in thigmotaxis zone, 20 min test   [cm]
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-12wks
Procedure open field test
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
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Crusio1 - distance run in thigmotaxis zone, 20 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means6166.0   cm 5939.0   cm
Median of the strain means6152.0   cm 5868.0   cm
SD of the strain means± 1456.0 ± 1174.0
Coefficient of variation (CV)0.2362 0.1976
Min–max range of strain means2736.0   –   9906.0   cm 3666.0   –   8287.0   cm
Mean sample size per strain8.4   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 10840854.7754 10840854.7754 6.0621 0.014
strain 52 1221436575.1483 23489164.9067 13.1349 < 0.0001
sex:strain 52 136023612.57 2615838.7033 1.4628 0.0204
Residuals 804 1437791285.2821 1788297.6185


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 6785.0 288.5   2   204.0 0.0425 6581.0, 6989.0 0.43
BXD1 m 6184.0 2624.0   2   1856.0 0.4243 4329.0, 8040.0 0.21
BXD100 f 4192.0 1256.0   10 397.2 0.2996 3154.0, 7469.0 -1.36
BXD100 m 3666.0 508.2   10 160.7 0.1386 3004.0, 4617.0 -1.94
BXD101 f 6268.0 454.6   6 185.6 0.0725 5439.0, 6686.0 0.07
BXD101 m 5812.0 613.8   8 217.0 0.1056 4872.0, 6728.0 -0.11
BXD102 f 9100.0 1442.0   10 456.0 0.1585 7006.0, 12021.0 2.02
BXD102 m 8205.0 927.3   10 293.2 0.113 6705.0, 9662.0 1.93
BXD11 f 5226.0 1035.0   10 327.4 0.1981 3909.0, 7155.0 -0.65
BXD11 m 4658.0 934.0   10 295.4 0.2005 3027.0, 6122.0 -1.09
BXD13 f 6156.0 1345.0   10 425.2 0.2184 4461.0, 8104.0 -0.01
BXD13 m 6002.0 744.7   10 235.5 0.1241 4623.0, 6890.0 0.05
BXD14 f 4937.0 1078.0   10 341.0 0.2184 2593.0, 6185.0 -0.84
BXD14 m 4686.0 822.8   10 260.2 0.1756 3749.0, 6099.0 -1.07
BXD15 f 7357.0 2240.0   10 708.3 0.3045 2793.0, 10087.0 0.82
BXD15 m 7132.0 1224.0   10 387.1 0.1717 4843.0, 9168.0 1.02
BXD16 f 6987.0 1970.0   10 622.9 0.2819 4360.0, 10188.0 0.56
BXD16 m 5868.0 1049.0   10 331.6 0.1787 3866.0, 7722.0 -0.06
BXD18 f 9208.0 1170.0   2   827.5 0.1271 8381.0, 10036.0 2.09
BXD18 m 7122.0 1148.0   2   812.0 0.1612 6310.0, 7934.0 1.01
BXD19 f 9906.0 805.4   2   569.5 0.0813 9337.0, 10476.0 2.57
BXD19 m 6124.0 1540.0   2   1089.0 0.2515 5035.0, 7213.0 0.16
BXD2 f 6001.0 1513.0   10 478.3 0.252 3588.0, 8517.0 -0.11
BXD2 m 5973.0 1431.0   10 452.4 0.2395 3526.0, 8100.0 0.03
BXD21 f 6048.0 1154.0   10 364.8 0.1907 4734.0, 8338.0 -0.08
BXD21 m 5764.0 1187.0   10 375.4 0.2059 4112.0, 7722.0 -0.15
BXD27 f 4707.0 1415.0   10 447.5 0.3007 2445.0, 6922.0 -1.0
BXD27 m 5481.0 1017.0   10 321.6 0.1855 3374.0, 6490.0 -0.39
BXD28 f 4637.0 538.9   10 170.4 0.1162 3497.0, 5408.0 -1.05
BXD28 m 4009.0 1289.0   10 407.7 0.3216 2592.0, 6895.0 -1.64
BXD31 f 5246.0 931.5   10 294.6 0.1776 3809.0, 6693.0 -0.63
BXD31 m 5148.0 1346.0   10 425.8 0.2615 2236.0, 6849.0 -0.67
BXD32 f 8136.0 1146.0   10 362.3 0.1408 6849.0, 10874.0 1.35
BXD32 m 8287.0 951.7   10 301.0 0.1148 6546.0, 9775.0 2.0
BXD33 f 5374.0 0.0   1   0.0 0.0 5374.0, 5374.0 -0.54
BXD33 m 5182.0 0.0   1   0.0 0.0 5182.0, 5182.0 -0.65
BXD34 f 4170.0 958.1   2   677.5 0.2297 3493.0, 4848.0 -1.37
BXD34 m 4118.0 28.991   2   20.5 0.007 4098.0, 4139.0 -1.55
BXD39 f 5377.0 1077.0   10 340.5 0.2003 3816.0, 7572.0 -0.54
BXD39 m 4749.0 1040.0   10 328.9 0.219 2985.0, 5734.0 -1.01
BXD40 f 5474.0 3250.0   10 1028.0 0.5938 23.0, 9495.0 -0.47
BXD40 m 6215.0 1603.0   10 506.8 0.2579 3427.0, 8886.0 0.24
BXD42 f 6924.0 1331.0   10 420.8 0.1922 5170.0, 9664.0 0.52
BXD42 m 7030.0 1116.0   10 353.0 0.1588 5419.0, 8806.0 0.93
BXD43 f 4507.0 1079.0   10 341.3 0.2395 3033.0, 6751.0 -1.14
BXD43 m 4518.0 858.1   10 271.3 0.1899 3411.0, 6264.0 -1.21
BXD44 f 6380.0 782.3   10 247.4 0.1226 5308.0, 7946.0 0.15
BXD44 m 5860.0 1321.0   10 417.8 0.2255 3813.0, 8089.0 -0.07
BXD48 f 5366.0 1462.0   10 462.4 0.2725 3398.0, 8298.0 -0.55
BXD48 m 5645.0 1009.0   10 319.1 0.1788 4404.0, 7661.0 -0.25
BXD49 f 6147.0 1161.0   10 367.2 0.1889 4681.0, 7968.0 -0.01
BXD49 m 5236.0 1158.0   10 366.2 0.2212 3735.0, 7843.0 -0.6
BXD50 f 8740.0 1600.0   10 505.8 0.183 6603.0, 12300.0 1.77
BXD50 m 6349.0 2004.0   10 633.7 0.3156 2644.0, 9253.0 0.35
BXD51 f 7224.0 1019.0   10 322.3 0.1411 5647.0, 8971.0 0.73
BXD51 m 6969.0 1314.0   10 415.5 0.1886 5436.0, 9587.0 0.88
BXD6 f 6070.0 1083.0   10 342.4 0.1784 4149.0, 8021.0 -0.07
BXD6 m 5773.0 1094.0   10 345.9 0.1895 4909.0, 8382.0 -0.14
BXD61 f 6174.0 937.2   10 296.4 0.1518 5201.0, 8034.0 0.01
BXD61 m 7700.0 1164.0   10 368.2 0.1512 5899.0, 9134.0 1.5
BXD62 f 4975.0 1973.0   10 623.9 0.3966 1030.0, 7179.0 -0.82
BXD62 m 3902.0 1723.0   10 544.7 0.4415 102.0, 6493.0 -1.74
BXD65 f 7334.0 1093.0   6 446.1 0.149 6139.0, 8829.0 0.8
BXD65 m 7271.0 1062.0   10 335.8 0.146 5676.0, 8820.0 1.14
BXD66 f 4390.0 1072.0   4 536.2 0.2443 3431.0, 5706.0 -1.22
BXD66 m 4583.0 315.6   4 157.8 0.0689 4117.0, 4778.0 -1.16
BXD68 f 6729.0 1056.0   4 527.9 0.1569 5303.0, 7820.0 0.39
BXD68 m 7047.0 1463.0   6 597.2 0.2076 5297.0, 9648.0 0.94
BXD69 f 7040.0 1198.0   10 378.8 0.1702 5499.0, 9146.0 0.6
BXD69 m 5884.0 1874.0   10 592.5 0.3184 1788.0, 8918.0 -0.05
BXD70 f 5798.0 1251.0   10 395.5 0.2157 3586.0, 7390.0 -0.25
BXD70 m 5893.0 1170.0   10 369.9 0.1985 3410.0, 7500.0 -0.04
BXD71 m 8054.0 1872.0   2   1324.0 0.2324 6730.0, 9377.0 1.8
BXD73 f 7135.0 980.8   10 310.2 0.1375 5878.0, 9135.0 0.67
BXD73 m 6997.0 648.5   10 205.1 0.0927 6066.0, 7845.0 0.9
BXD75 f 4636.0 1732.0   10 547.8 0.3736 1676.0, 7244.0 -1.05
BXD75 m 4890.0 851.1   10 269.1 0.1741 3847.0, 6298.0 -0.89
BXD77 f 2736.0 755.3   4 377.6 0.276 1890.0, 3565.0 -2.36
BXD77 m 4143.0 952.2   4 476.1 0.2298 3303.0, 5180.0 -1.53
BXD8 f 4241.0 1121.0   10 354.6 0.2644 2369.0, 5651.0 -1.32
BXD8 m 5282.0 770.2   10 243.5 0.1458 4156.0, 6385.0 -0.56
BXD80 f 6641.0 1385.0   10 437.9 0.2085 4434.0, 8679.0 0.33
BXD80 m 7399.0 1245.0   10 393.7 0.1683 5582.0, 9166.0 1.24
BXD81 f 5371.0 1379.0   10 436.1 0.2567 3460.0, 7726.0 -0.55
BXD81 m 5362.0 1949.0   10 616.3 0.3635 2084.0, 8428.0 -0.49
BXD84 f 4480.0 1097.0   10 347.0 0.2449 2980.0, 6159.0 -1.16
BXD84 m 5355.0 1083.0   10 342.6 0.2023 3476.0, 6595.0 -0.5
BXD85 f 6022.0 1093.0   4 546.6 0.1815 4614.0, 7284.0 -0.1
BXD85 m 5559.0 2020.0   4 1010.0 0.3633 2950.0, 7288.0 -0.32
BXD86 f 6361.0 1589.0   10 502.4 0.2497 4398.0, 8668.0 0.13
BXD86 m 5926.0 1269.0   10 401.2 0.2141 3687.0, 7639.0 -0.01
BXD87 f 6366.0 1897.0   10 599.8 0.298 4224.0, 10304.0 0.14
BXD87 m 5000.0 1044.0   10 330.1 0.2088 3405.0, 6411.0 -0.8
BXD89 f 6308.0 849.4   10 268.6 0.1347 4785.0, 7753.0 0.1
BXD89 m 6461.0 1117.0   10 353.2 0.1729 5342.0, 8860.0 0.44
BXD90 f 6360.0 485.5   6 198.2 0.0763 5674.0, 7033.0 0.13
BXD90 m 6653.0 1047.0   6 427.5 0.1574 5049.0, 7915.0 0.61
BXD92 f 4770.0 1567.0   2   1108.0 0.3285 3662.0, 5878.0 -0.96
BXD92 m 6415.0 1014.0   3 585.3 0.158 5251.0, 7106.0 0.41
BXD96 f 6543.0 1262.0   10 399.2 0.1929 4379.0, 8385.0 0.26
BXD96 m 5220.0 1544.0   10 488.2 0.2958 2439.0, 7958.0 -0.61
BXD97 f 5360.0 1555.0   10 491.7 0.2901 2402.0, 7820.0 -0.55
BXD97 m 5145.0 1321.0   10 417.6 0.2566 3149.0, 7025.0 -0.68
BXD98 f 8692.0 1339.0   6 546.5 0.154 6980.0, 9966.0 1.74
BXD98 m 8208.0 1917.0   7 724.5 0.2336 5330.0, 10488.0 1.93
C57BL/6J f 7753.0 1872.0   10 591.9 0.2414 5669.0, 11800.0 1.09
C57BL/6J m 6891.0 1914.0   10 605.3 0.2778 4448.0, 10983.0 0.81
DBA/2J f 8073.0 1532.0   10 484.4 0.1897 5800.0, 10854.0 1.31
DBA/2J m 7638.0 1905.0   10 602.4 0.2494 5078.0, 11878.0 1.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 6785.0 945.5944 8641.1252 4928.8748
BXD1 m 6184.5 945.5944 8040.6252 4328.3748
BXD100 f 4191.9 422.8827 5021.9844 3361.8156
BXD100 m 3666.2 422.8827 4496.2844 2836.1156
BXD101 f 6268.3333 545.9392 7339.9677 5196.6989
BXD101 m 5811.875 472.7972 6739.9376 4883.8124
BXD102 f 9100.3 422.8827 9930.3844 8270.2156
BXD102 m 8205.3 422.8827 9035.3844 7375.2156
BXD11 f 5226.2 422.8827 6056.2844 4396.1156
BXD11 m 4657.8 422.8827 5487.8844 3827.7156
BXD13 f 6156.2 422.8827 6986.2844 5326.1156
BXD13 m 6002.5 422.8827 6832.5844 5172.4156
BXD14 f 4937.0 422.8827 5767.0844 4106.9156
BXD14 m 4685.8 422.8827 5515.8844 3855.7156
BXD15 f 7357.1 422.8827 8187.1844 6527.0156
BXD15 m 7131.6 422.8827 7961.6844 6301.5156
BXD16 f 6986.7 422.8827 7816.7844 6156.6156
BXD16 m 5867.6 422.8827 6697.6844 5037.5156
BXD18 f 9208.5 945.5944 11064.6252 7352.3748
BXD18 m 7122.0 945.5944 8978.1252 5265.8748
BXD19 f 9906.5 945.5944 11762.6252 8050.3748
BXD19 m 6124.0 945.5944 7980.1252 4267.8748
BXD2 f 6001.2 422.8827 6831.2844 5171.1156
BXD2 m 5972.7 422.8827 6802.7844 5142.6156
BXD21 f 6048.1 422.8827 6878.1844 5218.0156
BXD21 m 5764.3 422.8827 6594.3844 4934.2156
BXD27 f 4707.0 422.8827 5537.0844 3876.9156
BXD27 m 5480.8 422.8827 6310.8844 4650.7156
BXD28 f 4636.7 422.8827 5466.7844 3806.6156
BXD28 m 4009.2 422.8827 4839.2844 3179.1156
BXD31 f 5246.5 422.8827 6076.5844 4416.4156
BXD31 m 5148.1 422.8827 5978.1844 4318.0156
BXD32 f 8135.6 422.8827 8965.6844 7305.5156
BXD32 m 8287.4 422.8827 9117.4844 7457.3156
BXD34 f 4170.5 945.5944 6026.6252 2314.3748
BXD34 m 4118.5 945.5944 5974.6252 2262.3748
BXD39 f 5377.0 422.8827 6207.0844 4546.9156
BXD39 m 4749.4 422.8827 5579.4844 3919.3156
BXD40 f 5473.7 422.8827 6303.7844 4643.6156
BXD40 m 6215.3 422.8827 7045.3844 5385.2156
BXD42 f 6924.1 422.8827 7754.1844 6094.0156
BXD42 m 7030.1 422.8827 7860.1844 6200.0156
BXD43 f 4506.9 422.8827 5336.9844 3676.8156
BXD43 m 4518.0 422.8827 5348.0844 3687.9156
BXD44 f 6379.9 422.8827 7209.9844 5549.8156
BXD44 m 5860.4 422.8827 6690.4844 5030.3156
BXD48 f 5366.2 422.8827 6196.2844 4536.1156
BXD48 m 5645.0 422.8827 6475.0844 4814.9156
BXD49 f 6147.1 422.8827 6977.1844 5317.0156
BXD49 m 5236.3 422.8827 6066.3844 4406.2156
BXD50 f 8740.4 422.8827 9570.4844 7910.3156
BXD50 m 6349.3 422.8827 7179.3844 5519.2156
BXD51 f 7223.8 422.8827 8053.8844 6393.7156
BXD51 m 6968.8 422.8827 7798.8844 6138.7156
BXD6 f 6069.7 422.8827 6899.7844 5239.6156
BXD6 m 5772.6 422.8827 6602.6844 4942.5156
BXD61 f 6174.2 422.8827 7004.2844 5344.1156
BXD61 m 7700.5 422.8827 8530.5844 6870.4156
BXD62 f 4975.1 422.8827 5805.1844 4145.0156
BXD62 m 3901.6 422.8827 4731.6844 3071.5156
BXD65 f 7334.0 545.9392 8405.6344 6262.3656
BXD65 m 7271.2 422.8827 8101.2844 6441.1156
BXD66 f 4389.75 668.6362 5702.2287 3077.2713
BXD66 m 4582.75 668.6362 5895.2287 3270.2713
BXD68 f 6729.0 668.6362 8041.4787 5416.5213
BXD68 m 7047.0 545.9392 8118.6344 5975.3656
BXD69 f 7040.2 422.8827 7870.2844 6210.1156
BXD69 m 5884.5 422.8827 6714.5844 5054.4156
BXD70 f 5798.4 422.8827 6628.4844 4968.3156
BXD70 m 5892.6 422.8827 6722.6844 5062.5156
BXD73 f 7135.1 422.8827 7965.1844 6305.0156
BXD73 m 6996.8 422.8827 7826.8844 6166.7156
BXD75 f 4636.0 422.8827 5466.0844 3805.9156
BXD75 m 4889.6 422.8827 5719.6844 4059.5156
BXD77 f 2736.5 668.6362 4048.9787 1424.0213
BXD77 m 4142.75 668.6362 5455.2287 2830.2713
BXD8 f 4240.8 422.8827 5070.8844 3410.7156
BXD8 m 5282.0 422.8827 6112.0844 4451.9156
BXD80 f 6640.9 422.8827 7470.9844 5810.8156
BXD80 m 7398.9 422.8827 8228.9844 6568.8156
BXD81 f 5370.8 422.8827 6200.8844 4540.7156
BXD81 m 5361.7 422.8827 6191.7844 4531.6156
BXD84 f 4479.8 422.8827 5309.8844 3649.7156
BXD84 m 5355.1 422.8827 6185.1844 4525.0156
BXD85 f 6022.0 668.6362 7334.4787 4709.5213
BXD85 m 5559.0 668.6362 6871.4787 4246.5213
BXD86 f 6361.4 422.8827 7191.4844 5531.3156
BXD86 m 5925.5 422.8827 6755.5844 5095.4156
BXD87 f 6366.0 422.8827 7196.0844 5535.9156
BXD87 m 5000.0 422.8827 5830.0844 4169.9156
BXD89 f 6307.6 422.8827 7137.6844 5477.5156
BXD89 m 6460.8 422.8827 7290.8844 5630.7156
BXD90 f 6359.8333 545.9392 7431.4677 5288.1989
BXD90 m 6653.3333 545.9392 7724.9677 5581.6989
BXD92 f 4770.0 945.5944 6626.1252 2913.8748
BXD92 m 6414.6667 772.0746 7930.1865 4899.1468
BXD96 f 6543.0 422.8827 7373.0844 5712.9156
BXD96 m 5219.8 422.8827 6049.8844 4389.7156
BXD97 f 5359.8 422.8827 6189.8844 4529.7156
BXD97 m 5145.4 422.8827 5975.4844 4315.3156
BXD98 f 8691.8333 545.9392 9763.4677 7620.1989
BXD98 m 8207.8571 505.4415 9199.9978 7215.7165
C57BL/6J f 7752.7 422.8827 8582.7844 6922.6156
C57BL/6J m 6891.0 422.8827 7721.0844 6060.9156
DBA/2J f 8072.6 422.8827 8902.6844 7242.5156
DBA/2J m 7638.4 422.8827 8468.4844 6808.3156


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 6484.75 668.6362 7797.2287 5172.2713
BXD100 both 3929.05 299.0232 4516.0083 3342.0917
BXD101 both 6040.1042 361.1048 6748.9237 5331.2846
BXD102 both 8652.8 299.0232 9239.7583 8065.8417
BXD11 both 4942.0 299.0232 5528.9583 4355.0417
BXD13 both 6079.35 299.0232 6666.3083 5492.3917
BXD14 both 4811.4 299.0232 5398.3583 4224.4417
BXD15 both 7244.35 299.0232 7831.3083 6657.3917
BXD16 both 6427.15 299.0232 7014.1083 5840.1917
BXD18 both 8165.25 668.6362 9477.7287 6852.7713
BXD19 both 8015.25 668.6362 9327.7287 6702.7713
BXD2 both 5986.95 299.0232 6573.9083 5399.9917
BXD21 both 5906.2 299.0232 6493.1583 5319.2417
BXD27 both 5093.9 299.0232 5680.8583 4506.9417
BXD28 both 4322.95 299.0232 4909.9083 3735.9917
BXD31 both 5197.3 299.0232 5784.2583 4610.3417
BXD32 both 8211.5 299.0232 8798.4583 7624.5417
BXD34 both 4144.5 668.6362 5456.9787 2832.0213
BXD39 both 5063.2 299.0232 5650.1583 4476.2417
BXD40 both 5844.5 299.0232 6431.4583 5257.5417
BXD42 both 6977.1 299.0232 7564.0583 6390.1417
BXD43 both 4512.45 299.0232 5099.4083 3925.4917
BXD44 both 6120.15 299.0232 6707.1083 5533.1917
BXD48 both 5505.6 299.0232 6092.5583 4918.6417
BXD49 both 5691.7 299.0232 6278.6583 5104.7417
BXD50 both 7544.85 299.0232 8131.8083 6957.8917
BXD51 both 7096.3 299.0232 7683.2583 6509.3417
BXD6 both 5921.15 299.0232 6508.1083 5334.1917
BXD61 both 6937.35 299.0232 7524.3083 6350.3917
BXD62 both 4438.35 299.0232 5025.3083 3851.3917
BXD65 both 7302.6 345.2823 7980.3611 6624.8389
BXD66 both 4486.25 472.7972 5414.3126 3558.1874
BXD68 both 6888.0 431.6028 7735.2014 6040.7986
BXD69 both 6462.35 299.0232 7049.3083 5875.3917
BXD70 both 5845.5 299.0232 6432.4583 5258.5417
BXD73 both 7065.95 299.0232 7652.9083 6478.9917
BXD75 both 4762.8 299.0232 5349.7583 4175.8417
BXD77 both 3439.625 472.7972 4367.6876 2511.5624
BXD8 both 4761.4 299.0232 5348.3583 4174.4417
BXD80 both 7019.9 299.0232 7606.8583 6432.9417
BXD81 both 5366.25 299.0232 5953.2083 4779.2917
BXD84 both 4917.45 299.0232 5504.4083 4330.4917
BXD85 both 5790.5 472.7972 6718.5626 4862.4374
BXD86 both 6143.45 299.0232 6730.4083 5556.4917
BXD87 both 5683.0 299.0232 6269.9583 5096.0417
BXD89 both 6384.2 299.0232 6971.1583 5797.2417
BXD90 both 6506.5833 386.0373 7264.3433 5748.8234
BXD92 both 5592.3333 610.3786 6790.457 4394.2097
BXD96 both 5881.4 299.0232 6468.3583 5294.4417
BXD97 both 5252.6 299.0232 5839.5583 4665.6417
BXD98 both 8449.8452 371.9949 9180.041 7719.6495
C57BL/6J both 7321.85 299.0232 7908.8083 6734.8917
DBA/2J both 7855.5 299.0232 8442.4583 7268.5417




  GWAS USING LINEAR MIXED MODELS